Pregenerated sensors for ZGLP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079681Ensembl transcript IDs: ENSMUST00000115494.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGGACTCTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATGGCCTCACTGCTTCCTaGGCTGGCCAGAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GTLGLRPDSPTGIPVSLHGLTAS*AGQSLG Trigger: TCCAAGGCTCTGGCCAGCCCAGGAAGCAGTGAGGCC...ATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAGAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | ACTCTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTGGCTGGCCAGAGCCTTaGAAGGGCTTGCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: TLGLRPDSPTGIPVSLHCGWPEP*KGLQEA Trigger: AGCTTCCTGCAAGCCCTTCCAAGGCTCTGGCCAGCC...ACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | GGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAAGGCACTGTGTGCCCCTaGGATTCCTGGCCATACTCA | + |
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Preference number: 4 (lower is better) Translates to: GLRPDSPTGIPVSLHCLQGTVCP*DSWPYS Trigger: TGAGTATGGCCAGGAATCCCAGGGGCACACAGTGCC...TTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | GGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATTACAGTTCCTGGGTTaGGCTGAGGTGGGGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GLRPDSPTGIPVSLHCLQLQFLG*AEVGVL Trigger: CAGGACCCCCACCTCAGCCCAACCCAGGAACTGTAA...TTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR GCA 90 bp | CTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCATTCGCGGGTTTAGCTaGTTCCGTGGTCTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGLRPDSPTGIPVSLHCLIRGFS*FRGLLW Trigger: CCAGAGAAGACCACGGAAGCAGCTAAACCCGCGAAT...GAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAAACTAAGAAGCACACCGCCTaGGCCCAAGGGCCTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LTLPLGSLSASIVSNRETKKHTA*AQGPHC Trigger: GCAGTGAGGCCCTTGGGCCCAGGCGGTGTGCTTCTT...AGTTTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR TCA 90 bp | CTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAAACTCCAGAGTTACCCCCTTaGACCTGGGGTCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTLPLGSLSASIVSNRETPELPP*TWGPPS Trigger: AGAAGGTGGACCCCAGGTTCAAGGGGGTAACTCTGG...AGTTTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTTGCAGGAAGCTTTTGTaGACAACTTCTTCCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: TLGLRPDSPTGIPVSLHCCRKLL*TTSSRQ Trigger: TTGCCTGGAAGAAGTTGTTCACAAAAGCTTCCTGCA...ACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCATATTTCTTGTACCTaGTGCCACAGGCATTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLGLRPDSPTGIPVSLHCHISCT*CHRHCR Trigger: TCTGCAATGCCTGTGGCATCAGGTACAAGAAATATG...ACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR GCA 90 bp | CTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGGGACATCCCACACCTaGCACAGAGCCTTTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTLPLGSLSASIVSNRETGTSHT*HRAFWA Trigger: AGCCCAAAAGGCTCTGTGGCAGGTGTGGGATGTCCC...AGTTTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR TCA 90 bp | GCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGGTAAAGTTCCTGGGTTGGGCTaGGGTGGGGGTCCTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: ASIVSNRETETKLTWLGKVPGLG*GGGPGT Trigger: TGTCCCAGGACCCCCACCTCAGCCCAACCCAGGAAC...TTTACCTAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | GGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAACATAGTGGAGTCCTCTaGGTTCTACAAGAAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: GLTLPLGSLSASIVSNREHSGVL*VLQEAH Trigger: GTGTGCTTCTTGTAGAACCCAGAGGACTCCACTATG...TTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAAACTCTGGCCATACTCAGGTaGTCTGACATTCCTATGACC | + |
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Preference number: 4 (lower is better) Translates to: LTLPLGSLSASIVSNRETLAILR*SDIPMT Trigger: GGTCATAGGAATGTCAGACCACCTGAGTATGGCCAG...AGTTTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATAGAGAAACTTTCCGTGGTCTTCTCTaGAGTGAGGCAGGAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LTLPLGSLSASIVSNRETFRGLL*SEAGEV Trigger: TACTTCTCCTGCCTCACTCCAGAGAAGACCACGGAA...AGTTTCTCTATTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGAATCCGGCTGGATCTaGAACTCCAGAGTTACCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSASIVSNRETETKLTWLESGWI*NSRVTP Trigger: GGGGGTAACTCTGGAGTTCCAGATCCAGCCGGATTC...TAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGCTGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTATGGTCTTCTCTGGAGTaGGGCAGGAGAAGTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: LSASIVSNRETETKLTWLWSSLE*GRRSST Trigger: AGTGCTACTTCTCCTGCCTCACTCCAGAGAAGACCA...TAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGCTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR GCA 90 bp | GCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGGTAAAGCCTTTTGGGCTGGATaGTTTTCCTTGGGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ASIVSNRETETKLTWLGKAFWAG*FSLGPA Trigger: GGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGC...TTTACCTAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGGACCAGCCAGCAACTaGAACAACGGGTGCCATATT | + |
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Preference number: 4 (lower is better) Translates to: LSASIVSNRETETKLTWLGPASN*NNGCHI Trigger: AATATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCC...TAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGCTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTACCCTTTTCTTTCTCTTaGAGGAAAGGCAATGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSASIVSNRETETKLTWLPFSFS*RKGNAV Trigger: CACTGCATTGCCTTTCCTCCAAGAGAAAGAAAAGGG...TAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGCTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS TCA 90 bp | TGCCCCTGGGATTCCTGGCCATACTCAGGTGGTCTGACATTCCTATaGCCATCAGCTCCCAGCACGACCCCAGGACCTGGGTGGCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: CPWDSWPYSGGLTFL*PSAPSTTPGPGWPA Trigger: CGCCGGCCACCCAGGTCCTGGGGTCGTGCTGGGAGCTGATGGTCATAGGAATGTCAGACCACCTGAGTATGGCCAGGAATCCCAGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 90 bp | CAGAGGGGTGTCCCATCTTCAGCGTCTCTCCATAGTGGAGTCCTCTaGGTTCTACAAGAAGCACACCGCCTGGGCCCAAGGGCCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: QRGVPSSASLHSGVL*VLQEAHRLGPRASL Trigger: CAGTGAGGCCCTTGGGCCCAGGCGGTGTGCTTCTTGTAGAACCCAGAGGACTCCACTATGGAGAGACGCTGAAGATGGGACACCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CAA 90 bp | GGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTCCAATCCAGAGTTACCCCCTaGAACCTGGGGTCCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLRPDSPTGIPVSLHCLQSRVTP*NLGSTF Trigger: GAAGGTGGACCCCAGGTTCAAGGGGGTAACTCTGGA...TTGGAGACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CAA 90 bp | ACTCTGGGCCTGAGGCCTGACTCTCCCACTGGGATCCCTGTCAGCCTCCATTGTCTGATGCCACAGGCATaGCAGAGGGGTGTCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: TLGLRPDSPTGIPVSLHCLMPQA*QRGVPS Trigger: AGATGGGACACCCCTCTGCAATGCCTGTGGCATCAG...ACAATGGAGGCTGACAGGGATCCCAGTGGGAGAGTCAGGCCTCAGGCCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 90 bp | GGTCCTGGGACATCCCACACCTGCCACAGAGCCTTTTGGGCTGGATaGTTTTCCTTGGGACCAGCCAGCAACTGGAACAACGGGTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GPGTSHTCHRAFWAG*FSLGPASNWNNGCH Trigger: ATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGTGTGGGATGTCCCAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 90 bp | AGGTTAGGGCACTGTGTGCCCCTGGGATTCCTGGCCATACTCAGGTaGTCTGACATTCCTATGACCATCAGCTCCCAGCACGACCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RLGHCVPLGFLAILR*SDIPMTISSQHDPR Trigger: CCTGGGGTCGTGCTGGGAGCTGATGGTCATAGGAATGTCAGACCACCTGAGTATGGCCAGGAATCCCAGGGGCACACAGTGCCCTAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 90 bp | TTGAACCTGGGGTCCACCTTCTCAATACCCATTCGCGGGTTTAGCTaGTTCCGTGGTCTTCTCTGGAGTGAGGCAGGAGAAGTAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LNLGSTFSIPIRGFS*FRGLLWSEAGEVAL Trigger: CAGTGCTACTTCTCCTGCCTCACTCCAGAGAAGACCACGGAAGCAGCTAAACCCGCGAATGGGTATTGAGAAGGTGGACCCCAGGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 90 bp | CATCCCACACCTGCCACAGAGCCTTTTGGGCTGGATGCTTTTCCTTaGGACCAGCCAGCAACTGGAACAACGGGTGCCATATTTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: HPTPATEPFGLDAFP*DQPATGTTGAIFLV Trigger: TACAAGAAATATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGTGTGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 90 bp | TTTTCTTTCTCTTGGAGGAAAGGCAATGCAGTGCTGACCGAGTCCTaGCATGTAGGCCACAGAGACCTGATATTGGGAGTGAGGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: FSFSWRKGNAVLTES*HVGHRDLILGVRHL Trigger: GAGATGCCTCACTCCCAATATCAGGTCTCTGTGGCCTACATGCCAGGACTCGGTCAGCACTGCATTGCCTTTCCTCCAAGAGAAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CAA 90 bp | CTGTCAGCCTCCATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGAGCCTTGGAAGGGCTaGCAGGAAGCTTTTGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LSASIVSNRETETKLTWLEPWKG*QEAFVN Trigger: GTTCACAAAAGCTTCCTGCAAGCCCTTCCAAGGCTC...TAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAATGGAGGCTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS-3UTR CAA 90 bp | ATTGTCTCCAATAGAGAAACTGAGACAAAGCTGACTTGGCTAGGTAAAGAAGGGCACAGAGACCTGATATaGGGAGTGAGGCATCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: IVSNRETETKLTWLGKEGHRDLI*GVRHLR Trigger: CCTGAGATGCCTCACTCCCAATATCAGGTCTCTGTG...CCCTTCTTTACCTAGCCAAGTCAGCTTTGTCTCAGTTTCTCTATTGGAGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 72 bp | CCTATGACCATCAGCTCCCAGCACGACCCCAGGACCTaGGTGGCCGGCGAAGGGGAACCCGGCAGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: PMTISSQHDPRT*VAGEGEPGSPF Trigger: AAAGGGACTGCCGGGTTCCCCTTCGCCGGCCACCCAGGTCCTGGGGTCGTGCTGGGAGCTGATGGTCATAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 72 bp | TACAAGAAGCACACCGCCTGGGCCCAAGGGCCTCACTaGTTCCTGGGCTGGCCAGAGCCTTGGAAGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YKKHTAWAQGPH*FLGWPEPWKGL Trigger: CAAGCCCTTCCAAGGCTCTGGCCAGCCCAGGAAGCAGTGAGGCCCTTGGGCCCAGGCGGTGTGCTTCTTGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 90 bp | CTGGGTGGCCGGCGAAGGGGAACCCGGCAGTCCCTTTTCTTTCTCTaGGAGGAAAGGCAATGCAGTGCTGACCGAGTCCTGGCATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LGGRRRGTRQSLFFL*EERQCSADRVLACR Trigger: CCTACATGCCAGGACTCGGTCAGCACTGCATTGCCTTTCCTCCAAGAGAAAGAAAAGGGACTGCCGGGTTCCCCTTCGCCGGCCACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 90 bp | CTGAGGTGGGGGTCCTGGGACATCCCACACCTGCCACAGAGCCTTTaGGGCTGGATGCTTTTCCTTGGGACCAGCCAGCAACTGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LRWGSWDIPHLPQSL*GWMLFLGTSQQLEQ Trigger: TTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGTGTGGGATGTCCCAGGACCCCCACCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS TCA 72 bp | GATTCCTGGCCATACTCAGGTGGTCTGACATTCCTATaGCCATCAGCTCCCAGCACGACCCCAGGACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DSWPYSGGLTFL*PSAPSTTPGPG Trigger: CCCAGGTCCTGGGGTCGTGCTGGGAGCTGATGGTCATAGGAATGTCAGACCACCTGAGTATGGCCAGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 72 bp | GTCCCATCTTCAGCGTCTCTCCATAGTGGAGTCCTCTaGGTTCTACAAGAAGCACACCGCCTGGGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VPSSASLHSGVL*VLQEAHRLGPR Trigger: CCTTGGGCCCAGGCGGTGTGCTTCTTGTAGAACCCAGAGGACTCCACTATGGAGAGACGCTGAAGATGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 90 bp | CAAGGGCCTCACTGCTTCCTGGGCTGGCCAGAGCCTTGGAAGGGCTaGCAGGAAGCTTTTGTGAACAACTTCTTCCAGGCAAGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: QGPHCFLGWPEPWKG*QEAFVNNFFQASCR Trigger: CCTACAGCTTGCCTGGAAGAAGTTGTTCACAAAAGCTTCCTGCAAGCCCTTCCAAGGCTCTGGCCAGCCCAGGAAGCAGTGAGGCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 72 bp | GTGGGTACAATCTGGAGGCTAGAATCCGGCTGGATCTaGAACTCCAGAGTTACCCCCTTGAACCTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VGTIWRLESGWI*NSRVTPLNLGS Trigger: GGACCCCAGGTTCAAGGGGGTAACTCTGGAGTTCCAGATCCAGCCGGATTCTAGCCTCCAGATTGTACCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 72 bp | CCTGCCACAGAGCCTTTTGGGCTGGATGCTTTTCCTTaGGACCAGCCAGCAACTGGAACAACGGGTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: PATEPFGLDAFP*DQPATGTTGAI Trigger: TATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 72 bp | ACCTGCCACAGAGCCTTTTGGGCTGGATGCTTTTCCTaGGGACCAGCCAGCAACTGGAACAACGGGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TCHRAFWAGCFS*GPASNWNNGCH Trigger: ATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS TCA 72 bp | AATCCGGCTGGATCTGGAACTCCAGAGTTACCCCCTTaGACCTGGGGTCCACCTTCTCAATACCCATTCGCG | + |
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Preference number: 6 (lower is better) Translates to: NPAGSGTPELPP*TWGPPSQYPFA Trigger: CGCGAATGGGTATTGAGAAGGTGGACCCCAGGTTCAAGGGGGTAACTCTGGAGTTCCAGATCCAGCCGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 72 bp | CGGCAGTCCCTTTTCTTTCTCTTGGAGGAAAGGCAATaGAGTGCTGACCGAGTCCTGGCATGTAGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RQSLFFLLEERQ*SADRVLACRPQ Trigger: CTGTGGCCTACATGCCAGGACTCGGTCAGCACTGCATTGCCTTTCCTCCAAGAGAAAGAAAAGGGACTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 72 bp | GGGTCCACCTTCTCAATACCCATTCGCGGGTTTAGCTaGTTCCGTGGTCTTCTCTGGAGTGAGGCAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GSTFSIPIRGFS*FRGLLWSEAGE Trigger: TTCTCCTGCCTCACTCCAGAGAAGACCACGGAAGCAGCTAAACCCGCGAATGGGTATTGAGAAGGTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS GCA 72 bp | ACATCCCACACCTGCCACAGAGCCTTTTGGGCTGGATaGTTTTCCTTGGGACCAGCCAGCAACTGGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: TSHTCHRAFWAG*FSLGPASNWNN Trigger: GTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGTGTGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 72 bp | GAATCCGGCTGGATCTGGAACTCCAGAGTTACCCCCTaGAACCTGGGGTCCACCTTCTCAATACCCATTCGC | + |
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Preference number: 6 (lower is better) Translates to: ESGWIWNSRVTP*NLGSTFSIPIR Trigger: GCGAATGGGTATTGAGAAGGTGGACCCCAGGTTCAAGGGGGTAACTCTGGAGTTCCAGATCCAGCCGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 72 bp | CACTGCTTCCTGGGCTGGCCAGAGCCTTGGAAGGGCTaGCAGGAAGCTTTTGTGAACAACTTCTTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HCFLGWPEPWKG*QEAFVNNFFQA Trigger: TGCCTGGAAGAAGTTGTTCACAAAAGCTTCCTGCAAGCCCTTCCAAGGCTCTGGCCAGCCCAGGAAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS TCA 72 bp | GGCCAGAGCCTTGGAAGGGCTTGCAGGAAGCTTTTGTaGACAACTTCTTCCAGGCAAGCTGTAGGTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GQSLGRACRKLL*TTSSRQAVGGY Trigger: GTACCCACCTACAGCTTGCCTGGAAGAAGTTGTTCACAAAAGCTTCCTGCAAGCCCTTCCAAGGCTCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CCA 72 bp | TCTTGGAGGAAAGGCAATGCAGTGCTGACCGAGTCCTaGCATGTAGGCCACAGAGACCTGATATTGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SWRKGNAVLTES*HVGHRDLILGV Trigger: CACTCCCAATATCAGGTCTCTGTGGCCTACATGCCAGGACTCGGTCAGCACTGCATTGCCTTTCCTCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 72 bp | ACCAGCCAGCAACTGGAACAACGGGTGCCATATTTCTaGTACCTGATGCCACAGGCATTGCAGAGGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TSQQLEQRVPYF*YLMPQALQRGV Trigger: GACACCCCTCTGCAATGCCTGTGGCATCAGGTACAAGAAATATGGCACCCGTTGTTCCAGTTGCTGGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS CAA 90 bp | ACATCCCACACCTGCCACAGAGCCTTTTGGGCTGGATGCTTTTCCTaGGGACCAGCCAGCAACTGGAACAACGGGTGCCATATTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TSHTCHRAFWAGCFS*GPASNWNNGCHISC Trigger: ACAAGAAATATGGCACCCGTTGTTCCAGTTGCTGGCTGGTCCCAAGGAAAAGCATCCAGCCCAAAAGGCTCTGTGGCAGGTGTGGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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| CDS TCA 72 bp | AGCAACTGGAACAACGGGTGCCATATTTCTTGTACCTaGTGCCACAGGCATTGCAGAGGGGTGTCCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SNWNNGCHISCT*CHRHCRGVSHL Trigger: AAGATGGGACACCCCTCTGCAATGCCTGTGGCATCAGGTACAAGAAATATGGCACCCGTTGTTCCAGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115494.3 |
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