Pregenerated sensors for ZFY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053211Ensembl transcript IDs: ENSMUST00000065545.6, ENSMUST00000189888.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTGTGGCGCTTAAAACCTaGGGCATCTTTGGTGCTATA | + |
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Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVVALKT*GIFGAI Trigger: TATAGCACCAAAGATGCCTCAGGTTTTAAGCGCCAC...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGATGCTCAGGAGTATCTaGAGCTGTGCCACCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMMLRSI*SCATSI Trigger: GATGCTGGTGGCACAGCTGCAGATACTCCTGAGCAT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTAGAGAGCACTGGCAGTaGCATTCTGGTCTTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVREHWQ*HSGLQF Trigger: AAATTGAAGACCAGAATGTCACTGCCAGTGCTCTCT...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGAGTATCTGCAGCTGTaGCACCAGCATCTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMEYLQL*HQHLHL Trigger: GAGATGAAGATGCTGGTGGCACAGCTGCAGATACTC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCCAGAGGCATCCCACTaGAATCTAAGACTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMPEASH*NLRLLQ Trigger: CTGAAGCAGTCTTAGATTCCAGTGGGATGCCTCTGG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCGAATGCTAGTGCTCTaGTCTGTGACTTCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMRMLVL*SVTSAS Trigger: TGAAGCTGAAGTCACAGATCAGAGCACTAGCATTCG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTCTGACATATAAATGTTaGCTCTGGGAACACGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVLTYKC*LWEHEC Trigger: GCATTCGTGTTCCCAGAGTCAACATTTATATGTCAG...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTGTATGCATTGTTTTGTaGGTACACAAAGTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVVCIVL*VHKVPA Trigger: TGCTGGGACTTTGTGTACTCACAAAACAATGCATAC...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTTGAGTGCTGATGGGTaGCGGAAACCTTTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLSADG*RKPLPH Trigger: ATGTGGTAAAGGTTTCCGTCACCCATCAGCACTCAA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGTGGCGCTTAAAACCTaGGGCATCTTTGGTGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMVALKT*GIFGAI Trigger: TATAGCACCAAAGATGCCTCAGGTTTTAAGCGCCAC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTCCATCTGTTGCTCATaGTCAGGAGTATCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSICCS*SGVSAA Trigger: AGCTGCAGATACTCCTGAGCATGAGCAACAGATGGA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTAACATTGATGTGTTCTaGTTTCTTGGTGCAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVNIDVF*FLGAER Trigger: CCGTTCTGCACCAAGAAAGCAGAACACATCAATGTT...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTCCGGAATCCTTTCTTaGAGAAGTCACAGCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSGILS*RSHSCE Trigger: CTCACAGCTGTGACTTCTGCAAGAAAGGATTCCGGA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTTCTTCTTCTTCCTTTTaGGAATCACTGGCTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVSSSSF*ESLADI Trigger: TATGTCAGCCAGTGATTCTCAAAAGGAAGAAGAAGA...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAGAGAGCACTGGCAGTaGCATTCTGGTCTTCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMREHWQ*HSGLQF Trigger: AAATTGAAGACCAGAATGTCACTGCCAGTGCTCTCT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTCTTATGGTTGCAATGTaGACATTGATGTGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVLMVAM*TLMCSA Trigger: AGCAGAACACATCAATGTTCACATTGCAACCATAAG...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTATTCTTTGTGTGAGCTaGGAGAATATGGTGACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVILCVS*ENMVTK Trigger: CTTAGTCACCATATTCTCTCAGCTCACACAAAGAAT...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTGTCGCATTATGTGTTaGTTCTTTTCCGAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMCRIMC*FFSEGL Trigger: GAGACCCTCGGAAAAGAATCAACACATAATGCGACA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTCAAGTTGGAAGAGTCTaGAGACTTGTACTCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVQVGRV*RLVLTI Trigger: TATTGTGAGTACAAGTCTGCAGACTCTTCCAACTTG...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTATCTTGAATTATAACTaGGCCTGGATTATCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVILNYN*AWIIRN Trigger: GTTCCTGATAATCCAGGCTCAGTTATAATTCAAGAT...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAGAAGAATCAGTTCCTaGCTCTGCATTCATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMRRISS*LCIHGN Trigger: GTTACCATGAATGCAGAGTCAGGAACTGATTCTTCT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCTGACATATAAATGTTaGCTCTGGGAACACGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLTYKC*LWEHEC Trigger: GCATTCGTGTTCCCAGAGTCAACATTTATATGTCAG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGTATGCATTGTTTTGTaGGTACACAAAGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMVCIVL*VHKVPA Trigger: TGCTGGGACTTTGTGTACTCACAAAACAATGCATAC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCATTCTCCACAAATGTaGGGAAATTTCTTCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMHSPQM*GNFFLW Trigger: CCACAGGAAGAAATTTCCTCACATTTGTGGAGAATG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAGCCTCTTTGTTATCTaGGAAAGTCAGGAGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSLFVI*ESQETD Trigger: ATCTGTCTCCTGACTTTCTCAGATAACAAAGAGGCT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGATTTTGTCATTATCTTaGTGCTCCAGAGGCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMILSLS*CSRGIP Trigger: TGGGATGCCTCTGGAGCAGCAAGATAATGACAAAAT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAACATTGATGTGTTCTaGTTTCTTGGTGCAGAACGG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMNIDVF*FLGAER Trigger: CCGTTCTGCACCAAGAAAGCAGAACACATCAATGTT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCTTCATTGCCATTTTTaGTCTCACTCTCTACTGCGT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLHCHF*SHSLLR Trigger: ACGCAGTAGAGAGTGAGACCAAAAATGGCAATGAAG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTCTTCTTCTTCCTTTTaGGAATCACTGGCTGACATA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSSSSF*ESLADI Trigger: TATGTCAGCCAGTGATTCTCAAAAGGAAGAAGAAGA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCTGCTTTTATTTCACTaGCATCCATCTGTTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLLLFH*HPSVAH Trigger: ATGAGCAACAGATGGATGTCAGTGAAATAAAAGCAG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAGCAACAAATATTGCTaGCTGGTACTGTTTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSNKYC*LVLFGF Trigger: GAATCCAAACAGTACCAGTCAGCAATATTTGTTGCT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGACCACCAAAAGGTGGTaGTTCAATAATGTCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMTTKRW*FNNVCS Trigger: TGAACAGACATTATTGAATCACCACCTTTTGGTGGT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCTTATGGTTGCAATGTaGACATTGATGTGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLMVAM*TLMCSA Trigger: AGCAGAACACATCAATGTTCACATTGCAACCATAAG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGATGCTTCTTGAGTTCTaGAGGCCTATGAAATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMMLLEF*RPMKSF Trigger: AAAGGATTTCATAGGCCTTCAGAACTCAAGAAGCAT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGATTCTTTGTGTGAGCTaGGAGAATATGGTGACTAAG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMILCVS*ENMVTK Trigger: CTTAGTCACCATATTCTCTCAGCTCACACAAAGAAT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCAAGTTGGAAGAGTCTaGAGACTTGTACTCACAATA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMQVGRV*RLVLTI Trigger: TATTGTGAGTACAAGTCTGCAGACTCTTCCAACTTG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTTTGAACTCTTATGGTTaGAATGTGAACATTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVLNSYG*NVNIDV Trigger: CACATCAATGTTCACATTGCAACCATAAGAGTTCAA...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGCTGGCAGTGACATTCTaGTCTTCAATTTCATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLAVTF*SSISSE Trigger: TTCTGATGAAATTGAAGACCAGAATGTCACTGCCAG...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTATTCCATCAAAGAATaGCTTTTCTTCTTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMYSIKE*LFFFWG Trigger: ACCCCAGAAGAAGAAAAGTCATTCTTTGATGGAATA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGATCTTGAATTATAACTaGGCCTGGATTATCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMILNYN*AWIIRN Trigger: GTTCCTGATAATCCAGGCTCAGTTATAATTCAAGAT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGAGCTCACACTGTTGTTaGAATTCCTTTTTACATCTC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSSHCC*NSFLHL Trigger: GAGATGTAAAAAGGAATTTCAACAACAGTGTGAGCT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTTTTCCCACAAAACATaGAAGGATAGACACGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMFSHKT*KDRHVK Trigger: CTTTACGTGTCTATCCTTGCATGTTTTGTGGGAAAA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGCCTATGAAATCCTTTaGTGCACATGTCACATTTAT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMAYEIL*CTCHIY Trigger: ATAAATGTGACATGTGCAGCAAAGGATTTCATAGGC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGACAAATATTGCTGACTaGTACTGTTTGGATTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMTNIAD*YCLDSG Trigger: ACCTGAATCCAAACAGTACCAGTCAGCAATATTTGT...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGTGACTAAGCAGAAATaGATCTGGACTATTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMVTKQK*IWTIKV Trigger: GACTTTAATAGTCCAGATCCATTTCTGCTTAGTCAC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTCTCTTACACTTGAATaGAACATTCTTTGTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMSLTLE*NILCVS Trigger: GCTCACACAAAGAATGTTCCATTCAAGTGTAAGAGA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGATAACTTCTGGAGATaGTTCATCCAATTTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMDNFWR*FIQFRR Trigger: TCTTCTAAATTGGATGAAGCATCTCCAGAAGTTATC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGTTGAACTCTTATGGTTaGAATGTGAACATTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMLNSYG*NVNIDV Trigger: CACATCAATGTTCACATTGCAACCATAAGAGTTCAA...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 90 bp | GGTAGGAAAGCTGCTTTTATTTCACTGACATCCATCTGTTGCTCATaGTCAGGAGTATCTGCAGCTGTGCCACCAGCATCTTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GRKAAFISLTSICCS*SGVSAAVPPASSSP Trigger: AGGAGATGAAGATGCTGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGGATGTCAGTGAAATAAAAGCAGCTTTCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 90 bp | GCAATAGGTAGGAAAGCTGCTTTTATTTCACTGACATCCATCTGTTaGTCATGCTCAGGAGTATCTGCAGCTGTGCCACCAGCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AIGRKAAFISLTSIC*SCSGVSAAVPPASS Trigger: TGAAGATGCTGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGGATGTCAGTGAAATAAAAGCAGCTTTCCTACCTATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CAA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTGATTTTGTCATTATCTaGCTGCTCCAGAGGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVDFVII*LLQRHP Trigger: GGGATGCCTCTGGAGCAGCAAGATAATGACAAAATC...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS TCA 90 bp | GATAACTTCTGGAGATGCTTCATCCAATTTAGAAGAATCAGTTCCTaGCTCTGCATTCATGGTAACTTCAGAGGAACCTTCAAGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: DNFWRCFIQFRRISS*LCIHGNFRGTFKIC Trigger: GCAGATCTTGAAGGTTCCTCTGAAGTTACCATGAATGCAGAGTCAGGAACTGATTCTTCTAAATTGGATGAAGCATCTCCAGAAGTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CAA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGATTTTGTCATTATCTaGCTGCTCCAGAGGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMDFVII*LLQRHP Trigger: GGGATGCCTCTGGAGCAGCAAGATAATGACAAAATC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS TCA 90 bp | GTCACTATCCATGTGTACTGCATCAGCTCCTATTCCATCAAAGAATaGCTTTTCTTCTTCTGGGGTCAATTCAATTTCATCTTCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: VTIHVYCISSYSIKE*LFFFWGQFNFIFIH Trigger: ATGGATGAAGATGAAATTGAATTGACCCCAGAAGAAGAAAAGTCATTCTTTGATGGAATAGGAGCTGATGCAGTACACATGGATAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS TCA 90 bp | GCTGTTATAGGATCAGTGATGACTTCTGTTTCTACAAGGCTATCATaGATCACTTGTTCAAAATGTCCTACATCAGACACATGTATAGCT | + |
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Preference number: 5 (lower is better) Translates to: AVIGSVMTSVSTRLS*ITCSKCPTSDTCIA Trigger: AGCTATACATGTGTCTGATGTAGGACATTTTGAACAAGTGATTCATGATAGCCTTGTAGAAACAGAAGTCATCACTGATCCTATAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS-3UTR CAA 90 bp | ACACCTAGGCTTCTGAGGCTAAAAACTCAACATAAAATCAGGGATTGTGTTGTTGCTATCATGAATCACTaGTTCAAAATGTCCTACATC | + |
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Preference number: 5 (lower is better) Translates to: TPRLLRLKTQHKIRDCVVAIMNH*FKMSYI Trigger: GATGTAGGACATTTTGAACAAGTGATTCATGATAGC...AACAACACAATCCCTGATTTTATGTTGAGTTTTTAGCCTCAGAAGCCTAGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189888.7 |
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| CDS-3UTR CAA 90 bp | AGGATGCCTGCTTTTAAAATGAATTTACTGTCTCAATGCCAATATCCCTATATGGCTATCATGAATCACTaGTTCAAAATGTCCTACATC | + |
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Preference number: 5 (lower is better) Translates to: RMPAFKMNLLSQCQYPYMAIMNH*FKMSYI Trigger: GATGTAGGACATTTTGAACAAGTGATTCATGATAGC...CATATAGGGATATTGGCATTGAGACAGTAAATTCATTTTAAAAGCAGGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 72 bp | CCATCTGTTGCTCATGCTCAGGAGTATCTGCAGCTGTaGCACCAGCATCTTCATCTCCTACAATTACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PSVAHAQEYLQL*HQHLHLLQLLQ Trigger: CTGAAGTAATTGTAGGAGATGAAGATGCTGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 72 bp | ACTGACATCCATCTGTTGCTCATGCTCAGGAGTATCTaGAGCTGTGCCACCAGCATCTTCATCTCCTACAAT | + |
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Preference number: 6 (lower is better) Translates to: TDIHLLLMLRSI*SCATSIFISYN Trigger: ATTGTAGGAGATGAAGATGCTGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGGATGTCAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 72 bp | GCTGCTTTTATTTCACTGACATCCATCTGTTGCTCATaGTCAGGAGTATCTGCAGCTGTGCCACCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: AAFISLTSICCS*SGVSAAVPPAS Trigger: AGATGCTGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGGATGTCAGTGAAATAAAAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 72 bp | AGGAAAGCTGCTTTTATTTCACTGACATCCATCTGTTaGTCATGCTCAGGAGTATCTGCAGCTGTGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RKAAFISLTSIC*SCSGVSAAVPP Trigger: TGGTGGCACAGCTGCAGATACTCCTGAGCATGAGCAACAGATGGATGTCAGTGAAATAAAAGCAGCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS GCA 72 bp | AACTCTTATGGTTGCAATGTGAACATTGATGTGTTCTaGTTTCTTGGTGCAGAACGGCATGTTGCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: NSYGCNVNIDVF*FLGAERHVAEP Trigger: AGGCTCAGCAACATGCCGTTCTGCACCAAGAAAGCAGAACACATCAATGTTCACATTGCAACCATAAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS CAA 72 bp | TTAGGGCAGGCCAACTTTATGATGTCGCATTATGTGTaGATTCTTTTCCGAGGGTCTCCGGAATCCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGQANFMMSHYV*ILFRGSPESFL Trigger: AAGAAAGGATTCCGGAGACCCTCGGAAAAGAATCAACACATAATGCGACATCATAAAGTTGGCCTGCCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS TCA 72 bp | GGATCAGTGATGACTTCTGTTTCTACAAGGCTATCATaGATCACTTGTTCAAAATGTCCTACATCAGACACA | + |
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Preference number: 6 (lower is better) Translates to: GSVMTSVSTRLS*ITCSKCPTSDT Trigger: TGTGTCTGATGTAGGACATTTTGAACAAGTGATTCATGATAGCCTTGTAGAAACAGAAGTCATCACTGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS CAA 90 bp | AGGATCAGTGATGACTTCTGTTTCTACAAGGCTATCATGAATCACTaGTTCAAAATGTCCTACATCAGACACATGTATAGCTTCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: RISDDFCFYKAIMNH*FKMSYIRHMYSFTH Trigger: ATGAGTGAAGCTATACATGTGTCTGATGTAGGACATTTTGAACAAGTGATTCATGATAGCCTTGTAGAAACAGAAGTCATCACTGATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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| CDS CAA 72 bp | GATGACTTCTGTTTCTACAAGGCTATCATGAATCACTaGTTCAAAATGTCCTACATCAGACACATGTATAGC | + |
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Preference number: 6 (lower is better) Translates to: DDFCFYKAIMNH*FKMSYIRHMYS Trigger: GCTATACATGTGTCTGATGTAGGACATTTTGAACAAGTGATTCATGATAGCCTTGTAGAAACAGAAGTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065545.6 ENSMUST00000189888.7 |
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