Pregenerated sensors for ZFY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000103Ensembl transcript IDs: ENSMUST00000115891.2, ENSMUST00000187148.7
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTGATTTTTGTTTTGGTACTCTGTCAAGGCCACCAGATTCATCATaGTGTAACATAGCACTGGCAGTGGCATTCTGCACTTCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FDFCFGTLSRPPDSS*CNIALAVAFCTSIS Trigger: TGAAATTGAAGTGCAGAATGCCACTGCCAGTGCTATGTTACACCATGATGAATCTGGTGGCCTTGACAGAGTACCAAAACAAAAATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115891.2 ENSMUST00000187148.7 |
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| CDS CCA 72 bp | TGTTTTGGTACTCTGTCAAGGCCACCAGATTCATCATaGTGTAACATAGCACTGGCAGTGGCATTCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CFGTLSRPPDSS*CNIALAVAFCT Trigger: AGTGCAGAATGCCACTGCCAGTGCTATGTTACACCATGATGAATCTGGTGGCCTTGACAGAGTACCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115891.2 ENSMUST00000187148.7 |
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| CDS TCA 72 bp | GACTCTGCATTCATGGTAACTTCAGAGGAACCTTCATaGTCTGTTTTGCTAGGCTCATCCAAAGACATCATT | + |
|
Preference number: 6 (lower is better) Translates to: DSAFMVTSEEPS*SVLLGSSKDII Trigger: AATGATGTCTTTGGATGAGCCTAGCAAAACAGATCATGAAGGTTCCTCTGAAGTTACCATGAATGCAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115891.2 ENSMUST00000187148.7 |
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| CDS TCA 72 bp | TTGTTGACTCCTTTTTCTGTATGCATTGTCCCAGCATaGGAAAGATTCTTCCTACAGTCATCACATTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTPFSVCIVPA*ERFFLQSSHSV Trigger: CACCGAATGTGATGACTGTAGGAAGAATCTTTCTCATGCTGGGACAATGCATACAGAAAAAGGAGTCAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115891.2 ENSMUST00000187148.7 |
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