Pregenerated sensors for ZGPAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027582Ensembl transcript IDs: ENSMUST00000029105.12, ENSMUST00000108807.9, ENSMUST00000116366.9, ENSMUST00000156258.2
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCCCTGGGCAGCTGCCGTGGTGGGAAGGCAGAGTTGGGTACCTaGGACCTGGTGCTGCCCCTGGACATCTCTAGCCAGCGTGGATGC | + |
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Preference number: 1 (lower is better) Translates to: GALGSCRGGKAELGT*DLVLPLDISSQRGC Trigger: GCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCACCACGGCAGCTGCCCAGGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | GCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGGTGCAGCTCATaGAGTCTGGTGTCAGACTTGCTGAGGGAGCAGAGGTGGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: AGRGAMLERGPRCSS*SLVSDLLREQRWVC Trigger: ACAGACCCACCTCTGCTCCCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | TCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGGTaGAGCTCATGCAGTCTGGTGTCAGACTTGCTGAGGGAGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SMLAGRGAMLERGPR*SSCSLVSDLLREQR Trigger: CCTCTGCTCCCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR TCA 90 bp | ACCCAGAGAGCTAGTGGGGCTGAAGGCACTGGTGGCCTCATCCTGTaGAACAGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TQRASGAEGTGGLIL*NREESPRPPGICCL Trigger: CAAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTTTCACAGGATGAGGCCACCAGTGCCTTCAGCCCCACTAGCTCTCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | GCAGCCCAGTTTGCTGCCTCTGAGCTCTCTTCCTGTGGCAGGCTGTaGACAGTGCCCATAGCCAAAGGAGCAGGGAGAAGCAGCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: AAQFAASELSSCGRL*TVPIAKGAGRSSPG Trigger: TCCTGGGCTGCTTCTCCCTGCTCCTTTGGCTATGGGCACTGTGCACAGCCTGCCACAGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | GCTGCCGTGGTGGGAAGGCAGAGTTGGGTACCTGAGACCTGGTGCTaGCCCTGGACATCTCTAGCCAGCGTGGATGCAGAAGATCCATGC | + |
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Preference number: 1 (lower is better) Translates to: AAVVGRQSWVPETWC*PWTSLASVDAEDPC Trigger: GCATGGATCTTCTGCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCACCACGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 90 bp | TGGGCAGCTGCCGTGGTGGGAAGGCAGAGTTGGGTACCTGAGACCTaGTGCTGCCCCTGGACATCTCTAGCCAGCGTGGATGCAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: WAAAVVGRQSWVPET*CCPWTSLASVDAED Trigger: ATCTTCTGCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCACCACGGCAGCTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | TCCAGCCCACACCACAGGGCTAGCAGCCAGGCTGGCCCTGGGAATTaGAGCCAGCCCCACATTGGAATAAGTGGCCTCAGAGCTAGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: SSPHHRASSQAGPGN*SQPHIGISGLRASR Trigger: TCTACTAGCTCTGAGGCCACTTATTCCAATGTGGGGCTGGCTGCAATTCCCAGGGCCAGCCTGGCTGCTAGCCCTGTGGTGTGGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | TCTTGGACCCTAGACAGAGGCAGTGGCCTCATTTGGTACTCCCACTaGCCACCTGTCTACTCCCAGGACCTACACAGATCCCTGTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: SWTLDRGSGLIWYSH*PPVYSQDLHRSLCP Trigger: GGGACACAGGGATCTGTGTAGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAGGGTCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 90 bp | GCTGAGGGAGCAGAGGTGGGTCTGTCTCAGCAGTGGCATTTCCACTaGTACCAAACTGTCCTGCAGCCCAGTTTGCTGCCTCTGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AEGAEVGLSQQWHFH*YQTVLQPSLLPLSS Trigger: AGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | ACTTCCTGTGTTTCTCAGAGCACCTCCCAGCAGCCACACAGCTCTTaGGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCAT | + |
|
Preference number: 1 (lower is better) Translates to: TSCVSQSTSQQPHSS*AVAPTVSALLTPHH Trigger: ATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCTGAGAAACACAGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 90 bp | TTAGCCTTCTGCTGCAATTCTTGGCAGCCTTGCTCTGTCCCTTTGTaGTTCTGGATGCAGGCATATTCGGCCCCAGGACCAAGCCTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LAFCCNSWQPCSVPL*FWMQAYSAPGPSLA Trigger: TGCCAGGCTTGGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 90 bp | GGATTTGCTGCTTGGCCCTGTCTAGGACAGCCAGGAAGATCTTTGTaGGCTGCTGGTGACGCCTCACCTCACTTCCTGTGTTTCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GFAAWPCLGQPGRSL*AAGDASPHFLCFSE Trigger: CTCTGAGAAACACAGGAAGTGAGGTGAGGCGTCACCAGCAGCCCACAAAGATCTTCCTGGCTGTCCTAGACAGGGCCAAGCAGCAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 90 bp | TGCAGCTCATGCAGTCTGGTGTCAGACTTGCTGAGGGAGCAGAGGTaGGTCTGTCTCAGCAGTGGCATTTCCACTGGTACCAAACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CSSCSLVSDLLREQR*VCLSSGISTGTKLS Trigger: GGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 90 bp | TCACTCCCAAGCGGCAGACTTGTTCTCCCATCCTGCAGGTTCAGCTaGTCTGTGACGGGTCTTGGGTCTCTTCTTTTAGGCTTGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: SLPSGRLVLPSCRFS*SVTGLGSLLLGLQT Trigger: GGTTTGCAAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGACCAGCTGAACCTGCAGGATGGGAGAACAAGTCTGCCGCTTGGGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR TCA 90 bp | CTGGTAGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTaGTGTCCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: LVGGLGGQISVQNQP*CPTSTQQCSHSRLT Trigger: TGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCTACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| 3UTR TCA 90 bp | GGTGTTTCCATCTCACACACCCTACCTGCTTGTGAGTACTGGGACTaGAGAGCCACCTTAGGTTCTTACCCACTTGGTCAGAGAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GVSISHTLPACEYWD*RATLGSYPLGQRRE Trigger: TTCCCTTCTCTGACCAAGTGGGTAAGAACCTAAGGTGGCTCTTCAGTCCCAGTACTCACAAGCAGGTAGGGTGTGTGAGATGGAAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR TCA 90 bp | TCTCTTCTTTTAGGCTTGCAAACCCTAGAGTATAGGACGTCCATCTaGGTAGCTGGGATCACCTTAGCCTTCTGCTGCAATTCTTGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SLLLGLQTLEYRTSI*VAGITLAFCCNSWQ Trigger: CTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCCAGCTACTCAGATGGACGTCCTATACTCTAGGGTTTGCAAGCCTAAAAGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGAAGATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGTGTCCCCAGAAATCCTaGAGCCAGCTGAGTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: MQKIHASRPWGYAGAWASCPQKS*SQLSLH Trigger: GTGGAGACTCAGCTGGCTTCAGGATTTCTGGGGACA...CGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGATCTTCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGAAGATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGCAGCTCTTGCGCAGTTaGTCCCACAGTCTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: MQKIHASRPWGYAGAWASQLLRS*SHSLCS Trigger: AGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTG...CGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGATCTTCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACCTCCCAGCAGCCACACAGCTCTTGCGCAGTTGCTCCCACAGTCTCTGCACCCTACCTGCTTGTaGGTACTGGGACTGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RAPPSSHTALAQLLPQSLHPTCL*VLGLKS Trigger: GCTCTTCAGTCCCAGTACTCACAAGCAGGTAGGGTG...CAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGGTGGCCAAAAACCAGAAATaGACCCCAAACCCACCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QKIHASRPWGYAGAWASVAKNQK*TPNPPK Trigger: CTTGGGTGGGTTTGGGGTTCATTTCTGGTTTTTGGC...CACCGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGATCTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCAGAAGATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCATCCTAAGAAGGGGCTaGTTCCTCTTCCAGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WMQKIHASRPWGYAGAWAILRRG*FLFQVL Trigger: CAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGAT...GGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGATCTTCTGCATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 90 bp | CACTTCCTGTGTTTCTCAGAGCACCTCCCAGCAGCCACACAGCTCTaGCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: HFLCFSEHLPAATQL*RSCSHSLCSPHTSS Trigger: TGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCTGAGAAACACAGGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 90 bp | CGGGGATTTGCTGCTTGGCCCTGTCTAGGACAGCCAGGAAGATCTTaGTGGGCTGCTGGTGACGCCTCACCTCACTTCCTGTGTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: RGFAAWPCLGQPGRS*WAAGDASPHFLCFS Trigger: TGAGAAACACAGGAAGTGAGGTGAGGCGTCACCAGCAGCCCACAAAGATCTTCCTGGCTGTCCTAGACAGGGCCAAGCAGCAAATCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACCCCTAGACAGAGGCAGTaGCCTCATTTGGTACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ALLCPFVLLDAGIFGPRTPRQRQ*PHLVLP Trigger: TGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAGG...GGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 90 bp | GTGTTTCTCAGAGCACCTCCCAGCAGCCACACAGCTCTTGCGCAGTaGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: VFLRAPPSSHTALAQ*LPQSLLSSHLIMAN Trigger: ATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCTGAGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTTCTGCCAAGGCAGTTTaGAGCTGGGTCCCAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TRLIKGHPKKGLVPLPGASAKAV*SWVPGL Trigger: GAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGA...AGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| 3UTR-3UTR CCA 90 bp | GACACTGGTAGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCTGCCAAGGCAGTTTaGAGCTGGGTCCCAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: DTGRWAWWADKCSKSALMSAKAV*SWVPGL Trigger: GAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGA...CATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCTACCAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| 3UTR CAA 90 bp | AGTAGCTGGGATCACCTTAGCCTTCTGCTGCAATTCTTGGCAGCCTaGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSWDHLSLLLQFLAA*LCPFVLLDAGIFGP Trigger: GGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCCAGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCATCCTGTGAAACAGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTTGGTGAACAAAGCAGGTaGACTGGATGGATTATCGTG | + |
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Preference number: 2 (lower is better) Translates to: PHPVKQGREPEATGDLLLGEQSR*TGWIIV Trigger: CACGATAATCCATCCAGTTCACCTGCTTTGTTCACC...AAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTTTCACAGGATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACCTCACACCTCATCATaGCTAATGCTATCACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: QPCSVPLCFWMQAYSAPGPHTSS*LMLSLG Trigger: GCCTAGTGATAGCATTAGCCATGATGAGGTGTGAGG...TCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCTTCTGCTGCAATTCTTGGCAGCCTTGCTCTGTCCCTTTGTGCTTCTGGCAGCCAGCCCCACATTaGAATAAGTGGCCTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LAFCCNSWQPCSVPLCFWQPAPH*NKWPQS Trigger: GCTCTGAGGCCACTTATTCCAATGTGGGGCTGGCTG...CCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 90 bp | GTCCATCTGAGTAGCTGGGATCACCTTAGCCTTCTGCTGCAATTCTaGGCAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATA | + |
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Preference number: 2 (lower is better) Translates to: VHLSSWDHLSLLLQF*AALLCPFVLLDAGI Trigger: TATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCCAGCTACTCAGATGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAAAGGCAGTTTGGAGCTaGGTCCCAGGGCTCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: AWWADKCSKSALMSHLYSKAVWS*VPGLYP Trigger: TGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTT...TGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCAAAGGCAGTTTGGAGCTaGGTCCCAGGGCTCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: WWADKCSKSALMSHLYSAKAVWS*VPGLYP Trigger: TGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTT...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGATCCTAAGAAGGGGCTaGTTCCTCTTCCAGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PTSTQQCSHSRLTRLIKGILRRG*FLFQVL Trigger: CAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGAT...CCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGCTGGTCTGTGACGGGTCTTGGGTCTCTTCTTTTAGGCTTGCAAACCCTACTGGTAGGTGGGCTTaGTGGGCAGATAAGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: VQLVCDGSWVSSFRLANPTGRWA*WADKCS Trigger: TGAACACTTATCTGCCCACCAAGCCCACCTACCAGT...AGGGTTTGCAAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGACCAGCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTCATACACATTTTCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATTGAAGGCAGTTTGGAGCTaGGTCCCAGGGCTCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: LSYTFSKGPCFISWPLRLKAVWS*VPGLYP Trigger: TGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTT...CAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR TCA 90 bp | GTGACGGGTCTTGGGTCTCTTCTTTTAGGCTTGCAAACCCTAGAGTATAGGACGCAGCTGAGTCTCCACTaGGAGAATTGTGATGAAATC | + |
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Preference number: 2 (lower is better) Translates to: VTGLGSLLLGLQTLEYRTQLSLH*ENCDEI Trigger: GATTTCATCACAATTCTCTCAGTGGAGACTCAGCTG...CGTCCTATACTCTAGGGTTTGCAAGCCTAAAAGAAGAGACCCAAGACCCGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTCATACACATTTTCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATTGTGCTCTGTCCCTTTGTaGTTCTGGATGCAGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: LSYTFSKGPCFISWPLRLCSVPL*FWMQAY Trigger: ATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCA...CAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 72 bp | GCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCTCGGTaGAGCTCATGCAGTCTGGTGTCAGACTTGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AGRGAMLERGPR*SSCSLVSDLLR Trigger: CCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR TCA 72 bp | GCTAGTGGGGCTGAAGGCACTGGTGGCCTCATCCTGTaGAACAGGGAAGAGAGCCCGAGGCCACCGGGGATT | + |
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Preference number: 3 (lower is better) Translates to: ASGAEGTGGLIL*NREESPRPPGI Trigger: AATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTTTCACAGGATGAGGCCACCAGTGCCTTCAGCCCCACTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 72 bp | ATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTaGGCCTCGGTGCAGCTCATGCAGTCTGGTGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: IHASRPWGYAGA*ASVQLMQSGVR Trigger: TCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CCA 72 bp | GCCGTGGTGGGAAGGCAGAGTTGGGTACCTGAGACCTaGTGCTGCCCCTGGACATCTCTAGCCAGCGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: AVVGRQSWVPET*CCPWTSLASVD Trigger: ATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCACCACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR-3UTR CAA 90 bp | TGGATGCAGAAGATCCATGCTAGCAGGCCGTGGGGCTATGCTGGAGCGTGGGCCACAGCTCTTGCGCAGTaGCTCCCACAGTCTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: WMQKIHASRPWGYAGAWATALAQ*LPQSLL Trigger: GAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGT...GGCCCACGCTCCAGCATAGCCCCACGGCCTGCTAGCATGGATCTTCTGCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR GCA 72 bp | CTGGTGCTGCCCCTGGACATCTCTAGCCAGCGTGGATaGAGAAGATCCATGCTAGCAGGCCGTGGGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LVLPLDISSQRG*RRSMLAGRGAM Trigger: CATAGCCCCACGGCCTGCTAGCATGGATCTTCTGCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR GCA 72 bp | CACCACAGGGCTAGCAGCCAGGCTGGCCCTGGGAATTaGAGCCAGCCCCACATTGGAATAAGTGGCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HHRASSQAGPGN*SQPHIGISGLR Trigger: TCTGAGGCCACTTATTCCAATGTGGGGCTGGCTGCAATTCCCAGGGCCAGCCTGGCTGCTAGCCCTGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | GGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTTaGCCCTGTCTAGGACAGCCAGGAAGATCTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GKRARGHRGFAA*PCLGQPGRSLW Trigger: CCACAAAGATCTTCCTGGCTGTCCTAGACAGGGCCAAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR GCA 72 bp | GTGGGAAGGCAGAGTTGGGTACCTGAGACCTGGTGCTaGCCCTGGACATCTCTAGCCAGCGTGGATGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGRQSWVPETWC*PWTSLASVDAE Trigger: TTCTGCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR GCA 72 bp | CTTGGCAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATaGAGGCATATTCGGCCCCAGGACCAAGCCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGSLALSLCASG*RHIRPQDQAWH Trigger: GTGCCAGGCTTGGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGACCAAGCCTGGCACAACTAATGGTCAGCTGTGTTCCAGCCCACACCACAGGTTCTGCCAAGGCAGTTaGGAGCTGGGTCCCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTKPGTTNGQLCSSPHHRFCQGS*ELGPRA Trigger: AGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAA...CCTGTGGTGTGGGCTGGAACACAGCTGACCATTAGTTGTGCCAGGCTTGGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR GCA 72 bp | AACAGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTaGTTGGCCCTGTCTAGGACAGCCAGGAAGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NREESPRPPGIC*LALSRTARKIF Trigger: AAAGATCTTCCTGGCTGTCCTAGACAGGGCCAAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | GACTCTTGGACCCTAGACAGAGGCAGTGGCCTCATTTaGTACTCCCACTGCCCACCTGTCTACTCCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DSWTLDRGSGLI*YSHCPPVYSQD Trigger: GTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAGGGTCCAAGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | AGGCAGAGTTGGGTACCTGAGACCTGGTGCTGCCCCTaGACATCTCTAGCCAGCGTGGATGCAGAAGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQSWVPETWCCP*TSLASVDAEDP Trigger: TGGATCTTCTGCATCCACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTTCTGCCAAGGCAGTTaGGAGCTGGGTCCCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RWAWWADKCSKSALMSHLFCQGS*ELGPRA Trigger: AGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAA...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| 3UTR GCA 72 bp | CTAGACAGAGGCAGTGGCCTCATTTGGTACTCCCACTaGCCACCTGTCTACTCCCAGGACCTACACAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LDRGSGLIWYSH*PPVYSQDLHRS Trigger: GGATCTGTGTAGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | GCAGAGGTGGGTCTGTCTCAGCAGTGGCATTTCCACTaGTACCAAACTGTCCTGCAGCCCAGTTTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AEVGLSQQWHFH*YQTVLQPSLLP Trigger: AGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCCACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | TGCAGTCTGGTGTCAGACTTGCTGAGGGAGCAGAGGTaGGTCTGTCTCAGCAGTGGCATTTCCACTGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: CSLVSDLLREQR*VCLSSGISTGT Trigger: GGTACCAGTGGAAATGCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAGCAAGTCTGACACCAGACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGTTCTGCCAAGGCAGTTaGGAGCTGGGTCCCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PTSTQQCSHSRLTRLIKGFCQGS*ELGPRA Trigger: AGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAA...CCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| 3UTR GCA 72 bp | TGCTGCAATTCTTGGCAGCCTTGCTCTGTCCCTTTGTaGTTCTGGATGCAGGCATATTCGGCCCCAGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: CCNSWQPCSVPL*FWMQAYSAPGP Trigger: TGGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCATTCTGCCAAGGCAGTTaGGAGCTGGGTCCCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WWADKCSKSALMSHLYSAFCQGS*ELGPRA Trigger: AGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAA...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGATTTTCTCTTGGACTCTaGGACCCTAGACAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPCSVPLCFWMQAYSAPGFSLGL*DPRQRQ Trigger: CTGCCTCTGTCTAGGGTCCAAGAGTCCAAGAGAAAA...TCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR TCA 72 bp | TCTAGGACAGCCAGGAAGATCTTTGTGGGCTGCTGGTaGCGCCTCACCTCACTTCCTGTGTTTCTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRTARKIFVGCW*RLTSLPVFLRA Trigger: TGCTCTGAGAAACACAGGAAGTGAGGTGAGGCGTCACCAGCAGCCCACAAAGATCTTCCTGGCTGTCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR TCA 72 bp | ACTGGATGGATTATCGTGGCAGCCAAAAACCAGAAATaGACCCCAAACCCACCCAAGCCAGGTCTGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGWIIVAAKNQK*TPNPPKPGLPA Trigger: AGCAGGCAGACCTGGCTTGGGTGGGTTTGGGGTTCATTTCTGGTTTTTGGCTGCCACGATAATCCATCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | AAGGAGACACCCCAAGACACTGGTAGGTGGGCTTGGTaGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KETPQDTGRWAW*ADKCSKSALMS Trigger: GGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCTACCAGTGTCTTGGGGTGTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | CCTAAGGAGACACCCCAAGACACTGGTAGGTGGGCTTaGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PKETPQDTGRWA*WADKCSKSALM Trigger: CATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCTACCAGTGTCTTGGGGTGTCTCCTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | TTTTCTCTTGGACTCTTGGACCCTAGACAGAGGCAGTaGCCTCATTTGGTACTCCCACTGCCCACCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSLGLLDPRQRQ*PHLVLPLPTCL Trigger: TAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAGGGTCCAAGAGTCCAAGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | GTAGCTGGGATCACCTTAGCCTTCTGCTGCAATTCTTaGCAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VAGITLAFCCNS*QPCSVPLCFWM Trigger: CATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCCAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | CCCATCCTGCAGGTTCAGCTGGTCTGTGACGGGTCTTaGGTCTCTTCTTTTAGGCTTGCAAACCCTAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PILQVQLVCDGS*VSSFRLANPRV Trigger: TACTCTAGGGTTTGCAAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGACCAGCTGAACCTGCAGGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR TCA 72 bp | GGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTaGTGTCCCACCTCTACTCAGCAGTGTTCACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLGGQISVQNQP*CPTSTQQCSHS Trigger: AGAGTGTGAACACTGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTCAGCAGTGGCATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGTTTGGAGAATGTTTTTCTCTaGGACTCTTGGACCCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSQQWHFHWYQTVLQPSLENVFL*DSWTLD Trigger: GTCTAGGGTCCAAGAGTCCAAGAGAAAAACATTCTC...CAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR GCA 72 bp | ATCACCTTAGCCTTCTGCTGCAATTCTTGGCAGCCTTaGTCTGTCCCTTTGTGCTTCTGGATGCAGGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: ITLAFCCNSWQP*SVPLCFWMQAY Trigger: ATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR TCA 72 bp | CTAAGGTGTTTCCATCTCACACACCCTACCTGCTTGTaGGTACTGGGACTGAAGAGCCACCTTAGGTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LRCFHLTHPTCL*VLGLKSHLRFL Trigger: TAAGAACCTAAGGTGGCTCTTCAGTCCCAGTACTCACAAGCAGGTAGGGTGTGTGAGATGGAAACACCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR TCA 72 bp | TTAGGCTTGCAAACCCTAGAGTATAGGACGTCCATCTaGGTAGCTGGGATCACCTTAGCCTTCTGCTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGLQTLEYRTSI*VAGITLAFCCN Trigger: ATTGCAGCAGAAGGCTAAGGTGATCCCAGCTACTCAGATGGACGTCCTATACTCTAGGGTTTGCAAGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | GAGGTGAACAAAGCAGGTGAACTGGATGGATTATCGTaGCAGCCAAAAACCAGAAATGAACCCCAAACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EVNKAGELDGLS*QPKTRNEPQTH Trigger: GTGGGTTTGGGGTTCATTTCTGGTTTTTGGCTGCCACGATAATCCATCCAGTTCACCTGCTTTGTTCACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CCA 72 bp | TGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATaGCTAATGCTATCACTAGGCAATTACCACAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CSHSLCSPHTSS*LMLSLGNYHKD Trigger: GTCTTTGTGGTAATTGCCTAGTGATAGCATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCTGTCTCAGCAGTGGCATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGCCGTCTCCGAGTCATTaGAGGGGGCGCCGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAVAFPLVPNCPAAQPSPSH*RGRRAL Trigger: AAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGG...CTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCTGGTGACGCCTCACCTCACTTCCTGTGTTTCTCAGAGCACCTCCCAGACCCGGCCTTCTGCATaGCGGCCCAAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLVTPHLTSCVSQSTSQTRPSA*RPKPLP Trigger: TGGCAAGGGTTTGGGCCGGCATGCAGAAGGCCGGGT...CTGGGAGGTGCTCTGAGAAACACAGGAAGTGAGGTGAGGCGTCACCAGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCGTCTCCGAGTCATTaGAGGGGGCGCCGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRHQGDSCLSAKAVWSWVPSPSH*RGRRAL Trigger: AAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGG...GACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACCGGCAACACTACAGCATaGATGGGCTCCACCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPFVLLDAGIFGPRTGNTTA*MGSTRP Trigger: AGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCC...GGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR CCA 90 bp | CCTCATCCTGTGAAACAGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTTATCCACCCCAGCATCTaGGGTCCCAGGAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPVKQGREPEATGDLLLIHPSI*GPRNLA Trigger: AGCCAGGTTCCTGGGACCCCAGATGCTGGGGTGGAT...AAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTTTCACAGGATGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CAA 72 bp | AGAGCACCTCCCAGCAGCCACACAGCTCTTGCGCAGTaGCTCCCACAGTCTCTGCTCTCCTCACACCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RAPPSSHTALAQ*LPQSLLSSHLI Trigger: GATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CAA 72 bp | AGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTaGGCCCTGTCTAGGACAGCCAGGAAGATCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REESPRPPGICC*ALSRTARKIFV Trigger: CACAAAGATCTTCCTGGCTGTCCTAGACAGGGCCAAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR TCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGGCAGCTTGCTCTTTCTaGCCGACAACAGGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGAACSF*PTTGWP Trigger: AGGCCAGCCTGTTGTCGGTCAGAAAGAGCAAGCTGC...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGACCGTCTCCGAGTCATTaGAGGGGGCGCCGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCCLGIRVTAVFLPRQFGPSPSH*RGRRAL Trigger: AAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGG...TCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTGTTTAGGCATCAGGGTCTCCTCCTCCTCCAGTaGAGAGGAGGTGGATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GILRRGWFLFQVLFRHQGLLLLQ*RGGGSR Trigger: CCGGGATCCACCTCCTCTGCACTGGAGGAGGAGGAG...ACCCTGATGCCTAAACAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATGTGATCCGTGCTGGGTaGCACAGGCCATCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNVIRAG*HRPSWC Trigger: GCACCAGGATGGCCTGTGGCACCCAGCACGGATCAC...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTGTTTAGGCATCAGGGTACCCGGCCTTCTGCATaGCGGCCCAAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GILRRGWFLFQVLFRHQGTRPSA*RPKPLP Trigger: TGGCAAGGGTTTGGGCCGGCATGCAGAAGGCCGGGT...ACCCTGATGCCTAAACAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGGACCCGGCCTTCTGCATaGCGGCCCAAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAKAVWSWVPGLYPQYRTRPSA*RPKPLP Trigger: TGGCAAGGGTTTGGGCCGGCATGCAGAAGGCCGGGT...CCTGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTACTCCCACTGCCCACCTGTCTACTCCCAGGACCTACACAGATCCCTGTGTGCAGGCTCAAAGCCTaGTTGGCGCTCTTGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVLPLPTCLLPGPTQIPVCRLKA*LALLLA Trigger: CGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCA...CACAGGGATCTGTGTAGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | GGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATTGCAGGCTCAAAGCCTaGTTGGCGCTCTTGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GDSCLSAKAVWSWVPGLYCRLKA*LALLLA Trigger: CGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCA...ATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACCATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPFVLLDAGIFGPRTILEAC*TQPGLA Trigger: AGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAAT...GGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR CCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGGGCTCAAAGCCTGCTTaGCGCTCTTGCTGGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGGSKPA*RSCWRD Trigger: ATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCC...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCCTCCTCCTCCTCCAGTaGAGAGGAGGTGGATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWAWWADKCSKSALMSHLLLLLQ*RGGGSR Trigger: CCGGGATCCACCTCCTCTGCACTGGAGGAGGAGGAG...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCACTTCCTGTGTTTCTCAGAGCACCTCCCAGCAGCCACACAGCTCTTGCGCAGCACAGGCCATCCTGGTaGTTGGCCAGACATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVFLRAPPSSHTALAQHRPSW*LARHAE Trigger: CTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTG...CTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCTGAGAAACACAGGAAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCGTGATCCGTGCTGGGTaGCACAGGCCATCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWAWWADKCSKSALMSHLVIRAG*HRPSWC Trigger: GCACCAGGATGGCCTGTGGCACCCAGCACGGATCAC...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACACATCAGTGATCCGTaGTGGGTGCCACAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPCSVPLCFWMQAYSAPGHISDP*WVPQAI Trigger: GATGGCCTGTGGCACCCAGCACGGATCACTGATGTG...TCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGGCCGGCCCAAACCCTTaGCAAACTCATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGAGPNP*QTHSPS Trigger: AGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGC...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | GCCTTGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGACCGCCGGCCCAAACCCTTaGCAAACTCATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPFVLLDAGIFGPRTAGPNP*QTHSPS Trigger: AGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGC...GGTCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACACTCCACCCGGCCTTCTaGATGCCGGCCCAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLPRQFGAGSQGSIHNTLHPAF*MPAQTL Trigger: AAGGGTTTGGGCCGGCATGCAGAAGGCCGGGTGGAG...TGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GGGTCTGTCTCAGCAGTGGCATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGATCAGTGATCCGTGCTaGGTGCCACAGGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAVAFPLVPNCPAAQISDPC*VPQAIL Trigger: CAGGATGGCCTGTGGCACCCAGCACGGATCACTGAT...CTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATGGCAACACTACAGCATaGATGGGCTCCACCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNGNTTA*MGSTRP Trigger: AGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCC...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSCLSAKAVWSWVPGLYILEAC*TQPGLA Trigger: AGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAAT...ATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GGCCCTGGGAATTGCAGCCAGCCCCACATTGGAATAAGTGGCCTCAGAGCTAGTGGCTCAAAGCCTGCTTaGCGCTCTTGCTGGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPGNCSQPHIGISGLRASGSKPA*RSCWRD Trigger: ATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCC...ACTAGCTCTGAGGCCACTTATTCCAATGTGGGGCTGGCTGCAATTCCCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 72 bp | GGACTCTTGGACCCTAGACAGAGGCAGTGGCCTCATTaGGTACTCCCACTGCCCACCTGTCTACTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLDPRQRQWPH*VLPLPTCLLPG Trigger: TCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCTCTGTCTAGGGTCCAAGAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| 3UTR CAA 72 bp | TGTTTCTCAGAGCACCTCCCAGCAGCCACACAGCTCTaGCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFSEHLPAATQL*RSCSHSLCSPH Trigger: GTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAGAGCTGTGTGGCTGCTGGGAGGTGCTCTGAGAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | AGGACCAAGCCTGGCACAACTAATGGTCAGCTGTGTTCCAGCCCACACCACAGGACAGGCTGGCCTCGGTaGGCTCAATCAGCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTKPGTTNGQLCSSPHHRTGWPR*AQSAPL Trigger: TAAAGGAGCTGATTGAGCTCACCGAGGCCAGCCTGT...CCTGTGGTGTGGGCTGGAACACAGCTGACCATTAGTTGTGCCAGGCTTGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | GGGTCTGTCTCAGCAGTGGCATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGACCTGCAGTTCTCCTTaGACCGGCACTTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAVAFPLVPNCPAAQTCSSP*TGTFPP Trigger: TGGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGT...CTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTGAGACAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR TCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGTCTGTCATCTTCCTGTaGGTGTCTGCCTTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGSVIFL*VSAFRC Trigger: ACAGCGGAAGGCAGACACTCACAGGAAGATGACAGA...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATTGTGATACTCCAGCGTaGCCCAAGCGCTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSCLSAKAVWSWVPGLYCDTPA*PKRCSR Trigger: CCTACTACAGCGCTTGGGGCACGCTGGAGTATCACA...ATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGGCACAGGCCATCCTGGTaGTTGGCCAGACATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAKAVWSWVPGLYPQYRHRPSW*LARHAE Trigger: CTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTG...CCTGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATCACAGGCCATCCTGGTaGTTGGCCAGACATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNHRPSW*LARHAE Trigger: CTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTG...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATCACATCAGTGATCCGTaGTGGGTGCCACAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNHISDP*WVPQAI Trigger: GATGGCCTGTGGCACCCAGCACGGATCACTGATGTG...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGGCAGAGGAGGCAGGATaGTGTCCCCCTCCACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRCCLGIRVTAVFLPRQAEEAG*CPPPLQ Trigger: CTGTAGTGGAGGGGGACAGCATCCTGCCTCCTCTGC...CTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGGCAGAGGAGGCAGGATaGTGTCCCCCTCCACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFCQGSLELGPRALSTIQAEEAG*CPPPLQ Trigger: CTGTAGTGGAGGGGGACAGCATCCTGCCTCCTCTGC...CTGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTACCCGGCCTTCTGCATaGCGGCCCAAACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRCCLGIRVTAVFLPRQFTRPSA*RPKPLP Trigger: TGGCAAGGGTTTGGGCCGGCATGCAGAAGGCCGGGT...AAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | GTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGCAGGCTCAAAGCCTaGTTGGCGCTCTTGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFRHQGDSCLSAKAVWSCRLKA*LALLLA Trigger: CGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCA...GCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGGTGCCACAGGCCATCCTaGTGCTTGGCCAGACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAKAVWSWVPGLYPQYRCHRPS*CLARHA Trigger: TGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCA...CCTGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | CTCTTCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGGCAACACTACAGCATaGATGGGCTCCACCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFQVLFRHQGDSCLSAKAGNTTA*MGSTRP Trigger: AGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCC...TGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGGCTGGCCTCGGTaGGCTCAATCAGCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNTGWPR*AQSAPL Trigger: TAAAGGAGCTGATTGAGCTCACCGAGGCCAGCCTGT...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | GTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCGCAGCTTGCTCTTTCTaGCCGACAACAGGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFRHQGDSCLSAKAVWSAACSF*PTTGWP Trigger: AGGCCAGCCTGTTGTCGGTCAGAAAGAGCAAGCTGC...GCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TTGGTACTCCCACTGCCCACCTGTCTACTCCCAGGACCTACACAGATCCCTGTGTGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLPLPTCLLPGPTQIPVCTLVQ*FPSRQH Trigger: GTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCA...CACAGGGATCTGTGTAGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATGGCTAATGCTTCCACAGATACCACCTaGCCATGGGAGAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPQSLLSSHLIMANASTDTT*PWENLQ Trigger: CTGCAGGTTCTCCCATGGGCAGGTGGTATCTGTGGA...AGCATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATGCCGGCCCAAACCCTTaGCAAACTCATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNAGPNP*QTHSPS Trigger: AGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGC...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCACTCCACCCGGCCTTCTaGATGCCGGCCCAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWWADKCSKSALMSHLYSLHPAF*MPAQTL Trigger: AAGGGTTTGGGCCGGCATGCAGAAGGCCGGGTGGAG...TGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | TGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGCTCCACCCGGCCTTCTaGATGCCGGCCCAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSHSRLTRLIKGHPKKGLLHPAF*MPAQTL Trigger: AAGGGTTTGGGCCGGCATGCAGAAGGCCGGGTGGAG...CAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | ACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTTGCAGGCTCAAAGCCTaGTTGGCGCTCTTGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TRLIKGHPKKGLVPLPGACRLKA*LALLLA Trigger: CGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCA...AGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | TTGGTACTCCCACTGCCCACCTGTCTACTCCCAGGACCTACACAGATCCCTGTGCTTCCTGTGAGTGTCTaGCTTCCGCTGTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLPLPTCLLPGPTQIPVLPVSV*LPLFPL Trigger: CAGAGGAAACAGCGGAAGGCAGACACTCACAGGAAG...CACAGGGATCTGTGTAGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTGCCACAGGCCATCCTaGTGCTTGGCCAGACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWAWWADKCSKSALMSHLCHRPS*CLARHA Trigger: TGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCA...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCATCAGTGATCCGTGCTaGGTGCCACAGGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWAWWADKCSKSALMSHLISDPC*VPQAIL Trigger: CAGGATGGCCTGTGGCACCCAGCACGGATCACTGAT...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | CCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGGGCAACACTACAGCATaGATGGGCTCCACCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSTQQCSHSRLTRLIKGGNTTA*MGSTRP Trigger: AGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCC...CCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLFRHQGDSCLSAKAVWILEAC*TQPGLA Trigger: AGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAAT...CCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTGTTTAGGCATATCCACCCCAGCATCTaGGGTCCCAGGAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGILRRGWFLFQVLFRHIHPSI*GPRNLA Trigger: AGCCAGGTTCCTGGGACCCCAGATGCTGGGGTGGAT...ATGCCTAAACAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTATCCACCCCAGCATCTaGGGTCCCAGGAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIRVTAVFLPRQFGAIHPSI*GPRNLA Trigger: AGCCAGGTTCCTGGGACCCCAGATGCTGGGGTGGAT...AGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGTGGCCTCATTTGGTACTCCCACTGCCCACCTGTCTACTCCCAGGACCTTTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RQWPHLVLPLPTCLLPGPFVPSL*GIHPSI Trigger: GATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAA...AGGTCCTGGGAGTAGACAGGTGGGCAGTGGGAGTACCAAATGAGGCCACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | TGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGGGCTCAAAGCCTGCTTaGCGCTCTTGCTGGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLGIRVTAVFLPRQFGAGGSKPA*RSCWRD Trigger: ATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCC...CCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | TTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCATTGTCCACATCAGTaGTCCGTGCTGGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FRHQGDSCLSAKAVWSWVHCPHQ*SVLGAT Trigger: TGTGGCACCCAGCACGGATCACTGATGTGGACAATG...GACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTGTGATACTCCAGCGTaGCCCAAGCGCTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRCCLGIRVTAVFLPRQCDTPA*PKRCSR Trigger: CCTACTACAGCGCTTGGGGCACGCTGGAGTATCACA...CTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACAGTCCACAGATACCACCTaGCCATGGGAGAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFCQGSLELGPRALSTIQSTDTT*PWENLQ Trigger: CTGCAGGTTCTCCCATGGGCAGGTGGTATCTGTGGA...CTGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | ACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATGTGATCCGTGCTGGGTaGCACAGGCCATCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQCSHSRLTRLIKGHVIRAG*HRPSWC Trigger: GCACCAGGATGGCCTGTGGCACCCAGCACGGATCAC...ATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CACTCTAGGCTGACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCACATCAGTGATCCGTaGTGGGTGCCACAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HSRLTRLIKGHPKKGLVPHISDP*WVPQAI Trigger: GATGGCCTGTGGCACCCAGCACGGATCACTGATGTG...AGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCAGAGGAGGCAGGATaGTGTCCCCCTCCACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: AWWADKCSKSALMSHLYSAEEAG*CPPPLQ Trigger: CTGTAGTGGAGGGGGACAGCATCCTGCCTCCTCTGC...TGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCGCTTTGTCTTCTTCTaGAGTATCTCTGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGRFVFF*SISAHW Trigger: CCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCG...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATCTTCCTGTGAGTGTCTaGCTTCCGCTGTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNLPVSV*LPLFPL Trigger: CAGAGGAAACAGCGGAAGGCAGACACTCACAGGAAG...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATTCCGCAATGGCCTTCTaGAAAGCCAGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNSAMAF*KARYSA Trigger: TGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGA...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | AGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCGATACCACCTGCCCATaGGAGAACCTGCAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWAWWADKCSKSALMSHLDTTCP*ENLQFS Trigger: GGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTATC...GAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACGGCTCAAAGCCTGCTTaGCGCTCTTGCTGGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WAWWADKCSKSALMSHLYGSKPA*RSCWRD Trigger: ATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCC...GTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| 3UTR CAA 72 bp | TTCTGCTGCAATTCTTGGCAGCCTTGCTCTGTCCCTTaGTGCTTCTGGATGCAGGCATATTCGGCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCCNSWQPCSVP*CFWMQAYSAPG Trigger: TCCTGGGGCCGAATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACACAGGCTGGCCTCGGTaGGCTCAATCAGCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WAWWADKCSKSALMSHLYTGWPR*AQSAPL Trigger: TAAAGGAGCTGATTGAGCTCACCGAGGCCAGCCTGT...GTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | CTTGCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATGGCTAATCTTAAGTCTGGATCCTaGAAGGGACGCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAQLLPQSLLSSHLIMANLKSGS*KGRSSS Trigger: GGATGAGCTGCGTCCCTTTCAGGATCCAGACTTAAG...ATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TCTTCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRCCLGIRVTAVFLPRQCTLVQ*FPSRQH Trigger: GTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCA...CTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCATCTGTCATCTTCCTGTaGGTGTCTGCCTTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQVLFRHQGDSCLSAKASVIFL*VSAFRC Trigger: ACAGCGGAAGGCAGACACTCACAGGAAGATGACAGA...TGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGTGTGATACTCCAGCGTaGCCCAAGCGCTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSTQQCSHSRLTRLIKGCDTPA*PKRCSR Trigger: CCTACTACAGCGCTTGGGGCACGCTGGAGTATCACA...CCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | TTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTGTTTAGGCATGCCGGCCCAAACCCTTaGCAAACTCATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGILRRGWFLFQVLFRHAGPNP*QTHSPS Trigger: AGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGC...ATGCCTAAACAGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | CTTTCATACACATTTTCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATTGCTCCACCCGGCCTTCTaGATGCCGGCCCAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSYTFSKGPCFISWPLRLLHPAF*MPAQTL Trigger: AAGGGTTTGGGCCGGCATGCAGAAGGCCGGGTGGAG...CAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCCTTCCTGTGAGTGTCTaGCTTCCGCTGTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLFRHQGDSCLSAKAVWSLPVSV*LPLFPL Trigger: CAGAGGAAACAGCGGAAGGCAGACACTCACAGGAAG...GCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATACATCCGCAATGGCCTTCTaGAAAGCCAGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLPRQFGAGSQGSIHNTSAMAF*KARYSA Trigger: TGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGA...TGTATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGATACCACCTGCCCATaGGAGAACCTGCAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRCCLGIRVTAVFLPRQFDTTCP*ENLQFS Trigger: GGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTATC...AAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCATGCCACAGGCCATCCTaGTGCTTGGCCAGACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WWADKCSKSALMSHLYSACHRPS*CLARHA Trigger: TGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCA...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCAATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WWADKCSKSALMSHLYSAILEAC*TQPGLA Trigger: AGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAAT...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCLSAKAVWSWVPGLYPQFVPSL*GIHPSI Trigger: GATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAA...TTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | TGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGACCTGCAGTTCTCCTTaGACCGGCACTTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSHSRLTRLIKGHPKKGLTCSSP*TGTFPP Trigger: TGGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGT...CAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTACCTGCAGTTCTCCTTaGACCGGCACTTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSRLTRLIKGHPKKGLVTCSSP*TGTFPP Trigger: TGGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGT...AACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACCTTAAGTCTGGATCCTaGAAGGGACGCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WAWWADKCSKSALMSHLYLKSGS*KGRSSS Trigger: GGATGAGCTGCGTCCCTTTCAGGATCCAGACTTAAG...GTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR TCA 90 bp | TGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLGIRVTAVFLPRQFGAGTHSPS*RGVWSQ Trigger: TTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGT...CCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFRHQGDSCLSAKAVWSTHSPS*RGVWSQ Trigger: TTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGT...GCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | CAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLFRHQGDSCLSAKAVWTHSPS*RGVWSQ Trigger: TTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGT...CCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR TCA 90 bp | ACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTTGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TRLIKGHPKKGLVPLPGACTLVQ*FPSRQH Trigger: GTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCA...AGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCATCCACAGATACCACCTaGCCATGGGAGAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWADKCSKSALMSHLYSASTDTT*PWENLQ Trigger: CTGCAGGTTCTCCCATGGGCAGGTGGTATCTGTGGA...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGTTGGGTACCTGAGACCTGGTGCTGCCCCTGGACATCTCTAGCCAGCCCAGGAACCTGGCTTTaGAGTTTTTCATTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSWVPETWCCPWTSLASPGTWL*SFSFKK Trigger: CTTTTTGAATGAAAAACTGCAAAGCCAGGTTCCTGG...GCTGGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTCTTCCTGTGAGTGTCTaGCTTCCGCTGTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIRVTAVFLPRQFGALPVSV*LPLFPL Trigger: CAGAGGAAACAGCGGAAGGCAGACACTCACAGGAAG...AGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATATCTTCTCCTCAGTCTaGAAGAGCTGCAGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNIFSSV*KSCRLK Trigger: TTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGAT...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | GCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATGGCTAATGCTATCTTCTCCTCAGTCTaGAAGAGCTGCAGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPQSLLSSHLIMANAIFSSV*KSCRLK Trigger: TTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGAT...AGCATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCACTTAAGTCTGGATCCTaGAAGGGACGCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AWWADKCSKSALMSHLYSLKSGS*KGRSSS Trigger: GGATGAGCTGCGTCCCTTTCAGGATCCAGACTTAAG...TGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATCATTGTCCACATCAGTaGTCCGTGCTGGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQCSHSRLTRLIKGHHCPHQ*SVLGAT Trigger: TGTGGCACCCAGCACGGATCACTGATGTGGACAATG...ATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WAWWADKCSKSALMSHLYTHSPS*RGVWSQ Trigger: TTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGT...GTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCATGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: WWADKCSKSALMSHLYSACTLVQ*FPSRQH Trigger: GTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCA...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCAGCATCTGTCATCTTCCTGTaGGTGTCTGCCTTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WWADKCSKSALMSHLYSASVIFL*VSAFRC Trigger: ACAGCGGAAGGCAGACACTCACAGGAAGATGACAGA...TGCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR GCA 90 bp | CATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCCAGGAACCTGGCTTTaGAGTTTTTCATTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQGDSCLSAKAVWSWVPGPGTWL*SFSFKK Trigger: CTTTTTGAATGAAAAACTGCAAAGCCAGGTTCCTGG...CCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | CACTCTAGGCTGACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTTTGGTTCCACCACTCTaGCATAGCTGGAGTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSRLTRLIKGHPKKGLVPLVPPL*HSWSHL Trigger: CAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAA...AGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTTTGGTTCCACCACTCTaGCATAGCTGGAGTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIRVTAVFLPRQFGALVPPL*HSWSHL Trigger: CAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAA...AGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTTTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIRVTAVFLPRQFGAFVPSL*GIHPSI Trigger: GATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAA...AGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCATCTTCTCCTCAGTCTaGAAGAGCTGCAGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRHQGDSCLSAKAVWSWVIFSSV*KSCRLK Trigger: TTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGAT...GACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGATCTTCTCCTCAGTCTaGAAGAGCTGCAGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLFRHQGDSCLSAKAVWIFSSV*KSCRLK Trigger: TTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGAT...CCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| 3UTR CAA 72 bp | GATCACCTTAGCCTTCTGCTGCAATTCTTGGCAGCCTaGCTCTGTCCCTTTGTGCTTCTGGATGCAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DHLSLLLQFLAA*LCPFVLLDAGI Trigger: TATGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| 3UTR CAA 72 bp | AGTAGCTGGGATCACCTTAGCCTTCTGCTGCAATTCTaGGCAGCCTTGCTCTGTCCCTTTGTGCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSWDHLSLLLQF*AALLCPFVLLD Trigger: ATCCAGAAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCCAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTCGCTTTGTCTTCTTCTaGAGTATCTCTGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIRVTAVFLPRQFGARFVFF*SISAHW Trigger: CCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCG...AGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTAATTAAGGGGCATCCTAAGAAGGGGCTGGTTCCTCTTCCAGGTGCTCGCTTTGTCTTCTTCTaGAGTATCTCTGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLIKGHPKKGLVPLPGARFVFF*SISAHW Trigger: CCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCG...AGCACCTGGAAGAGGAACCAGCCCCTTCTTAGGATGCCCCTTAATTAGCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCAGGAACCTGGCTTTaGAGTTTTTCATTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDSCLSAKAVWSWVPGLYPGTWL*SFSFKK Trigger: CTTTTTGAATGAAAAACTGCAAAGCCAGGTTCCTGG...ATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CCA 90 bp | CTTTCATACACATTTTCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATTGTCCGCAATGGCCTTCTaGAAAGCCAGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYTFSKGPCFISWPLRLSAMAF*KARYSA Trigger: TGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGA...CAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR CCA 90 bp | ACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATTTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQCSHSRLTRLIKGHFVPSL*GIHPSI Trigger: GATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAA...ATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR GCA 90 bp | GACACTGGTAGGTGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGCCAGGAACCTGGCTTTaGAGTTTTTCATTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTGRWAWWADKCSKSALMPGTWL*SFSFKK Trigger: CTTTTTGAATGAAAAACTGCAAAGCCAGGTTCCTGG...CATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCACCTACCAGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 90 bp | GGGTCCTCCTCCTCCTCCTCCAGTGCAGAGGAGGTGGATCCCGGCTaGACCTCGCTCCCAGGGGCCGTCTCCGAGTCATTGCAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSSSSSAEEVDPG*TSLPGAVSESLQGA Trigger: CGCCCCCTGCAATGACTCGGAGACGGCCCCTGGGAGCGAGGTGCAGCCGGGATCCACCTCCTCTGCACTGGAGGAGGAGGAGGAGGACCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 90 bp | TGGATCCCGGCTGCACCTCGCTCCCAGGGGCCGTCTCCGAGTCATTaGAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCAATGGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WIPAAPRSQGPSPSH*RGRRALPLPPQWPS Trigger: AGAAGGCCATTGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGGCCCCTGGGAGCGAGGTGCAGCCGGGATCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | GGCTCCCTCCAGCTTCTCCGGCCAGTGTTCCGGGTTAGGGCCTCCTaGATGCCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLQLLRPVFRVRAS*MPRMSRWVRSIFSS Trigger: TGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGAGAAGCTGGAGGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156258.2 |
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| CDS TCA 90 bp | CTGGCCTCGGTGAGCTCAATCAGCTCCTTTAGATCGCCCTGCAGCTaGCGCAGGTCCGCCTGCTCAGAAGCGTCTAGGCCAGCACCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LASVSSISSFRSPCS*RRSACSEASRPAPS Trigger: GCTCGGTGCTGGCCTAGACGCTTCTGAGCAGGCGGACCTGCGTCAGCTGCAGGGCGATCTAAAGGAGCTGATTGAGCTCACCGAGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 90 bp | CCCTCCAGCTTCTCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSFSGQCSGLGPPG*PGCPVGSAQSSPQS Trigger: AGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGAGAAGCTGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156258.2 |
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| CDS CCA 90 bp | CCGAGTCATTGCAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCAATaGCCTTCTGGAAAGCCAGGTACTCAGCATCCTCTTGAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSHCRGRRALPLPPQ*PSGKPGTQHPLELG Trigger: GCCCAGCTCAAGAGGATGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCAATGACTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CCAGTGTTCCGGGTTAGGGCCTCCTGGATGCCCCGGATGTCCCGTTaGGTCCGCTCAATCTTCTCCTCAGTCTGGAAGAGCTGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVFRVRASWMPRMSR*VRSIFSSVWKSCRL Trigger: GAGCCTGCAGCTCTTCCAGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 90 bp | ATGCCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCAGTCTaGAAGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MPRMSRWVRSIFSSV*KSCRLKACLALLLA Trigger: CGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 90 bp | GCTGTCGTCATATTGTGCCGGCCAGTGTTCCGGGTTAGGGCCTCCTaGATGCCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVVILCRPVFRVRAS*MPRMSRWVRSIFSS Trigger: TGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGCACAATATGACGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CAA 90 bp | CCTCATCCTGTGAAACAGGGAAGAGAGCCCGAGGCCACCGGGGATTTGCTGCTTCATTTTGGAGGCCTGTaGGACCCAGCCTGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPVKQGREPEATGDLLLHFGGL*DPAWPR Trigger: GCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATG...AAGCAGCAAATCCCCGGTGGCCTCGGGCTCTCTTCCCTGTTTCACAGGATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS GCA 90 bp | AGCCAATGCCCCGTGTGTGTACCTCCCAGCCAGCAAAGGCAGAACTaGAGGTCCCAGTGTCCACCGTGCTTGGTTCCACCACTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQCPVCVPPSQQRQN*RSQCPPCLVPPLWH Trigger: ATGCCAGAGTGGTGGAACCAAGCACGGTGGACACTGGGACCTGCAGTTCTGCCTTTGCTGGCTGGGAGGTACACACACGGGGCATTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 90 bp | TCGTCATATTGTGCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSYCAGQCSGLGPPG*PGCPVGSAQSSPQS Trigger: AGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGCACAATATGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | TCTGCACACTGGTCCAGTGATTTCCCTCTAGGCAACACTACAGCATaGATGGGCTCCACCCGGCCTTCTGCATGCCGGCCCAAACCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAHWSSDFPLGNTTA*MGSTRPSACRPKPL Trigger: CAAGGGTTTGGGCCGGCATGCAGAAGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 90 bp | CTTCTGCATGCCGGCCCAAACCCTTGCCAAACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAATGCCCCGTGTGTGTACCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHAGPNPCQTHSPS*RGVWSQCPVCVPPS Trigger: GCTGGGAGGTACACACACGGGGCATTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGCATGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CCAGCCAGCAAAGGCAGAACTGCAGGTCCCAGTGTCCACCGTGCTTaGTTCCACCACTCTGGCATAGCTGGAGTCACTTGCATCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PASKGRTAGPSVHRA*FHHSGIAGVTCITS Trigger: ACTGGTGATGCAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAAGCACGGTGGACACTGGGACCTGCAGTTCTGCCTTTGCTGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | GGCCCTCAGGTCTACTACCACTCCTCCGGCATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCTTTGTCTTCTTCTGCAGTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPQVYYHSSGILEAC*TQPGLALSSSAVSL Trigger: CAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAGACCTGAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 90 bp | CCATTGTCCACATCAGTGATCCGTGCTGGGTGCCACAGGCCATCCTaGTGCTTGGCCAGACATGCAGAGCCAGTCTGCAGTAAGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSTSVIRAGCHRPS*CLARHAEPVCSKLK Trigger: CTTAAGCTTACTGCAGACTGGCTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCACCCAGCACGGATCACTGATGTGGACAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CTACTACCACTCCTCCGGCATTTTGGAGGCCTGTTGGACCCAGCCTaGCCTCGCTTTGTCTTCTTCTGCAGTATCTCTGCACACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPLLRHFGGLLDPA*PRFVFFCSISAHWS Trigger: GGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 90 bp | CTTGGCGCTCTTGCTGGCGTGATACATGTCTTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATCTGGGGTCCCAGGAACCTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGALAGVIHVFVPSL*GIHPSIWGPRNLAL Trigger: CAAAGCCAGGTTCCTGGGACCCCAGATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CAA 90 bp | TTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCAGGCCATCCTGGTGCTaGGCCAGACATGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRHQGDSCLSAKAVWSWVRPSWC*ARHAEP Trigger: TGGCTCTGCATGTCTGGCCAAGCACCAGGATGGCCT...GACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTCATTTTGGAGGCCTGTaGGACCCAGCCTGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRCCLGIRVTAVFLPRQFHFGGL*DPAWPR Trigger: GCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATG...AAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 90 bp | TCCTCCGCAATGGCCTTCTGGAAAGCCAGGTACTCAGCATCCTCTTaGGCTGGGCTCTCCTGGTCCACTGTAGACAGCAGCTTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSAMAFWKARYSASS*AGLSWSTVDSSLLF Trigger: AAAGAGCAAGCTGCTGTCTACAGTGGACCAGGAGAGCCCAGCTCAAGAGGATGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS TCA 90 bp | GCCAGACATGCAGAGCCAGTCTGCAGTAAGCTTAAGTCTGGATCCTaGAAGGGACGCAGCTCATCCACAGATACCACCTGCCCATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARHAEPVCSKLKSGS*KGRSSSTDTTCPWE Trigger: CTCCCATGGGCAGGTGGTATCTGTGGATGAGCTGCGTCCCTTTCAGGATCCAGACTTAAGCTTACTGCAGACTGGCTCTGCATGTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS TCA 90 bp | TGGAAGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTGCTGGCGTaGTACATGTCTTTGTTCCTTCTCTCTGGGGTATCCACCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WKSCRLKACLALLLA*YMSLFLLSGVSTPA Trigger: TGCTGGGGTGGATACCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 90 bp | TTGTCCACATCAGTGATCCGTGCTGGGTGCCACAGGCCATCCTGGTaGTTGGCCAGACATGCAGAGCCAGTCTGCAGTAAGCTTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTSVIRAGCHRPSW*LARHAEPVCSKLKS Trigger: AGACTTAAGCTTACTGCAGACTGGCTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCACCCAGCACGGATCACTGATGTGGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CGCAATGGCCTTCTGGAAAGCCAGGTACTCAGCATCCTCTTGAGCTaGGCTCTCCTGGTCCACTGTAGACAGCAGCTTGCTCTTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNGLLESQVLSILLS*ALLVHCRQQLALSD Trigger: GTCAGAAAGAGCAAGCTGCTGTCTACAGTGGACCAGGAGAGCCCAGCTCAAGAGGATGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CAGAACTGCAGGTCCCAGTGTCCACCGTGCTTGGTTCCACCACTCTaGCATAGCTGGAGTCACTTGCATCACCAGTGTCTGAGTCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QNCRSQCPPCLVPPL*HSWSHLHHQCLSQM Trigger: CATCTGACTCAGACACTGGTGATGCAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAAGCACGGTGGACACTGGGACCTGCAGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CAGTCTGGAAGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTGCTaGCGTGATACATGTCTTTGTTCCTTCTCTCTGGGGTATCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: QSGRAAGSKPAWRSC*RDTCLCSFSLGYPP Trigger: GGGTGGATACCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCCAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CAA 90 bp | GCGCAGTTGCTCCCACAGTCTCTGCTCTCCTCACACCTCATCATGGCTAATGCTAACCTGCAGTTCTCCTaGAACCGGCACTTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLLPQSLLSSHLIMANANLQFS*NRHFPS Trigger: GGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGTT...AGCATTAGCCATGATGAGGTGTGAGGAGAGCAGAGACTGTGGGAGCAACTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS-3UTR CAA 90 bp | TGGGCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACAGGCCATCCTGGTGCTaGGCCAGACATGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WAWWADKCSKSALMSHLYRPSWC*ARHAEP Trigger: TGGCTCTGCATGTCTGGCCAAGCACCAGGATGGCCT...GTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CAA 90 bp | GCTTGGTGGGCAGATAAGTGTTCAAAATCAGCCCTGATGTCCCACCTCTACTCACATTTTGGAGGCCTGTaGGACCCAGCCTGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AWWADKCSKSALMSHLYSHFGGL*DPAWPR Trigger: GCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATG...TGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 90 bp | GCCTCGCTTTGTCTTCTTCTGCAGTATCTCTGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACACTACAGCATGGATGGGCTCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCLLLQYLCTLVQ*FPSRQHYSMDGLHP Trigger: CGGGTGGAGCCCATCCATGCTGTAGTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 90 bp | TTTGGAGGCCTGTTGGACCCAGCCTGGCCTCGCTTTGTCTTCTTCTaGAGTATCTCTGCACACTGGTCCAGTGATTTCCCTCTAGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FGGLLDPAWPRFVFF*SISAHWSSDFPLGN Trigger: GTTGCCTAGAGGGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 90 bp | CCTCAGTCTGGAAGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTaGTGGCGTGATACATGTCTTTGTTCCTTCTCTCTGGGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQSGRAAGSKPAWRS*WRDTCLCSFSLGYP Trigger: TGGATACCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCCAGACTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 90 bp | CCAGCCTGGCCTCGCTTTGTCTTCTTCTGCAGTATCTCTGCACACTaGTCCAGTGATTTCCCTCTAGGCAACACTACAGCATGGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAWPRFVFFCSISAH*SSDFPLGNTTAWMG Trigger: GCCCATCCATGCTGTAGTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CAA 90 bp | GTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTGGAGCAACCTGCAGTTCTCCTaGAACCGGCACTTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLFRHQGDSCLSAKAVWSNLQFS*NRHFPS Trigger: GGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGTT...GCTCCAAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATCATTTTGGAGGCCTGTaGGACCCAGCCTGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSTQQCSHSRLTRLIKGHHFGGL*DPAWPR Trigger: GCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATG...ATGCCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGCTGTTTAGGCATCAGGGTGACAGCTGTCTTTCTGCCAAGGCAGTTTAACCTGCAGTTCTCCTaGAACCGGCACTTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCCLGIRVTAVFLPRQFNLQFS*NRHFPS Trigger: GGAGGGAAAGTGCCGGTTCAAGGAGAACTGCAGGTT...AAACTGCCTTGGCAGAAAGACAGCTGTCACCCTGATGCCTAAACAGCACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTTTCTGCCAAGGCAGTTTGGAGCTGGGTCCCAGGGCTCTATCCACAATCATAGCTGGAGTCACTaGCATCACCAGTGTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVFLPRQFGAGSQGSIHNHSWSH*HHQCLS Trigger: ACTCAGACACTGGTGATGCAAGTGACTCCAGCTATG...ATTGTGGATAGAGCCCTGGGACCCAGCTCCAAACTGCCTTGGCAGAAAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 90 bp | CAATCTTCTCCTCAGTCTGGAAGAGCTGCAGGCTCAAAGCCTGCTTaGCGCTCTTGCTGGCGTGATACATGTCTTTGTTCCTTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSPQSGRAAGSKPA*RSCWRDTCLCSFSL Trigger: CAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCCAGACTGAGGAGAAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS-3UTR CAA 90 bp | CCCACCTCTACTCAGCAGTGTTCACACTCTAGGCTGACAAGGCTAATTAAGGGGCATAGCTGGAGTCACTaGCATCACCAGTGTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PTSTQQCSHSRLTRLIKGHSWSH*HHQCLS Trigger: ACTCAGACACTGGTGATGCAAGTGACTCCAGCTATG...CCCCTTAATTAGCCTTGTCAGCCTAGAGTGTGAACACTGCTGAGTAGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS-3UTR CAA 90 bp | GTTCAGCTGGTCTGTGACGGGTCTTGGGTCTCTTCTTTTAGGCTTGCAAACCCTCATAGCTGGAGTCACTaGCATCACCAGTGTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VQLVCDGSWVSSFRLANPHSWSH*HHQCLS Trigger: ACTCAGACACTGGTGATGCAAGTGACTCCAGCTATG...AGGGTTTGCAAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGACCAGCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116366.9 |
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| CDS TCA 90 bp | AGGCAGGATGCTGTCCCCCTCCACTACAGCCTCCTTCAGCAGCAATaGGTCAAACTTAACGGTATAGTAGCCATTGTCCACATCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RQDAVPLHYSLLQQQ*VKLNGIVAIVHISD Trigger: ATCACTGATGTGGACAATGGCTACTATACCGTTAAGTTTGACTCATTGCTGCTGAAGGAGGCTGTAGTGGAGGGGGACAGCATCCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 72 bp | GGCTGCACCTCGCTCCCAGGGGCCGTCTCCGAGTCATaGCAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCTSLPGAVSES*QGAPGASTSSA Trigger: TGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGGCCCCTGGGAGCGAGGTGCAGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 72 bp | GCTGCACCTCGCTCCCAGGGGCCGTCTCCGAGTCATTaGAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSQGPSPSH*RGRRALPLPPQ Trigger: TTGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGGCCCCTGGGAGCGAGGTGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 90 bp | GTGGATCCCGGCTGCACCTCGCTCCCAGGGGCCGTCTCCGAGTCATaGCAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCAATGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDPGCTSLPGAVSES*QGAPGASTSSAMAF Trigger: GAAGGCCATTGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCAATGACTCGGAGACGGCCCCTGGGAGCGAGGTGCAGCCGGGATCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | CTGGGTCCTCCTCCTCCTCCTCCAGTGCAGAGGAGGTaGATCCCGGCTGCACCTCGCTCCCAGGGGCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPPPPPPVQRR*IPAAPRSQGPS Trigger: AGACGGCCCCTGGGAGCGAGGTGCAGCCGGGATCCACCTCCTCTGCACTGGAGGAGGAGGAGGAGGACCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS GCA 72 bp | TGTGCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CAGQCSGLGPPG*PGCPVGSAQSS Trigger: AGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 72 bp | GGCGGCCCTCAGGTCTACTACCACTCCTCCGGCATTTaGGAGGCCTGTTGGACCCAGCCTGGCCTCGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGPQVYYHSSGI*EACWTQPGLAL Trigger: CAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAGACCTGAGGGCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 72 bp | TTCTCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSGQCSGLGPPG*PGCPVGSAQSS Trigger: AGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156258.2 |
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| CDS CCA 72 bp | TGCAGGGGGCGCCGGGCGCTTCCACTTCCTCCGCAATaGCCTTCTGGAAAGCCAGGTACTCAGCATCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CRGRRALPLPPQ*PSGKPGTQHPL Trigger: AAGAGGATGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGAGGAAGTGGAAGCGCCCGGCGCCCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | GCGGCCCTCAGGTCTACTACCACTCCTCCGGCATTTTaGAGGCCTGTTGGACCCAGCCTGGCCTCGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AALRSTTTPPAF*RPVGPSLASLC Trigger: ACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAGACCTGAGGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 72 bp | CCCGTGTGTGTACCTCCCAGCCAGCAAAGGCAGAACTaGAGGTCCCAGTGTCCACCGTGCTTGGTTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PVCVPPSQQRQN*RSQCPPCLVPP Trigger: TGGTGGAACCAAGCACGGTGGACACTGGGACCTGCAGTTCTGCCTTTGCTGGCTGGGAGGTACACACACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | TGGTCCAGTGATTTCCCTCTAGGCAACACTACAGCATaGATGGGCTCCACCCGGCCTTCTGCATGCCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WSSDFPLGNTTA*MGSTRPSACRP Trigger: GGGCCGGCATGCAGAAGGCCGGGTGGAGCCCATCCATGCTGTAGTGTTGCCTAGAGGGAAATCACTGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 72 bp | GTGAGCTCAATCAGCTCCTTTAGATCGCCCTGCAGCTaGCGCAGGTCCGCCTGCTCAGAAGCGTCTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSSISSFRSPCS*RRSACSEASRP Trigger: TGGCCTAGACGCTTCTGAGCAGGCGGACCTGCGTCAGCTGCAGGGCGATCTAAAGGAGCTGATTGAGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | ACATCAGTGATCCGTGCTGGGTGCCACAGGCCATCCTaGTGCTTGGCCAGACATGCAGAGCCAGTCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSVIRAGCHRPS*CLARHAEPVCS Trigger: ACTGCAGACTGGCTCTGCATGTCTGGCCAAGCACCAGGATGGCCTGTGGCACCCAGCACGGATCACTGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 90 bp | CCCAGCCAGCAAAGGCAGAACTGCAGGTCCCAGTGTCCACCGTGCTaGGTTCCACCACTCTGGCATAGCTGGAGTCACTTGCATCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSQQRQNCRSQCPPC*VPPLWHSWSHLHHQ Trigger: CTGGTGATGCAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAAGCACGGTGGACACTGGGACCTGCAGTTCTGCCTTTGCTGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 72 bp | GGTCTACTACCACTCCTCCGGCATTTTGGAGGCCTGTaGGACCCAGCCTGGCCTCGCTTTGTCTTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLPLLRHFGGL*DPAWPRFVFFC Trigger: GCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 72 bp | GCCGGCCCAAACCCTTGCCAAACTCATAGCCCATCTTaGCGAGGAGTTTGGAGCCAATGCCCCGTGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AGPNPCQTHSPS*RGVWSQCPVCV Trigger: TACACACACGGGGCATTGGCTCCAAACTCCTCGTCAAGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | AGGTCCCAGTGTCCACCGTGCTTGGTTCCACCACTCTaGCATAGCTGGAGTCACTTGCATCACCAGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSQCPPCLVPPL*HSWSHLHHQCL Trigger: CAGACACTGGTGATGCAAGTGACTCCAGCTATGCCAGAGTGGTGGAACCAAGCACGGTGGACACTGGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | GTCTACTACCACTCCTCCGGCATTTTGGAGGCCTGTTaGACCCAGCCTGGCCTCGCTTTGTCTTCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VYYHSSGILEAC*TQPGLALSSSA Trigger: TGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGAGTGGTAGTAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CAA 90 bp | TTCCTCCGCAATGGCCTTCTGGAAAGCCAGGTACTCAGCATCCTCTaGAGCTGGGCTCTCCTGGTCCACTGTAGACAGCAGCTTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLRNGLLESQVLSIL*SWALLVHCRQQLAL Trigger: AAGAGCAAGCTGCTGTCTACAGTGGACCAGGAGAGCCCAGCTCAAGAGGATGCTGAGTACCTGGCTTTCCAGAAGGCCATTGCGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CAA 90 bp | TCCTCCGGCATTTTGGAGGCCTGTTGGACCCAGCCTGGCCTCGCTTaGTCTTCTTCTGCAGTATCTCTGCACACTGGTCCAGTGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGILEACWTQPGLA*SSSAVSLHTGPVIS Trigger: GGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAATGCCGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 72 bp | CTTCTGGAAAGCCAGGTACTCAGCATCCTCTTGAGCTaGGCTCTCCTGGTCCACTGTAGACAGCAGCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLESQVLSILLS*ALLVHCRQQLA Trigger: AGCAAGCTGCTGTCTACAGTGGACCAGGAGAGCCCAGCTCAAGAGGATGCTGAGTACCTGGCTTTCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS CCA 72 bp | CTTGCTGGCGTGATACATGTCTTTGTTCCTTCTCTCTaGGGTATCCACCCCAGCATCTGGGGTCCCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LAGVIHVFVPSL*GIHPSIWGPRN Trigger: GTTCCTGGGACCCCAGATGCTGGGGTGGATACCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CCA 72 bp | AGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTGCTaGCGTGATACATGTCTTTGTTCCTTCTCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RAAGSKPAWRSC*RDTCLCSFSLG Trigger: CCCCAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 72 bp | GCAGAGCCAGTCTGCAGTAAGCTTAAGTCTGGATCCTaGAAGGGACGCAGCTCATCCACAGATACCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEPVCSKLKSGS*KGRSSSTDTTC Trigger: GCAGGTGGTATCTGTGGATGAGCTGCGTCCCTTTCAGGATCCAGACTTAAGCTTACTGCAGACTGGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
||
| CDS GCA 72 bp | CTGTTGGACCCAGCCTGGCCTCGCTTTGTCTTCTTCTaGAGTATCTCTGCACACTGGTCCAGTGATTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDPAWPRFVFF*SISAHWSSDFP Trigger: AGGGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS GCA 72 bp | GGAAGAGCTGCAGGCTCAAAGCCTGCTTGGCGCTCTTaGTGGCGTGATACATGTCTTTGTTCCTTCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRAAGSKPAWRS*WRDTCLCSFSL Trigger: CAGAGAGAAGGAACAAAGACATGTATCACGCCAGCAAGAGCGCCAAGCAGGCTTTGAGCCTGCAGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS CAA 72 bp | ATTTTGGAGGCCTGTTGGACCCAGCCTGGCCTCGCTTaGTCTTCTTCTGCAGTATCTCTGCACACTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ILEACWTQPGLA*SSSAVSLHTGP Trigger: TGGACCAGTGTGCAGAGATACTGCAGAAGAAGACAAAGCGAGGCCAGGCTGGGTCCAACAGGCCTCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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| CDS TCA 72 bp | GCTGTCCCCCTCCACTACAGCCTCCTTCAGCAGCAATaGGTCAAACTTAACGGTATAGTAGCCATTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AVPLHYSLLQQQ*VKLNGIVAIVH Trigger: GTGGACAATGGCTACTATACCGTTAAGTTTGACTCATTGCTGCTGAAGGAGGCTGTAGTGGAGGGGGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 |
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| CDS TCA 72 bp | TGTCTTCTTCTGCAGTATCTCTGCACACTGGTCCAGTaGTTTCCCTCTAGGCAACACTACAGCATGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: CLLLQYLCTLVQ*FPSRQHYSMDG Trigger: CCCATCCATGCTGTAGTGTTGCCTAGAGGGAAATCACTGGACCAGTGTGCAGAGATACTGCAGAAGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029105.12 ENSMUST00000108807.9 ENSMUST00000116366.9 ENSMUST00000156258.2 |
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