Pregenerated sensors for ZG16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049350Ensembl transcript IDs: ENSMUST00000051122.7, ENSMUST00000205424.2, ENSMUST00000205559.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCCACACACAGCACCCCTaGCAGAAAGGAAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPHTQHP*QKGRWV Trigger: AACCCACCTTCCTTTCTGTCAGGGGTGCTGTGTGTG...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCACACACAGCACCCCTaGCAGAAAGGAAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVHTQHP*QKGRWV Trigger: AACCCACCTTCCTTTCTGTCAGGGGTGCTGTGTGTG...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCGGATACGGAAGGCGGTaGTGGGGCCGTCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPGYGRR*WGRPAG Trigger: ACCAGCTGGACGGCCCCATCACCGCCTTCCGTATCC...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCGGCCGTCCAGCTGGTTaGCAGAATGAGAGAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPGRPAG*QNERIA Trigger: AGCGATTCTCTCATTCTGGCAACCAGCTGGACGGCC...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCAGTCACTCCACACTGTaGCATAGCGCACCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPSHSTL*HSAPGD Trigger: GTCTCCAGGTGCGCTATGGCACAGTGTGGAGTGACT...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCACAGATTCCCCGGGGTaGAGAAAGATCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPTDSPG*RKISSR Trigger: CCTGGAGGAGATCTTTCTGCACCCCGGGGAATCTGT...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCAGGACAGTGTTGGGATaGAAGGGAACAGCGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPRTVLG*KGTALK Trigger: TTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCT...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCGGATACGGAAGGCGGTaGTGGGGCCGTCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSYLHTFMGLGDKGVLGYGRR*WGRPAG Trigger: ACCAGCTGGACGGCCCCATCACCGCCTTCCGTATCC...GAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCAGTCACTCCACACTGTaGCATAGCGCACCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSYLHTFMGLGDKGVLSHSTL*HSAPGD Trigger: GTCTCCAGGTGCGCTATGGCACAGTGTGGAGTGACT...GAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCCCAGGTCTCCCTGTGTaGCACCTACATAGTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSYLHTFMGLGDKGVLPGLPV*HLHSHS Trigger: GGAGTGACTATGTAGGTGGCACACAGGGAGACCTGG...GAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCGAGGATGTCCTGGACTaGATGGAATTAGCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSYLHTFMGLGDKGVLEDVLD*MELAEA Trigger: GGCCTCTGCTAATTCCATTCAGTCCAGGACATCCTC...GAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTGGCCGTCCAGCTGGTTaGCAGAATGAGAGAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVGRPAG*QNERIA Trigger: AGCGATTCTCTCATTCTGGCAACCAGCTGGACGGCC...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTACAGATTCCCCGGGGTaGAGAAAGATCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVTDSPG*RKISSR Trigger: CCTGGAGGAGATCTTTCTGCACCCCGGGGAATCTGT...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTGAGGATGTCCTGGACTaGATGGAATTAGCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVEDVLD*MELAEA Trigger: GGCCTCTGCTAATTCCATTCAGTCCAGGACATCCTC...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTAACGGAGGACAGTGTTaGGATGCAAGGGAACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVNGGQC*DAREQR Trigger: ACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTT...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTAGCTGGTTGCCAGAATaGGAGAATCGCTTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVSWLPE*ENRFPP Trigger: AGGAGGAAAGCGATTCTCTCATTCTGGCAACCAGCT...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTGTTGAAACTTGTGCCTaGGGCTTTTCCAAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVVETCA*GFSKRQ Trigger: CTGCCTTTTGGAAAAGCCTCAGGCACAAGTTTCAAC...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTAGGACAGTGTTGGGATaGAAGGGAACAGCGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVRTVLG*KGTALK Trigger: TTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCT...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 90 bp | CAGATTCCCCGGGGTGCAGAAAGATCTCCTCCAGGTCTCCCTGTGTaGCACCTACATAGTCACTCCACACTGTGCCATAGCGCACCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QIPRGAERSPPGLPV*HLHSHSTLCHSAPG Trigger: TCCAGGTGCGCTATGGCACAGTGTGGAGTGACTATGTAGGTGGCACACAGGGAGACCTGGAGGAGATCTTTCTGCACCCCGGGGAATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 ENSMUST00000205559.2 |
||
| CDS TCA 90 bp | CAGGTAGCGGCCCTTGTCCGTCACGAAGATCATCTGCTTCACGTATaGTTTGTACTTGCCAGACACCTGGATCACAGATTCCCCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVAALVRHEDHLLHV*FVLARHLDHRFPGV Trigger: CACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGACGGACAAGGGCCGCTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS TCA 90 bp | GAGGACAGTGTTGGGATGCAAGGGAACAGCGTTGAAACTTGTGCCTaGGGCTTTTCCAAAAGGCAGGTAGCGGCCCTTGTCCGTCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGMQGNSVETCA*GFSKRQVAALVRHE Trigger: TTCGTGACGGACAAGGGCCGCTACCTGCCTTTTGGAAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR CAA 90 bp | TTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTCTCACCACCACCACCCCCAAACGGAGGACAGTGTaGGGATGCAAGGGAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHTFMGLGDKGVLTTTTPKRRTV*GCKGTA Trigger: CGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTT...GGGGGTGGTGGTGGTGAGAACTCCCTTATCACCAAGCCCCATGAAAGTATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 90 bp | GCAGAGCCAGATCGCCCACTAATGAAACGGAGGACAGTGTTGGGATaGAAGGGAACAGCGTTGAAACTTGTGCCTGAGGCTTTTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AEPDRPLMKRRTVLG*KGTALKLVPEAFPK Trigger: TTTTGGAAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTTCATTAGTGGGCGATCTGGCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 90 bp | CCTTGTCCGTCACGAAGATCATCTGCTTCACGTATGATTTGTACTTaGCAGACACCTGGATCACAGATTCCCCGGGGTGCAGAAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PCPSRRSSASRMICT*QTPGSQIPRGAERS Trigger: AGATCTTTCTGCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGACGGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CCA 90 bp | ACGAAGATCATCTGCTTCACGTATGATTTGTACTTGCCAGACACCTaGATCACAGATTCCCCGGGGTGCAGAAAGATCTCCTCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKIICFTYDLYLPDT*ITDSPGCRKISSRS Trigger: AGACCTGGAGGAGATCTTTCTGCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTTGCAAGGGAACAGCGTaGAAACTTGTGCCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVCKGTA*KLVPEA Trigger: AGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCA...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTATTAAGCTATTTGCATACTTTCATGGGGCTTGGTGATAAGGGAGTTACGTATGATTTGTACTaGCCAGACACCTGGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ILLLSYLHTFMGLGDKGVTYDLY*PDTWIT Trigger: TGTGATCCAGGTGTCTGGCAAGTACAAATCATACGT...AACTCCCTTATCACCAAGCCCCATGAAAGTATGCAAATAGCTTAATAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 72 bp | CGGGGTGCAGAAAGATCTCCTCCAGGTCTCCCTGTGTaGCACCTACATAGTCACTCCACACTGTGCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGAERSPPGLPV*HLHSHSTLCHS Trigger: GCTATGGCACAGTGTGGAGTGACTATGTAGGTGGCACACAGGGAGACCTGGAGGAGATCTTTCTGCACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 ENSMUST00000205559.2 |
||
| CDS TCA 72 bp | AAGGCGGTGATGGGGCCGTCCAGCTGGTTGCCAGAATaGGAGAATCGCTTTCCTCCTTTACCTCCATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: KAVMGPSSWLPE*ENRFPPLPPYS Trigger: AGAGTATGGAGGTAAAGGAGGAAAGCGATTCTCTCATTCTGGCAACCAGCTGGACGGCCCCATCACCGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 ENSMUST00000205559.2 |
||
| CDS TCA 72 bp | GTTGGGATGCAAGGGAACAGCGTTGAAACTTGTGCCTaGGGCTTTTCCAAAAGGCAGGTAGCGGCCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGMQGNSVETCA*GFSKRQVAALV Trigger: GACAAGGGCCGCTACCTGCCTTTTGGAAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 72 bp | CTCCCTGTGTGCCACCTACATAGTCACTCCACACTGTaGCATAGCGCACCTGGAGACCTACTATGTAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LPVCHLHSHSTL*HSAPGDLLCSI Trigger: GATACTACATAGTAGGTCTCCAGGTGCGCTATGGCACAGTGTGGAGTGACTATGTAGGTGGCACACAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 ENSMUST00000205559.2 |
||
| CDS GCA 72 bp | GATCGCCCACTAATGAAACGGAGGACAGTGTTGGGATaGAAGGGAACAGCGTTGAAACTTGTGCCTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRPLMKRRTVLG*KGTALKLVPEA Trigger: AGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTTCATTAGTGGGCGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 72 bp | GAGCCAGATCGCCCACTAATGAAACGGAGGACAGTGTaGGGATGCAAGGGAACAGCGTTGAAACTTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EPDRPLMKRRTV*GCKGTALKLVP Trigger: AGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTTCATTAGTGGGCGATCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 90 bp | CCCTTGTCCGTCACGAAGATCATCTGCTTCACGTATGATTTGTACTaGCCAGACACCTGGATCACAGATTCCCCGGGGTGCAGAAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PLSVTKIICFTYDLY*PDTWITDSPGCRKI Trigger: GATCTTTCTGCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGACGGACAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 90 bp | TCTATGGCAGAGCCAGATCGCCCACTAATGAAACGGAGGACAGTGTaGGGATGCAAGGGAACAGCGTTGAAACTTGTGCCTGAGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SMAEPDRPLMKRRTV*GCKGTALKLVPEAF Trigger: AAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTTCATTAGTGGGCGATCTGGCTCTGCCATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS TCA 72 bp | AACGGAGGACAGTGTTGGGATGCAAGGGAACAGCGTTaGAACTTGTGCCTGAGGCTTTTCCAAAAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: NGGQCWDAREQR*NLCLRLFQKAG Trigger: ACCTGCCTTTTGGAAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 72 bp | GTCACGAAGATCATCTGCTTCACGTATGATTTGTACTaGCCAGACACCTGGATCACAGATTCCCCGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VTKIICFTYDLY*PDTWITDSPGC Trigger: GCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 72 bp | AAACGGAGGACAGTGTTGGGATGCAAGGGAACAGCGTaGAAACTTGTGCCTGAGGCTTTTCCAAAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRRTVLGCKGTA*KLVPEAFPKGR Trigger: CCTGCCTTTTGGAAAAGCCTCAGGCACAAGTTTCAACGCTGTTCCCTTGCATCCCAACACTGTCCTCCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS GCA 72 bp | TCACGAAGATCATCTGCTTCACGTATGATTTGTACTTaGCAGACACCTGGATCACAGATTCCCCGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRSSASRMICT*QTPGSQIPRGA Trigger: TGCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CCA 72 bp | ATCTGCTTCACGTATGATTTGTACTTGCCAGACACCTaGATCACAGATTCCCCGGGGTGCAGAAAGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICFTYDLYLPDT*ITDSPGCRKIS Trigger: GGAGATCTTTCTGCACCCCGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS TCA 72 bp | GCCCTTGTCCGTCACGAAGATCATCTGCTTCACGTATaGTTTGTACTTGCCAGACACCTGGATCACAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: ALVRHEDHLLHV*FVLARHLDHRF Trigger: GAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGACGGACAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||
| CDS CAA 72 bp | TTGTCCGTCACGAAGATCATCTGCTTCACGTATGATTaGTACTTGCCAGACACCTGGATCACAGATTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSVTKIICFTYD*YLPDTWITDSP Trigger: CGGGGAATCTGTGATCCAGGTGTCTGGCAAGTACAAATCATACGTGAAGCAGATGATCTTCGTGACGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051122.7 ENSMUST00000205424.2 |
||