Pregenerated sensors for ZFX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079509Ensembl transcript IDs: ENSMUST00000088102.12, ENSMUST00000113926.8, ENSMUST00000113927.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCTCAACTGGCCGAGTCTAAGTCCTCCTTAGCACCCGTTCACTaGTCCACGGAGCCATCACTCCCTTTCTGTCCCCCTCGCTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: QAQLAESKSSLAPVH*STEPSLPFCPPRLV Trigger: GACCAAGCGAGGGGGACAGAAAGGGAGTGATGGCTCCGTGGACCAGTGAACGGGTGCTAAGGAGGACTTAGACTCGGCCAGTTGAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR TCA 90 bp | GCAGCAAGGCAGCTATCGAGTGGGAAGAAACATCTAAGTCTCCCGTaGTGTGCCAGACCCGTGTGCCAACAGCCAATTCCAGGGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: AARQLSSGKKHLSLP*CARPVCQQPIPGTL Trigger: TAGAGTCCCTGGAATTGGCTGTTGGCACACGGGTCTGGCACATCACGGGAGACTTAGATGTTTCTTCCCACTCGATAGCTGCCTTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR GCA 90 bp | AAGGCAGCTATCGAGTGGGAAGAAACATCTAAGTCTCCCGTGATGTaGCAGACCCGTGTGCCAACAGCCAATTCCAGGGACTCTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: KAAIEWEETSKSPVM*QTRVPTANSRDSRN Trigger: GTTTCTAGAGTCCCTGGAATTGGCTGTTGGCACACGGGTCTGGCACATCACGGGAGACTTAGATGTTTCTTCCCACTCGATAGCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CCA 90 bp | GACAAAGAGAAGGATGGAAGGTCAAAACTAACGGCACGAAAGGGATaGAGCACCATAATGAGGCAGCAAGGCAGCTATCGAGTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: DKEKDGRSKLTARKG*STIMRQQGSYRVGR Trigger: TCTTCCCACTCGATAGCTGCCTTGCTGCCTCATTATGGTGCTCCATCCCTTTCGTGCCGTTAGTTTTGACCTTCCATCCTTCTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CCA 90 bp | AGACTTGGTAAGGATCCAAGTGAGGCCTCAGACTGTTCACACACTTaGACCACACCTCTATCGTGTAATCCAAGACAAGCGAGTGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: RLGKDPSEASDCSHT*TTPLSCNPRQASVK Trigger: CTTAACACTCGCTTGTCTTGGATTACACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTCTGAGGCCTCACTTGGATCCTTACCAAGTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR GCA 90 bp | CAAAAGTGCTGCACATTTCTCAGGATTCCCAACCTTTATCCAACTTaGCATTTTCACTACGACAGTGACCATCCTCCAAGATCTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QKCCTFLRIPNLYPT*HFHYDSDHPPRSES Trigger: AGACTCAGATCTTGGAGGATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGAGAAATGTGCAGCACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CCA 90 bp | ACCTCAAGGTTTAGTTATTTGTCACCTCATCTCTCAGACCAACGCTaGTTTCTAGATTACAGAATCTCATTGTTAATATCAAAAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TSRFSYLSPHLSDQR*FLDYRISLLISKVL Trigger: CAGCACTTTTGATATTAACAATGAGATTCTGTAATCTAGAAACCAGCGTTGGTCTGAGAGATGAGGTGACAAATAACTAAACCTTGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR TCA 90 bp | ATGAGACCTCACCATACAAAATCTCCCATTCCATTAGATGTCTCTTaGCGATTTAATTGTGAGAAATTTGTGAGACAAAAAGTCCACATG | + |
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Preference number: 1 (lower is better) Translates to: MRPHHTKSPIPLDVS*RFNCEKFVRQKVHM Trigger: CATGTGGACTTTTTGTCTCACAAATTTCTCACAATTAAATCGTCAAGAGACATCTAATGGAATGGGAGATTTTGTATGGTGAGGTCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR TCA 90 bp | CAATCACCTCTTAACTTCTCAATGTTACTTGCAAATTCACAGGACTaGAATACCAGTATTTGCATCCAAGTCACAAAATTCAAAGCAACC | + |
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Preference number: 1 (lower is better) Translates to: QSPLNFSMLLANSQD*NTSICIQVTKFKAT Trigger: GGTTGCTTTGAATTTTGTGACTTGGATGCAAATACTGGTATTTCAGTCCTGTGAATTTGCAAGTAACATTGAGAAGTTAAGAGGTGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CAA 90 bp | GTTCACTGGTCCACGGAGCCATCACTCCCTTTCTGTCCCCCTCGCTaGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: VHWSTEPSLPFCPPR*VRQEFPLRLIRENW Trigger: CCAGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGACAGAAAGGGAGTGATGGCTCCGTGGACCAGTGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCTTAGCACCCGTTCACTaGTCCACGGAGCCATCACTC | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTILAPVH*STEPSL Trigger: GAGTGATGGCTCCGTGGACCAGTGAACGGGTGCTAA...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCCAGAGCAGGCTCAACTaGCCGAGTCTAAGTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIQSRLN*PSLSPP Trigger: AGGAGGACTTAGACTCGGCCAGTTGAGCCTGCTCTG...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTGACAAAAAGTCCACATaGATCCTTTCAGTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: VPLAWSDKSSLSGLSERTDKKST*ILSVTN Trigger: ATTGGTAACTGAAAGGATTCATGTGGACTTTTTGTC...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCACGGCACGAAAGGGATaGAGCACCATAATGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTITARKG*STIMRQ Trigger: CTGCCTCATTATGGTGCTCCATCCCTTTCGTGCCGT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCGGCATTGACTGGCATTaGGGATGGACTTCATACCAG | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIGIDWH*GWTSYQ Trigger: CTGGTATGAAGTCCATCCTCAATGCCAGTCAATGCC...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTTAGCACCCGTTCACTaGTCCACGGAGCCATCACTC | + |
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Preference number: 2 (lower is better) Translates to: VCYKLPALKNKTVKDLVRLAPVH*STEPSL Trigger: GAGTGATGGCTCCGTGGACCAGTGAACGGGTGCTAA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCACGGCACGAAAGGGATaGAGCACCATAATGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFTARKG*STIMRQ Trigger: CTGCCTCATTATGGTGCTCCATCCCTTTCGTGCCGT...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAACACAAACCCAGCTACTaGTCTTCTACACAGCGATGC | + |
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Preference number: 2 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKHKPSY*SSTQRC Trigger: GCATCGCTGTGTAGAAGAGCAGTAGCTGGGTTTGTG...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCAAGCTTAGGGAACCCTaGCTTGGCATTGACTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFKLREP*LGIDWH Trigger: ATGCCAGTCAATGCCAAGGCAGGGTTCCCTAAGCTT...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCTGGGGGATTCATGTCTaGATACCCATTAGCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIWGIHV*IPISFS Trigger: TGAAAAGCTAATGGGTATCCAGACATGAATCCCCCA...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCCTTATCAGAGAGAACTaGGGGATTCATGTCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTILIREN*GIHVWI Trigger: TATCCAGACATGAATCCCCCAGTTCTCTCTGATAAG...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAGACTGTTCACACACTTaGACCACACCTCTATCGTGT | + |
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Preference number: 2 (lower is better) Translates to: HAHQRTHQSPLNFSMLLADCSHT*TTPLSC Trigger: ACACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTC...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CAA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTaGGTAAGGATCCAAGTGAGGCCTCAGACTGTTCACACACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VCYKLPALKNKTVKD*VRIQVRPQTVHTLG Trigger: TCCAAGTGTGTGAACAGTCTGAGGCCTCACTTGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGATCTTCTACACAGCGATaGCAGGGACACAAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: WILFKMLTELAFPYTNVRSSTQR*QGHKSS Trigger: TGAACTCTTGTGTCCCTGGCATCGCTGTGTAGAAGA...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCTTCTACACAGCGATaGCAGGGACACAAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFSSTQR*QGHKSS Trigger: TGAACTCTTGTGTCCCTGGCATCGCTGTGTAGAAGA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATCTTCTACACAGCGATaGCAGGGACACAAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKSSTQR*QGHKSS Trigger: TGAACTCTTGTGTCCCTGGCATCGCTGTGTAGAAGA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCACACAAACCCAGCTACTaGTCTTCTACACAGCGATGC | + |
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Preference number: 2 (lower is better) Translates to: LQIASSQKQNCERLGKDPHKPSY*SSTQRC Trigger: GCATCGCTGTGTAGAAGAGCAGTAGCTGGGTTTGTG...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAGCAACCAAGCATTTTaGATTCCACTGCTGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTISNQAF*IPLLHK Trigger: TTTATGCAGCAGTGGAATGCAAAATGCTTGGTTGCT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCGACTGTTCACACACTTaGACCACACCTCTATCGTGT | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFDCSHT*TTPLSC Trigger: ACACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTC...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR CAA 90 bp | CCTCATCTCTCAGACCAACGCTGGTTTCTAGATTACAGAATCTCATaGTTAATATCAAAAGTGCTGCACATTTCTCAGGATTCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: PHLSDQRWFLDYRIS*LISKVLHISQDSQP Trigger: AGGTTGGGAATCCTGAGAAATGTGCAGCACTTTTGATATTAACAATGAGATTCTGTAATCTAGAAACCAGCGTTGGTCTGAGAGATGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCCATGTTACGAGCATaGGACCTCACCATACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFSMLRA*DLTIQN Trigger: ATTTTGTATGGTGAGGTCTCATGCTCGTAACATGGA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAAGCAACCAAGCATTTTaGATTCCACTGCTGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: HAHQRTHQSPLNFSMLLASNQAF*IPLLHK Trigger: TTTATGCAGCAGTGGAATGCAAAATGCTTGGTTGCT...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCCTTCTCAATGTTACTTaGAAATTCACAGGACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTILLNVT*KFTGLK Trigger: TTTCAGTCCTGTGAATTTGCAAGTAACATTGAGAAG...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTGGGGGATTCATGTCTaGATACCCATTAGCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFWGIHV*IPISFS Trigger: TGAAAAGCTAATGGGTATCCAGACATGAATCCCCCA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAAAGGCAGCTATCGAGTaGGAAGAAACATCTAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: WILFKMLTELAFPYTNVRKAAIE*EETSKS Trigger: AGACTTAGATGTTTCTTCCCACTCGATAGCTGCCTT...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAACCCACTTTATGGGTaGGTAATTTATAACAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SGFPTFIQLAIFTTTVTINPLYG*VIYNRN Trigger: ATTCCTGTTATAAATTACCCACCCATAAAGTGGGTT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTCCATGTTACGAGCATaGGACCTCACCATACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VCYKLPALKNKTVKDLVRSMLRA*DLTIQN Trigger: ATTTTGTATGGTGAGGTCTCATGCTCGTAACATGGA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCACTTATCAGAGAGAACTaGGGGATTCATGTCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: LQIASSQKQNCERLGKDPLIREN*GIHVWI Trigger: TATCCAGACATGAATCCCCCAGTTCTCTCTGATAAG...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR TCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAAGACAAAAAGTCCACATaGATCCTTTCAGTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKDKKST*ILSVTN Trigger: ATTGGTAACTGAAAGGATTCATGTGGACTTTTTGTC...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAAACCTTTATCCAACTTaGCATTTTCACTACGACAGT | + |
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Preference number: 2 (lower is better) Translates to: WILFKMLTELAFPYTNVRNLYPT*HFHYDS Trigger: ACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTT...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCACAGTTAAATTTCATTTaGAGCACACAACCATTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAQLNFI*STQPFQ Trigger: TTGGAATGGTTGTGTGCTCCAAATGAAATTTAACTG...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGACAGTTAAATTTCATTTaGAGCACACAACCATTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: WILFKMLTELAFPYTNVRQLNFI*STQPFQ Trigger: TTGGAATGGTTGTGTGCTCCAAATGAAATTTAACTG...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCCAGTTAAATTTCATTTaGAGCACACAACCATTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFQLNFI*STQPFQ Trigger: TTGGAATGGTTGTGTGCTCCAAATGAAATTTAACTG...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CAA 90 bp | CTTCTCAATGTTACTTGCAAATTCACAGGACTGAAATACCAGTATTaGCATCCAAGTCACAAAATTCAAAGCAACCAAGCATTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LLNVTCKFTGLKYQY*HPSHKIQSNQAFCI Trigger: AATGCAAAATGCTTGGTTGCTTTGAATTTTGTGACTTGGATGCAAATACTGGTATTTCAGTCCTGTGAATTTGCAAGTAACATTGAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CCA 72 bp | CTGGCCGAGTCTAAGTCCTCCTTAGCACCCGTTCACTaGTCCACGGAGCCATCACTCCCTTTCTGTCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAESKSSLAPVH*STEPSLPFCPP Trigger: AGGGGGACAGAAAGGGAGTGATGGCTCCGTGGACCAGTGAACGGGTGCTAAGGAGGACTTAGACTCGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CCA 72 bp | AAGGATGGAAGGTCAAAACTAACGGCACGAAAGGGATaGAGCACCATAATGAGGCAGCAAGGCAGCTATCGA | + |
|
Preference number: 3 (lower is better) Translates to: KDGRSKLTARKG*STIMRQQGSYR Trigger: TCGATAGCTGCCTTGCTGCCTCATTATGGTGCTCCATCCCTTTCGTGCCGTTAGTTTTGACCTTCCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CCA 72 bp | CTAAGAGGGCAGGCTACCTTGCTGACAGGCATCATTTaGACATGGATCCTCTTTAAGATGCTGACTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRGQATLLTGII*TWILFKMLTEL Trigger: AAGCTCAGTCAGCATCTTAAAGAGGATCCATGTCCAAATGATGCCTGTCAGCAAGGTAGCCTGCCCTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAACCCTGCCTTGGCATaGACTGGCATTGAGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGFPTFIQLAIFTTTVTINPALA*TGIEDG Trigger: TCCATCCTCAATGCCAGTCAATGCCAAGGCAGGGTT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAGACTGTTCACACACTaGGACCACACCTCTATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIRLFTH*DHTSIV Trigger: CACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTCT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CCA 72 bp | AGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTaGGGGATTCATGTCTGGATACCCATTAGCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RQEFPLRLIREN*GIHVWIPISFS Trigger: TGAAAAGCTAATGGGTATCCAGACATGAATCCCCCAGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCATTCTGTCCCCCTCGCTaGGTCAGACAAGAGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQIASSQKQNCERLGKDPFCPPR*VRQEFP Trigger: AGGGAACTCTTGTCTGACCAAGCGAGGGGGACAGAA...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR GCA 72 bp | AAAATCAGAAAGAAAGGTAAACACAAACCCAGCTACTaGTCTTCTACACAGCGATGCCAGGGACACAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KIRKKGKHKPSY*SSTQRCQGHKS Trigger: ACTCTTGTGTCCCTGGCATCGCTGTGTAGAAGAGCAGTAGCTGGGTTTGTGTTTACCTTTCTTTCTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR GCA 72 bp | TGCACATTTCTCAGGATTCCCAACCTTTATCCAACTTaGCATTTTCACTACGACAGTGACCATCCTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTFLRIPNLYPT*HFHYDSDHPPR Trigger: TCTTGGAGGATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGAGAAATGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR GCA 72 bp | TCTCTTTACTTATCAAGTCTTCCTACGTTTGAGGAATaGAACACTGGGGGCTATGTAAGAGTAGGAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SLYLSSLPTFEE*NTGGYVRVGGT Trigger: TGTCCCTCCTACTCTTACATAGCCCCCAGTGTTGCATTCCTCAAACGTAGGAAGACTTGATAAGTAAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAAGACTGTTCACACACTaGGACCACACCTCTATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: WILFKMLTELAFPYTNVRRLFTH*DHTSIV Trigger: CACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTCT...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAAAACTGTGAAAGACTaGGTAAGGATCCAAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIKTVKD*VRIQVR Trigger: CCTCACTTGGATCCTTACCAAGTCTTTCACAGTTTT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCAAGACTGTTCACACACTaGGACCACACCTCTATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQIASSQKQNCERLGKDPRLFTH*DHTSIV Trigger: CACGATAGAGGTGTGGTCCAAGTGTGTGAACAGTCT...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAAAAACTGTGAAAGACTaGGTAAGGATCCAAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAKTVKD*VRIQVR Trigger: CCTCACTTGGATCCTTACCAAGTCTTTCACAGTTTT...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAAAAAGCAACTAACGTGTaGCTGCTTTTTCCCATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKKATNV*LLFPMY Trigger: ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTT...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCAAAGCAACTAACGTGTaGCTGCTTTTTCCCATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFKATNV*LLFPMY Trigger: ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTT...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCATCAGTTAAATTTCATTaGGAGCACACAACCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HAHQRTHQSPLNFSMLLASVKFH*EHTTIP Trigger: TGGAATGGTTGTGTGCTCCAAATGAAATTTAACTGA...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCAAAAGCAACTAACGTGTaGCTGCTTTTTCCCATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LQIASSQKQNCERLGKDPKATNV*LLFPMY Trigger: ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTT...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGACCTGTATGTTACAAATaGCCAGCTCTCAAAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: WILFKMLTELAFPYTNVRPVCYK*PALKNK Trigger: TTTGTTTTTGAGAGCTGGCAATTTGTAACATACAGG...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCATCAGTTAAATTTCATTaGGAGCACACAACCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQIASSQKQNCERLGKDPSVKFH*EHTTIP Trigger: TGGAATGGTTGTGTGCTCCAAATGAAATTTAACTGA...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CAA 72 bp | TCCACGGAGCCATCACTCCCTTTCTGTCCCCCTCGCTaGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STEPSLPFCPPR*VRQEFPLRLIR Trigger: TCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGACAGAAAGGGAGTGATGGCTCCGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CAA 72 bp | GGCTCACTGGGGACTGGACTAAGAGGGCAGGCTACCTaGCTGACAGGCATCATTTGGACATGGATCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGTGLRGQAT*LTGIIWTWILF Trigger: AAAGAGGATCCATGTCCAAATGATGCCTGTCAGCAAGGTAGCCTGCCCTCTTAGTCCAGTCCCCAGTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTAACAAAGCGCCAGCATaGGAGAAATGCTTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLAWSDKSSLSGLSERTNKAPA*EKCFPH Trigger: GTGCGGAAAGCATTTCTCTCATGCTGGCGCTTTGTT...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCCACTGCGGCTGCGGCTaGAGCTGCAGCATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIHCGCG*SCSILL Trigger: GAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTG...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTTTTTTCTCTTCATCCTaGTGGTTCACAGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLAWSDKSSLSGLSERTFFSSS*WFTGIP Trigger: CGGGATCCCTGTGAACCAGCAGGATGAAGAGAAAAA...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTGATGGCGGAAACCTTTaGCACACTCTACACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VPLAWSDKSSLSGLSERTDGGNL*HTLHKC Trigger: ACATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATC...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTGTTTTGCTCTCTTGGTaGACAAGAGCATGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLAWSDKSSLSGLSERTVLLSW*TRACCC Trigger: GCAACAACATGCTCTTGTCCACCAAGAGAGCAAAAC...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAGGCTGCGGCTGCAGCTaGAGCATCCTCCTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAGCGCS*SILLSN Trigger: GTTGGAGAGGAGGATGCTGCAGCTGCAGCCGCAGCC...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAACACTGCGGCTGCGGCTaGAGCTGCAGCATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKHCGCG*SCSILL Trigger: GAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTG...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGACACTGCGGCTGCGGCTaGAGCTGCAGCATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRHCGCG*SCSILL Trigger: GAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTG...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTTGGGCCAATAATTATTaGTGTTTGGTACTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPLAWSDKSSLSGLSERTWANNY*CLVLPG Trigger: TCCAGGCAGTACCAAACAGCAATAATTATTGGCCCA...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCGGCTGCGGCTGCAGCTaGAGCATCCTCCTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFGCGCS*SILLSN Trigger: GTTGGAGAGGAGGATGCTGCAGCTGCAGCCGCAGCC...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATTGCTGTTCATGCACTaGGGCTGCGGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKLLFMH*GCGCSC Trigger: GCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATTTGCTGTTCATGCACTaGGGCTGCGGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGITLVKATNVLLLFPMYLLFMH*GCGCSC Trigger: GCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAA...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCATTGCTGTTCATGCACTaGGGCTGCGGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQIASSQKQNCERLGKDPLLFMH*GCGCSC Trigger: GCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAA...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGATTCGCATGTGCTTTTTaGGCTCTGACGGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRFACAF*ALTDGG Trigger: TCCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAA...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATTCGCATGTGCTTTTTaGGCTCTGACGGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKFACAF*ALTDGG Trigger: TCCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTTCGCATGTGCTTTTTaGGCTCTGACGGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFFACAF*ALTDGG Trigger: TCCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCATTCTCTTCATCCTGCTaGTTCACAGGGATCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAFSSSC*FTGIPL Trigger: CAACGGGATCCCTGTGAACCAGCAGGATGAAGAGAA...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGATTGAGCTCTGACGGATaGCGGAAACCTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRLSSDG*RKPLPH Trigger: GTGTGGCAAAGGTTTCCGCCATCCGTCAGAGCTCAA...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTCCCGTTGGCATCTATaGCTGCTTCAGAGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRSRWHL*LLQRHS Trigger: ACTGTGCCTCTGAAGCAGTCATAGATGCCAACGGGA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATTCCCGTTGGCATCTATaGCTGCTTCAGAGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGITLVKATNVLLLFPMYSRWHL*LLQRHS Trigger: ACTGTGCCTCTGAAGCAGTCATAGATGCCAACGGGA...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAAAACAAAGCGCCAGCATaGGAGAAATGCTTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKNKAPA*EKCFPH Trigger: GTGCGGAAAGCATTTCTCTCATGCTGGCGCTTTGTT...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCGTGCTTTTTGAGCTCTaGCGGATGGCGGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFVLFEL*RMAETF Trigger: AAAGGTTTCCGCCATCCGTCAGAGCTCAAAAAGCAC...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAGTAAGCAGCTGCCCATaGAATCGGCATGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAVSSCP*NRHEGF Trigger: AAAACCTTCATGCCGATTGCATGGGCAGCTGCTTAC...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTTGAGCTCTGACGGATaGCGGAAACCTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRLSSDG*RKPLPH Trigger: GTGTGGCAAAGGTTTCCGCCATCCGTCAGAGCTCAA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| 3UTR CAA 72 bp | AAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTaGGTAAGGATCCAAGTGAGGCCTCAGACTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLPALKNKTVKD*VRIQVRPQTVH Trigger: GTGAACAGTCTGAGGCCTCACTTGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCACCCATGCAATCGGCATaGAGGTTTTCATTTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAPMQSA*RFSFRC Trigger: ACAACGAAATGAAAACCTTCATGCCGATTGCATGGG...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGAACAAAGCGCCAGCATaGGAGAAATGCTTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRNKAPA*EKCFPH Trigger: GTGCGGAAAGCATTTCTCTCATGCTGGCGCTTTGTT...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGGTGCTTTTTGAGCTCTaGCGGATGGCGGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRVLFEL*RMAETF Trigger: AAAGGTTTCCGCCATCCGTCAGAGCTCAAAAAGCAC...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATTTTTCTCTTCATCCTaGTGGTTCACAGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKFFSSS*WFTGIP Trigger: CGGGATCCCTGTGAACCAGCAGGATGAAGAGAAAAA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCGTAAGCAGCTGCCCATaGAATCGGCATGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFVSSCP*NRHEGF Trigger: AAAACCTTCATGCCGATTGCATGGGCAGCTGCTTAC...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAAACACTGGTGAGTTTTaGTCTCTTGGTGGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLANTGEF*SLGGQE Trigger: CTCTTGTCCACCAAGAGAGCAAAACTCACCAGTGTT...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCATCCTCAATGACATCCTaGATGACAACTGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLASSMTS*MTTESG Trigger: CCCAGATTCAGTTGTCATCCAGGATGTCATTGAGGA...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTTCTCTTCATCCTGCTaGTTCACAGGGATCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRFSSSC*FTGIPL Trigger: CAACGGGATCCCTGTGAACCAGCAGGATGAAGAGAA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAGGAATCCACAACATCTaGCACATAAACCGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAGIHNI*HINRFL Trigger: CAAGAAACGGTTTATGTGTCAGATGTTGTGGATTCC...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAACCCATGCAATCGGCATaGAGGTTTTCATTTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKPMQSA*RFSFRC Trigger: ACAACGAAATGAAAACCTTCATGCCGATTGCATGGG...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGTTTTTCTCTTCATCCTaGTGGTTCACAGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRFFSSS*WFTGIP Trigger: CGGGATCCCTGTGAACCAGCAGGATGAAGAGAAAAA...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGGTAAGCAGCTGCCCATaGAATCGGCATGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRVSSCP*NRHEGF Trigger: AAAACCTTCATGCCGATTGCATGGGCAGCTGCTTAC...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAAAACACTGGTGAGTTTTaGTCTCTTGGTGGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKNTGEF*SLGGQE Trigger: CTCTTGTCCACCAAGAGAGCAAAACTCACCAGTGTT...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCCTCAATGACATCCTaGATGACAACTGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFSSMTS*MTTESG Trigger: CCCAGATTCAGTTGTCATCCAGGATGTCATTGAGGA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAGGAAAATTCTTGCTGTaGACTGCCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRGKFLL*TAKRWR Trigger: TCGCCATCTTTTGGCAGTCCACAGCAAGAATTTTCC...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAGGAATCCACAACATCTaGCACATAAACCGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRGIHNI*HINRFL Trigger: CAAGAAACGGTTTATGTGTCAGATGTTGTGGATTCC...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGCCCATGCAATCGGCATaGAGGTTTTCATTTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRPMQSA*RFSFRC Trigger: ACAACGAAATGAAAACCTTCATGCCGATTGCATGGG...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTGGGCCAATAATTATTaGTGTTTGGTACTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFWANNY*CLVLPG Trigger: TCCAGGCAGTACCAAACAGCAATAATTATTGGCCCA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGGATGGCGGAAACCTTTaGCACACTCTACACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRDGGNL*HTLHKC Trigger: ACATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATC...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCAGATGGCGGAAACCTTTaGCACACTCTACACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQIASSQKQNCERLGKDPDGGNL*HTLHKC Trigger: ACATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATC...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCATCCTCAATGACATCCTaGATGACAACTGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQIASSQKQNCERLGKDPSSMTS*MTTESG Trigger: CCCAGATTCAGTTGTCATCCAGGATGTCATTGAGGA...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCATGATGTCTGTACACTaGACATCTTCTATAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIMMSVH*TSSITT Trigger: TGTTGTTATAGAAGATGTCCAGTGTACAGACATCAT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCAGGAAAATTCTTGCTGTaGACTGCCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQIASSQKQNCERLGKDPGKFLL*TAKRWR Trigger: TCGCCATCTTTTGGCAGTCCACAGCAAGAATTTTCC...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATGGAAAATTCTTGCTGTaGACTGCCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGITLVKATNVLLLFPMYGKFLL*TAKRWR Trigger: TCGCCATCTTTTGGCAGTCCACAGCAAGAATTTTCC...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATGTTTTGCTCTCTTGGTaGACAAGAGCATGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGITLVKATNVLLLFPMYVLLSW*TRACCC Trigger: GCAACAACATGCTCTTGTCCACCAAGAGAGCAAAAC...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGGGAATCCACAACATCTaGCACATAAACCGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCYKLPALKNKTVKDLVRGIHNI*HINRFL Trigger: CAAGAAACGGTTTATGTGTCAGATGTTGTGGATTCC...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAATGATGTCTGTACACTaGACATCTTCTATAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAMMSVH*TSSITT Trigger: TGTTGTTATAGAAGATGTCCAGTGTACAGACATCAT...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCTCTTACACCTAAATaGAAGGTCCTTTGTATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFSLTPK*KVLCMN Trigger: GTTCATACAAAGGACCTTCCATTTAGGTGTAAGAGA...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGATTAAGCTCACTTTGTTaGCGAAATCCTTTTCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: WILFKMLTELAFPYTNVRLSSLC*RNPFLH Trigger: ATGTAGAAAAGGATTTCGGCAACAAAGTGAGCTTAA...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATTAAGCTCACTTTGTTaGCGAAATCCTTTTCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKLSSLC*RNPFLH Trigger: ATGTAGAAAAGGATTTCGGCAACAAAGTGAGCTTAA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCATCTCTTACACCTAAATaGAAGGTCCTTTGTATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQIASSQKQNCERLGKDPSLTPK*KVLCMN Trigger: GTTCATACAAAGGACCTTCCATTTAGGTGTAAGAGA...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS GCA 90 bp | CATGAAGGTTTTCATTTCGTTGTCCTCCACTTGCTGTTCATGCACTaGGGCTGCGGCTGCAGCTGCAGCATCCTCCTCTCCAACAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HEGFHFVVLHLLFMH*GCGCSCSILLSNNH Trigger: GTGATTGTTGGAGAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTGGATGGCGGAAACCTTaGCCACACTCTACACAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VPLAWSDKSSLSGLSERTGWRKP*PHSTQM Trigger: CATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATCC...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCCCTCGCTTGGTCAGACAAGAGTTCCCTCTCCGGCTTATCAGAGAGAACTCACATAAACCGTTTCTaGAACTTCCACAACAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPLAWSDKSSLSGLSERTHINRF*NFHNNL Trigger: CAAATTGTTGTGGAAGTTCAAGAAACGGTTTATGTG...AGTTCTCTCTGATAAGCCGGAGAGGGAACTCTTGTCTGACCAAGCGAGGGGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAATTCGCATGTGCTTTTaGAGCTCTGACGGATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAIRMCF*SSDGWR Trigger: CCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAAT...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | CATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCTCAATGTTACTTGCAGGATGGCGGAAACCTTaGCCACACTCTACACAAATG | + |
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Preference number: 5 (lower is better) Translates to: HAHQRTHQSPLNFSMLLAGWRKP*PHSTQM Trigger: CATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATCC...TGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAATTCGCATGTGCTTTTaGAGCTCTGACGGATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: WILFKMLTELAFPYTNVRIRMCF*SSDGWR Trigger: CCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAAT...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TGGATCCTCTTTAAGATGCTGACTGAGCTTGCATTTCCTTACACAAATGTAAGAGGATGGCGGAAACCTTaGCCACACTCTACACAAATG | + |
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Preference number: 5 (lower is better) Translates to: WILFKMLTELAFPYTNVRGWRKP*PHSTQM Trigger: CATTTGTGTAGAGTGTGGCAAAGGTTTCCGCCATCC...TCTTACATTTGTGTAAGGAAATGCAAGCTCAGTCAGCATCTTAAAGAGGATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCAATTCGCATGTGCTTTTaGAGCTCTGACGGATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LQIASSQKQNCERLGKDPIRMCF*SSDGWR Trigger: CCGCCATCCGTCAGAGCTCAAAAAGCACATGCGAAT...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCAATAATTATTGCTGTTaGGTACTGCCTGGAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: SGFPTFIQLAIFTTTVTINNYCC*VLPGIR Trigger: CCTGATTCCAGGCAGTACCAAACAGCAATAATTATT...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TCAGGATTCCCAACCTTTATCCAACTTGCCATTTTCACTACGACAGTGACCATCTTTAAGCTCACTTTGTaGCCGAAATCCTTTTCTACA | + |
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Preference number: 5 (lower is better) Translates to: SGFPTFIQLAIFTTTVTIFKLTL*PKSFST Trigger: TGTAGAAAAGGATTTCGGCAACAAAGTGAGCTTAAA...GATGGTCACTGTCGTAGTGAAAATGGCAAGTTGGATAAAGGTTGGGAATCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | AATGAATTTCAAGGACATGCTCATCAAAGGACTCACCAATCACCTCTTAACTTCCGCGAATACTATTGTTaGGATCGAGTAGTTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: NEFQGHAHQRTHQSPLNFREYYC*DRVVQL Trigger: GAGTTGAACTACTCGATCCAAACAATAGTATTCGCG...GAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGATCCACGCGAATACTATTGTTaGGATCGAGTAGTTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: LQIASSQKQNCERLGKDPREYYC*DRVVQL Trigger: GAGTTGAACTACTCGATCCAAACAATAGTATTCGCG...TGGATCCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATCGCGAATACTATTGTTaGGATCGAGTAGTTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: SGITLVKATNVLLLFPMYREYYC*DRVVQL Trigger: GAGTTGAACTACTCGATCCAAACAATAGTATTCGCG...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAACACATAAACCGTTTCTaGAACTTCCACAACAATTTG | + |
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Preference number: 5 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKHINRF*NFHNNL Trigger: CAAATTGTTGTGGAAGTTCAAGAAACGGTTTATGTG...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | GTATGTTACAAATTGCCAGCTCTCAAAAACAAAACTGTGAAAGACTTGGTAAGGAATAATTATTGCTGTTaGGTACTGCCTGGAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: VCYKLPALKNKTVKDLVRNNYCC*VLPGIR Trigger: CCTGATTCCAGGCAGTACCAAACAGCAATAATTATT...CCTTACCAAGTCTTTCACAGTTTTGTTTTTGAGAGCTGGCAATTTGTAACATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATAATAATTATTGCTGTTaGGTACTGCCTGGAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: SGITLVKATNVLLLFPMYNNYCC*VLPGIR Trigger: CCTGATTCCAGGCAGTACCAAACAGCAATAATTATT...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TATAAAGTTGCAAAAGATCCTATGAGCCACAAGTTACCCCTAGGAGATTCCAAATTTAAGCTCACTTTGTaGCCGAAATCCTTTTCTACA | + |
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Preference number: 5 (lower is better) Translates to: YKVAKDPMSHKLPLGDSKFKLTL*PKSFST Trigger: TGTAGAAAAGGATTTCGGCAACAAAGTGAGCTTAAA...TTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS-3UTR CAA 90 bp | TCAGGGATTACTTTAGTAAAAGCAACTAACGTGTTGCTGCTTTTTCCCATGTATTTTAAGCTCACTTTGTaGCCGAAATCCTTTTCTACA | + |
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Preference number: 5 (lower is better) Translates to: SGITLVKATNVLLLFPMYFKLTL*PKSFST Trigger: TGTAGAAAAGGATTTCGGCAACAAAGTGAGCTTAAA...ATACATGGGAAAAAGCAGCAACACGTTAGTTGCTTTTACTAAAGTAATCCCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS GCA 72 bp | GTCCTCCACTTGCTGTTCATGCACTGCGGCTGCGGCTaGAGCTGCAGCATCCTCCTCTCCAACAATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: VLHLLFMHCGCG*SCSILLSNNHF Trigger: GAAGTGATTGTTGGAGAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS GCA 72 bp | TTCGTTGTCCTCCACTTGCTGTTCATGCACTGCGGCTaGGGCTGCAGCTGCAGCATCCTCCTCTCCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: FVVLHLLFMHCG*GCSCSILLSNN Trigger: ATTGTTGGAGAGGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS GCA 72 bp | AAGGTTTTCATTTCGTTGTCCTCCACTTGCTGTTCATaGACTGCGGCTGCGGCTGCAGCTGCAGCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KVFISLSSTCCS*TAAAAAAAASS Trigger: GGAGGATGCTGCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS GCA 72 bp | ATCGGCATGAAGGTTTTCATTTCGTTGTCCTCCACTTaGTGTTCATGCACTGCGGCTGCGGCTGCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: IGMKVFISLSST*CSCTAAAAAAA Trigger: TGCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATGCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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| CDS CAA 72 bp | AATCGGCATGAAGGTTTTCATTTCGTTGTCCTCCACTaGCTGTTCATGCACTGCGGCTGCGGCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NRHEGFHFVVLH*LFMHCGCGCSC Trigger: GCAGCTGCAGCCGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATGCCGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088102.12 ENSMUST00000113926.8 ENSMUST00000113927.8 |
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