Pregenerated sensors for ZFR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034949Ensembl transcript IDs: ENSMUST00000117798.8, ENSMUST00000137999.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTACCCCAACTCTGTaGCCCATAGAATCTTCCAGGCCACCCTTCCTGGCATCTCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: WGISFCALCSSTPTL*PIESSRPPFLASRG Trigger: TCCTCGAGATGCCAGGAAGGGTGGCCTGGAAGATTCTATGGGTCACAGAGTTGGGGTAGAGGAGCAGAGAGCACAGAATGAGATTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCACTGCTATCTGGCCTaGGGGTGGTGGGTGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: KDMVGFGPGESHSVLSAPHCYLA*GWWVTA Trigger: GGCTGTCACCCACCACCCCCAGGCCAGATAGCAGTG...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTCTGGCCTGGGGGTGGTaGGTGACAGCCATGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: QLVCSKGICLKDMVGFGPLAWGW*VTAMSM Trigger: CATGCTCATGGCTGTCACCCACCACCCCCAGGCCAG...AGGCCCAAAACCCACCATATCCTTTAAACAGATCCCCTTACTACACACCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR CCA 72 bp | GAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATaGGGCGGAGTCGGCCATCTGCGGAAGGCACTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ELCPRPVVHRVT*GGVGHLRKALS Trigger: ACTGAGTGCCTTCCGCAGATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR GCA 72 bp | TGTAGGTTGGTGGTGATGACTGGCTCAAGGCAGCCCTaGTGTGCCCTGTCGGCCCCGCTTCCTCTCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: CRLVVMTGSRQP*CALSAPLPLPG Trigger: ACCAGGGAGAGGAAGCGGGGCCGACAGGGCACAGCAGGGCTGCCTTGAGCCAGTCATCACCACCAACCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCATAGGATATGGTGGGTTTaGGGCCTGGGGAATCTCATT | + |
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Preference number: 3 (lower is better) Translates to: ELCPRPVVHRVTWGGVGHRIWWV*GLGNLI Trigger: AATGAGATTCCCCAGGCCCAAAACCCACCATATCCT...ATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR CCA 72 bp | AACCAAGGAGATCACTGCTATCTGGCCTGGGGGTGGTaGGTGACAGCCATGAGCATGAGGGTCACCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: NQGDHCYLAWGW*VTAMSMRVTSG Trigger: CCCTGAGGTGACCCTCATGCTCATGGCTGTCACCCACCACCCCCAGGCCAGATAGCAGTGATCTCCTTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| 3UTR CCA 72 bp | ATTCTACAGACTCCAGGCATTGCGCCATGTGTGGGCTaGCCTTTAAAAGCCACAGGTAGAAGGGAACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ILQTPGIAPCVG*PLKATGRREQG Trigger: ACCCTGTTCCCTTCTACCTGTGGCTTTTAAAGGCCAGCCCACACATGGCGCAATGCCTGGAGTCTGTAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| 3UTR CCA 72 bp | GGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTaGGGAATCTCATTCTGTGCTCTCTGCTCCTCTACC | + |
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Preference number: 3 (lower is better) Translates to: GDLFKGYGGFWA*GISFCALCSST Trigger: GGTAGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTTTAAACAGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | ATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCGAGGGCGGAGGACGCTaGGGGCCGGGTGACACTGAG | + |
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Preference number: 4 (lower is better) Translates to: IELCPRPVVHRVTWGGVGEGGGR*GPGDTE Trigger: CTCAGTGTCACCCGGCCCGCAGCGTCCTCCGCCCTC...GCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | GAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCATGCCAGGGTGCCGTGCTaGCTGCTCTCTTCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELCPRPVVHRVTWGGVGHARVPC*LLSSAR Trigger: CCTGGCGGAAGAGAGCAGCCAGCACGGCACCCTGGC...ATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCAGTGGGGACGCCAGGGTaGCGTGCTGGCTGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RAVSTPSGPQGDMGRSRPVGTPG*RAGCSL Trigger: AAGAGAGCAGCCAGCACGGCACCCTGGCGTCCCCAC...TGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | ATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCAGTCCGAGTCAGGGCTaGGGGAGCTTGGTCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IELCPRPVVHRVTWGGVGSPSQG*GSLVLA Trigger: GGCCAGGACCAAGCTCCCGCAGCCCTGACTCGGACT...GCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | GGCCTAATGGATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGTGCTGGACGACGGGTTaGTGCCCTGCGCGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GLMDRAVSTPSGPQGDMGCWTTG*CPARGR Trigger: CCGGCCTCGCGCAGGGCACCAACCCGTCGTCCAGCA...CCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTATCCATTAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCGGGCCAGGGCCAGGCTaGCGGTGCTCTCCATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IELCPRPVVHRVTWGGVGGPGPG*RCSPFW Trigger: CCAAAATGGAGAGCACCGCCAGCCTGGCCCTGGCCC...GCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | AGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCAAGGCTGCTGATCCCTTaGCTGGTGCTGGCCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RAVSTPSGPQGDMGRSRPRLLIP*LVLAGL Trigger: AAGGCCGGCCAGCACCAGCCAAGGGATCAGCAGCCT...TGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | CACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGACAATCACGCACGGCTaGAGGCCGCTGGCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HTRRSQQLEGPHLFRYGRTITHG*RPLARA Trigger: GGCTCGAGCCAGCGGCCTGCAGCCGTGCGTGATTGT...CCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR CCA 90 bp | AGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCACTCTGGGACCTCCACTaGGCTGTGTGCTGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RAVSTPSGPQGDMGRSRPLWDLH*AVCWSS Trigger: AGAGGACCAGCACACAGCCCAGTGGAGGTCCCAGAG...TGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCATCTGGCAGCAGGGAGTGCGTaGGCTTCTTGGAGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCPRPVVHRVTWGGVGHLAAGSA*ASWSRA Trigger: TGCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGC...CAGATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCATCATGAGCTTCATGCTTaGCTGAGGTCTCGGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ELCPRPVVHRVTWGGVGHHELHA*LRSRGC Trigger: GCACCCCCGAGACCTCAGTCAAGCATGAAGCTCATG...ATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | ACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGCTTGGTCCTGGCCTaGAGAGCGACCTGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TRRSQQLEGPHLFRYGRCSLVLA*RATWLA Trigger: GGCCAGCCAGGTCGCTCTGCAGGCCAGGACCAAGCT...ACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGACAATCACGCACGGCTaGAGGCCGCTGGCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GASSWRDHTCSGMGGVGWTITHG*RPLARA Trigger: GGCTCGAGCCAGCGGCCTGCAGCCGTGCGTGATTGT...CCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR CCA 90 bp | AAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCATGTGGGGCCCTGGCTaGCTTGGGGCTGGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KMTEASTPGGASSWRDHTMWGPG*LGAGSS Trigger: GCTGCTCCCAGCCCCAAGCCAGCCAGGGCCCCACAT...GGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAACGGCTGCAGGCCGCTaGCTCGAGCCTGGAACCACT | + |
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Preference number: 4 (lower is better) Translates to: PGGASSWRDHTCSGMGGVTAAGR*LEPGTT Trigger: AGTGGTTCCAGGCTCGAGCCAGCGGCCTGCAGCCGT...TACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR CCA 90 bp | CAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCCACCAGCAGTTCCATaGCCCAGGCAGGCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QNDRGIHTRRSQQLEGPHPPAVP*PRQAGP Trigger: GGGCCCTGCCTGCCTGGGCCATGGAACTGCTGGTGG...GTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR TCA 90 bp | CAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCCGGCCTTGGGTGTGTaGGCTGTGACGGGCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: QNDRGIHTRRSQQLEGPHPALGV*AVTGMS Trigger: GCTCATGCCCGTCACAGCTCACACACCCAAGGCCGG...GTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCACGGCGTCCAGTCAGGTaGATGTCTCTGGCGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TEASTPGGASSWRDHTCSRRPVR*MSLAFR Trigger: CCGGAACGCCAGAGACATGCACCTGACTGGACGCCG...TGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | TGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTACCCCCATGACGGTCGTCGCTaGTCTCCGGCCGACGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: WWVLGLGNLILCSLLLYPHDGRR*SPADAL Trigger: CAGGGCGTCGGCCGGAGAGCAGCGACGACCGTCATG...GGGGTAGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGGCGCACAGGCCACAGTaGAGGCTCTGGGATCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GASSWRDHTCSGMGGVGWAHRPQ*RLWDPL Trigger: CAGAGGATCCCAGAGCCTCCACTGTGGCCTGTGCGC...CCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | ATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCAGTGCGTGGGCTTCTTaGAGCAGAGCAGGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IELCPRPVVHRVTWGGVGSAWAS*SRAGSA Trigger: AGCTGACCCTGCTCTGCTCCAAGAAGCCCACGCACT...GCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | TATGGGAGGTGTAGGTTGGTGGTGATGACTGGCTCAAGGCAGCCCTGCTGTGCCACGGCTGCAGGCCGCTaGCTCGAGCCTGGAACCACT | + |
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Preference number: 4 (lower is better) Translates to: YGRCRLVVMTGSRQPCCATAAGR*LEPGTT Trigger: AGTGGTTCCAGGCTCGAGCCAGCGGCCTGCAGCCGT...GGCACAGCAGGGCTGCCTTGAGCCAGTCATCACCACCAACCTACACCTCCCATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
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| CDS-3UTR TCA 90 bp | GGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGCTCCACCTTGAAGTGTaGTGGCCGCCTGTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GASSWRDHTCSGMGGVGWLHLEV*WPPVSR Trigger: CCTGGAGACAGGCGGCCATCACACTTCAAGGTGGAG...CCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | ATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTGGAAGCCCTGGTAGCTaGTCCTCAACCTGGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: MTEASTPGGASSWRDHTCGSPGS*SSTWGC Trigger: ACAGCCCCAGGTTGAGGAGCAGCTACCAGGGCTTCC...ACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGGTCAGGTCTTCTCGCTaGTGTGGGGTCATGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GASSWRDHTCSGMGGVGWVRSSR*CGVMGS Trigger: GGAGCCCATGACCCCACAGCAGCGAGAAGACCTGAC...CCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTACCCCGGGCCCTGGCTGGCTTaGGGCTGGGAGCAGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: WWVLGLGNLILCSLLLYPGPWLA*GWEQLY Trigger: GTATAGCTGCTCCCAGCCCCAAGCCAGCCAGGGCCC...GGGGTAGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCCCGGGGCTGGCTGCTaGATGTGGGGCCCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KDMVGFGPGESHSVLSAPPGAGC*MWGPGW Trigger: CCAGCCAGGGCCCCACATCCAGCAGCCAGCCCCGGG...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCCTCTACCCCAACTCTGTGACCCATAGAATCTTCCAGGCCACCCTTCCTGCCTGCAGAGCGACCTaGCTGGCCGCTCCCGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLLYPNSVTHRIFQATLPACRAT*LAAPVS Trigger: ACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGC...AGGAAGGGTGGCCTGGAAGATTCTATGGGTCACAGAGTTGGGGTAGAGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGGAGGACAAGGCCCTTaGCCAGAATGCCAACCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TPGGASSWRDHTCSGMGGGGQGP*PECQPA Trigger: TGCGGGTTGGCATTCTGGCCAAGGGCCTTGTCCTCC...ACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTACCCCGCTGCTGTGGGGTCATaGGCTCCAGGGCGTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WWVLGLGNLILCSLLLYPAAVGS*APGRPV Trigger: CACAGGACGCCCTGGAGCCCATGACCCCACAGCAGC...GGGGTAGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR GCA 90 bp | CAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCGGCCATGCATTGTCTaGAGCTCAGGTGGCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QNDRGIHTRRSQQLEGPHRPCIV*SSGGPL Trigger: CAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCG...GTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCCTAATGGATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGCCACAGTGGAGGCTCTaGGATCCTCTGGGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GGLMDRAVSTPSGPQGDMPQWRL*DPLGPP Trigger: TGGAGGTCCCAGAGGATCCCAGAGCCTCCACTGTGG...CATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTATCCATTAGGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGACACAGCTGTCTGGATaGCCTGCAGCTCTTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HTRRSQQLEGPHLFRYGRTQLSG*PAALLP Trigger: CGGAAGAAGAGCTGCAGGCCATCCAGACAGCTGTGT...CCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACTGGAACCACTTAGCATaGCGGAGGGCTGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QNDRGIHTRRSQQLEGPHWNHLA*RRAARV Trigger: GACCCTGGCAGCCCTCCGCCATGCTAAGTGGTTCCA...GTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR GCA 90 bp | TTCAGGTATGGGAGGTGTAGGTTGGTGGTGATGACTGGCTCAAGGCAGCCCTGCGCTCAGGGGCCGGGGTaGAGAGCTCAGAACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FRYGRCRLVVMTGSRQPCAQGPG*RAQNFL Trigger: GAGAAAGTTCTGAGCTCTGCACCCCGGCCCCTGAGC...GCAGGGCTGCCTTGAGCCAGTCATCACCACCAACCTACACCTCCCATACCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
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| CDS-3UTR CCA 90 bp | ATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGGTAGGTGACACTCCGTaGTGTGGGCTCAGAGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: IHTRRSQQLEGPHLFRYGVGDTP*CGLRGN Trigger: ATTCCCTCTGAGCCCACACCACGGAGTGTCACCTAC...CCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | AAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCAGCTGCTCCTCAACCTaGGGCTGTGGAGTCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KMTEASTPGGASSWRDHTSCSST*GCGVSS Trigger: TGAGGAGACTCCACAGCCCCAGGTTGAGGAGCAGCT...GGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCCTCTACCCCAACTCTGTGACCCATAGAATCTTCCAGGCCACCCTTCCTCCATCCCTGGTCTGGTaGTGGGAGCTGGCAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLYPNSVTHRIFQATLPPSLVW*WELAMP Trigger: GGGCATTGCCAGCTCCCACCACCAGACCAGGGATGG...AGGAAGGGTGGCCTGGAAGATTCTATGGGTCACAGAGTTGGGGTAGAGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCTAATGGATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGAGCTGTGTCTGTACCTaGTGCCAGTGCCTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLMDRAVSTPSGPQGDMSCVCT*CQCLCS Trigger: GCTACAGAGGCACTGGCAGCAGGTACAGACACAGCT...CATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTATCCATTAGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTGCTGGCCCCAGTAGCTaGGAGGGGGAAAGCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDMVGFGPGESHSVLSAPAGPSS*EGESGG Trigger: TCCTCCGCTTTCCCCCTCCCAGCTACTGGGGCCAGC...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAACTTGAAGACCTTCTaGTGCCTGGCTCCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TRRSQQLEGPHLFRYGRCNLKTF*CLAPLM Trigger: CATGAGGGGAGCCAGGCACCAGAAGGTCTTCAAGTT...ACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCTCTACCCCAACTCTGTGACCCATAGAATCTTCCAGGCCACCCTTCCTTCCCTGGTCTGGTGGTaGGAGCTGGCAATGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLYPNSVTHRIFQATLPSLVWW*ELAMPM Trigger: CATGGGCATTGCCAGCTCCCACCACCAGACCAGGGA...AGGAAGGGTGGCCTGGAAGATTCTATGGGTCACAGAGTTGGGGTAGAGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR TCA 90 bp | CAAATAGCAATTAAAACCAAGGAGATCACTGCTATCTGGCCTGGGGGTGGTGGGGTGCCCTCCTGGGCCTaGCTAGCCTCCCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIAIKTKEITAIWPGGGGVPSWA*LASLIL Trigger: GAGGATGAGGGAGGCTAGTCAGGCCCAGGAGGGCAC...CCCACCACCCCCAGGCCAGATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGTGGTGATGACTGGCTCTCCTCAGGCTGCCTaGTGTGTTCTTCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGPHLFRYGRCRLVVMTGSPQAA*CVLLAA Trigger: GGCAGCAAGAAGAACACAGCAGGCAGCCTGAGGAGA...GCCAGTCATCACCACCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGGCGTCAGCCCCCGTaGAGGACACGGCGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKPTNKMTEASTPGGARRQPP*RTRRTG Trigger: GCCTGTGCGCCGTGTCCTGCACGGGGGCTGACGCCT...GGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTGCTCAGGGGCCGGGGTaGAGAGCTCAGAACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDMVGFGPGESHSVLSAPAQGPG*RAQNFL Trigger: GAGAAAGTTCTGAGCTCTGCACCCCGGCCCCTGAGC...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTAGACCTTCTGGTGCCTaGCTCCCCTCATGTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDMVGFGPGESHSVLSAPRPSGA*LPSCAQ Trigger: CTGCGCACATGAGGGGAGCCAGGCACCAGAAGGTCT...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTTGGAACCACTTAGCATaGCGGAGGGCTGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDMVGFGPGESHSVLSAPWNHLA*RRAARV Trigger: GACCCTGGCAGCCCTCCGCCATGCTAAGTGGTTCCA...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | CAAATAGCAATTAAAACCAAGGAGATCACTGCTATCTGGCCTGGGGGTGGTGGGGTCTTCTCGCTGCTGTaGGGTCATGGGCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QIAIKTKEITAIWPGGGGVFSLL*GHGLQG Trigger: GCCCTGGAGCCCATGACCCCACAGCAGCGAGAAGAC...CCCACCACCCCCAGGCCAGATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | TTGCACTGTGGGGTGACAGTGTCCTCACAGCTGGTGTGTAGTAAGGGGATCTGTTGTGTCTGTACCTGCTaGCAGTGCCTCTGTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHCGVTVSSQLVCSKGICCVCTC*QCLCSL Trigger: GAGGCTACAGAGGCACTGGCAGCAGGTACAGACACA...ACAGATCCCCTTACTACACACCAGCTGTGAGGACACTGTCACCCCACAGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | CAAATAGCAATTAAAACCAAGGAGATCACTGCTATCTGGCCTGGGGGTGGTGGGTCTCGGGGCAGCTCCTaGTTGATCCTCTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIAIKTKEITAIWPGGGGSRGSS*LILCSR Trigger: CCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCGAGA...CCCACCACCCCCAGGCCAGATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCCTCGTACTTGTCTTCTaGCACTATAGACAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KMTEASTPGGASSWRDHTLVLVF*HYRQLS Trigger: CGAGAGCTGTCTATAGTGGCAGAAGACAAGTACGAG...GGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGTCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCAGGAGGAGCCCCACCAGCAGTTCCATaGCCCAGGCAGGCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKPTNKMTEASTPGGAPPAVP*PRQAGP Trigger: GGGCCCTGCCTGCCTGGGCCATGGAACTGCTGGTGG...GGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGTGGTGATGACTGGCGGTAACTGTTCCATGTaGAGGACCTTGTGTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGPHLFRYGRCRLVVMTGGNCSM*RTLCIC Trigger: GCAGATACACAAGGTCCTTCACATGGAACAGTTACC...GCCAGTCATCACCACCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGTATGGGAGGTGTAGGTTGGTGGTGATGACTGGCTCAAGGCAGCCCTGCGGTAACTGTTCCATGTaGAGGACCTTGTGTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRYGRCRLVVMTGSRQPCGNCSM*RTLCIC Trigger: GCAGATACACAAGGTCCTTCACATGGAACAGTTACC...GCAGGGCTGCCTTGAGCCAGTCATCACCACCAACCTACACCTCCCATACCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTGACAGTGTCCTCACAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGTCAGCTGTACACTGTaGTCCCCACGGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGVTVSSQLVCSKGICLKVSCTL*SPRRTR Trigger: CCTTGTCCTCCGTGGGGACCACAGTGTACAGCTGAC...CTTTAAACAGATCCCCTTACTACACACCAGCTGTGAGGACACTGTCACCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | GGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTCTGCTGTGTTCTTCTTaGTGCCTTAGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYGGFWAWGISFCALCSSLLCSS*CLSSES Trigger: GGACTCTGAGCTAAGGCAGCAAGAAGAACACAGCAG...AGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCAGGAGGAGCCTGGCTGGCTTGGGGCTaGGAGCAGCTATACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKPTNKMTEASTPGGAWLAWG*EQLYPT Trigger: GGTGGGGTATAGCTGCTCCCAGCCCCAAGCCAGCCA...GGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTTGGGCTCAGAGGGAATaGGCTTCCCTAGCCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLVCSKGICLKDMVGFGPWAQRE*ASLAWC Trigger: ACACCAGGCTAGGGAAGCCCATTCCCTCTGAGCCCA...AGGCCCAAAACCCACCATATCCTTTAAACAGATCCCCTTACTACACACCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTAGGCATGCTTACACATaGCATGACGGTCGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVCSKGICLKDMVGFGPRHAYT*HDGRRC Trigger: GCAGCGACGACCGTCATGTCATGTGTAAGCATGCCT...AGGCCCAAAACCCACCATATCCTTTAAACAGATCCCCTTACTACACACCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTGGAGTCTCCTCAGGCTaGCTGCTGTGTTCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVCSKGICLKDMVGFGPGVSSG*LLCSSC Trigger: GCAAGAAGAACACAGCAGGCAGCCTGAGGAGACTCC...AGGCCCAAAACCCACCATATCCTTTAAACAGATCCCCTTACTACACACCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACTGCGTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCACTCTGCAGCAGGGAGTaGGTGGGCTTCTTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHCVVNKPTNKMTEASTPLCSRE*VGFLEQ Trigger: CTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAG...TGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAACGCAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR TCA 90 bp | ATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGATCACTGCTATCGCGGCCCCGCGCAGCTaGCCCTGCAGACCTCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MTLREFQIAIKTKEITAIAAPRS*PCRPRN Trigger: ATTGCGAGGTCTGCAGGGTCAGCTGCGCGGGGCCGC...GATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACTGCGTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCATTGAAGACCTTCTGGTaGCTGGCTCCCCTCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHCVVNKPTNKMTEASTPLKTFW*LAPLMC Trigger: GCACATGAGGGGAGCCAGGCACCAGAAGGTCTTCAA...TGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAACGCAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTGTGTAGTAAGGGGATCTGTTTAAAGGATATGGTGGGTTTTGGGCCTTTCCCTAGCCTGGTGTaGAACTTGAAGACCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVCSKGICLKDMVGFGPFPSLV*NLKTFW Trigger: CCAGAAGGTCTTCAAGTTGCACACCAGGCTAGGGAA...AGGCCCAAAACCCACCATATCCTTTAAACAGATCCCCTTACTACACACCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCCACTGCGTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACATGTACCTGCTGCCAGTaGCTCTGTAGCCTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPHCVVNKPTNKMTEASTCTCCQ*LCSLLA Trigger: GGCCAAGAGGCTACAGAGGCACTGGCAGCAGGTACA...TGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAACGCAGTGGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCCACTGCGTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACATGGCGTTCCGGTCATTaGAGCTGCATTCGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPHCVVNKPTNKMTEASTWRSGH*SCIRRA Trigger: AGCTCTGCGAATGCAGCTTCAATGACCGGAACGCCA...TGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAACGCAGTGGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | ATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGATCACTGCTATCAGGGCTGCGGGAGCTTaGTCCTGGCCTGCAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MTLREFQIAIKTKEITAIRAAGA*SWPAER Trigger: TCGCTCTGCAGGCCAGGACCAAGCTCCCGCAGCCCT...GATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | ATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGATCACTGCTATCTGCAGTGGCCATCCCTaGTCTGGTGGTGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLREFQIAIKTKEITAICSGHP*SGGGSW Trigger: CCAGCTCCCACCACCAGACCAGGGATGGCCACTGCA...GATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR GCA 90 bp | ATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGATCACTGCTATCGCTGTCTGGATGGCCTaGAGCTCTTCTTCCGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLREFQIAIKTKEITAIAVWMA*SSSSVG Trigger: CCCCACGGAAGAAGAGCTGCAGGCCATCCAGACAGC...GATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCAGGAGGAGCCACAATGTTGGCGTCATaGTCAGATGAGACCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKPTNKMTEASTPGGATMLAS*SDETSY Trigger: GTACGAGGTCTCATCTGACCATGACGCCAACATTGT...GGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CCA 90 bp | ATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGATCACTGCTATCGCCTCTGTAGCCTCTTaGCCAGCACCCTCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLREFQIAIKTKEITAIASVAS*PAPSEW Trigger: CCATTCAGAGGGTGCTGGCCAAGAGGCTACAGAGGC...GATAGCAGTGATCTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR TCA 90 bp | TCCCATTCACTTATGACATTAAGGGAGTTTCAAATAGCAATTAAAACCAAGGAGTGCTTACACATGACATaGCGGTCGTCGCTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSLMTLREFQIAIKTKECLHMT*RSSLLS Trigger: GGAGAGCAGCGACGACCGTCATGTCATGTGTAAGCA...CTCCTTGGTTTTAATTGCTATTTGAAACTCCCTTAATGTCATAAGTGAATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS GCA 90 bp | TCCGAGCCCACGGGAGCCGGCGGCGGGGACGGTGCCTGCAGCTTCTaGGGGGCCCGCTGGGAGGAGGGCGGAGGACGCTGCGGGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEPTGAGGGDGACSF*GARWEEGGGRCGPG Trigger: ACCCGGCCCGCAGCGTCCTCCGCCCTCCTCCCAGCGGGCCCCGCAGAAGCTGCAGGCACCGTCCCCGCCGCCGGCTCCCGTGGGCTCGGA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS CCA 90 bp | CCGGCCGACGCCCTGACTGGCGCCGTGCAGTGGCCATCCCTGGTCTaGTGGTGGGAGCTGGCAATGCCCATGCAGGAAGCCCTGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PADALTGAVQWPSLV*WWELAMPMQEALVA Trigger: AGCTACCAGGGCTTCCTGCATGGGCATTGCCAGCTCCCACCACCAGACCAGGGATGGCCACTGCACGGCGCCAGTCAGGGCGTCGGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS TCA 90 bp | CTTACACATGACATGACGGTCGTCGCTGCTCTCCGGCCGACGCCCTaGCTGGCGCCGTGCAGTGGCCATCCCTGGTCTGGTGGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTHDMTVVAALRPTP*LAPCSGHPWSGGGS Trigger: GCTCCCACCACCAGACCAGGGATGGCCACTGCACGGCGCCAGTCAGGGCGTCGGCCGGAGAGCAGCGACGACCGTCATGTCATGTGTAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS CCA 90 bp | CTTGGCCAGAATGCCAACCCGCACCACACCCTTCAGCATCCTCGGTaGTGGGGACGCCAGGGTGCCGTGCTGGCTGCTCTCTTCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGQNANPHHTLQHPR*WGRQGAVLAALFRQ Trigger: CTGGCGGAAGAGAGCAGCCAGCACGGCACCCTGGCGTCCCCACCACCGAGGATGCTGAAGGGTGTGGTGCGGGTTGGCATTCTGGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS CCA 90 bp | CCGGAAGGCCACAAGACGCAGGGCACGCTGTCAGGAGCGCACCTGTaGCCACATACTCCAGGACCCGACGCATGGCATCCCCTGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEGHKTQGTLSGAHL*PHTPGPDAWHPLGS Trigger: TGAGCCCAGGGGATGCCATGCGTCGGGTCCTGGAGTATGTGGCCACAGGTGCGCTCCTGACAGCGTGCCCTGCGTCTTGTGGCCTTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGGGCGGAGTCGGCCATCGGGGCAGCTCCTGCTaGATCCTCTGCAGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELCPRPVVHRVTWGGVGHRGSSC*ILCSRE Trigger: CTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCG...ATGGCCGACTCCGCCCCATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS TCA 90 bp | GGAGCTTGGTCCTGGCCTGCAGAGCGACCTGGCTGGCCGCTCCCGTaGGTCTGTGCGGCTCTTGGTCACCTTCTCTCGGTAGCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GAWSWPAERPGWPLP*VCAALGHLLSVAVT Trigger: GGTCACAGCTACCGAGAGAAGGTGACCAAGAGCCGCACAGACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGCCAGGACCAAGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS GCA 90 bp | GGTCACCTTCTCTCGGTAGCTGTGACCATCCTCCTGGTGGGCGGATaGAGAGGTAGGCACAGGACCCCGGGGCTGGCTGCTGGATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHLLSVAVTILLVGG*RGRHRTPGLAAGCG Trigger: CCCACATCCAGCAGCCAGCCCCGGGGTCCTGTGCCTACCTCTGCATCCGCCCACCAGGAGGATGGTCACAGCTACCGAGAGAAGGTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS CCA 90 bp | CACAAGGGTCCTGTAGCCCCGGGCCATCTGTCAGGAGCGCACCTGTaGCCACATACTCCAGGACCCGACGCATGGCATCCCCTGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HKGPVAPGHLSGAHL*PHTPGPDAWHPLGS Trigger: TGAGCCCAGGGGATGCCATGCGTCGGGTCCTGGAGTATGTGGCCACAGGTGCGCTCCTGACAGATGGCCCGGGGCTACAGGACCCTTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCATCCACACCAGGAGGAGCCAGCAGCTGGAGGGACCACACCTGTTCACAGGGCTGCGGGAGCTaGGTCCTGGCCTGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TEASTPGGASSWRDHTCSQGCGS*VLACRA Trigger: CGCTCTGCAGGCCAGGACCAAGCTCCCGCAGCCCTG...TGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCCTCCTGGTGTGGATGCCTCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 90 bp | CGAAGCTTCCCCAGGGCCTCCCCTGGTGGCCTCCACCTTGAAGTGTaGTGGCCGCCTGTCTCCAGGTCGGCCATGCATTGTCTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSFPRASPGGLHLEV*WPPVSRSAMHCLQL Trigger: GAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATCACACTTCAAGGTGGAGGCCACCAGGGGAGGCCCTGGGGAAGCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | GTCCTGGCCTGCAGAGCGACCTGGCTGGCCGCTCCCGTGAGTCTGTaGGGCTCTTGGTCACCTTCTCTCGGTAGCTGTGACCATCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VLACRATWLAAPVSL*GSWSPSLGSCDHPP Trigger: AGGAGGATGGTCACAGCTACCGAGAGAAGGTGACCAAGAGCCGCACAGACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGCCAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 90 bp | TTGTCTGCAGCTCAGGTGGCCCCTTGCGTGAGGCTGCTGATCCCTTaGCTGGTGCTGGCCGGCCTTGGGTGTGTGAGCTGTGACGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSAAQVAPCVRLLIP*LVLAGLGCVSCDGH Trigger: ATGCCCGTCACAGCTCACACACCCAAGGCCGGCCAGCACCAGCCAAGGGATCAGCAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 90 bp | ACACCCTTCAGCATCCTCGGTGGTGGGGACGCCAGGGTGCCGTGCTaGCTGCTCTCTTCCGCCAGGGTGTCTGACACCAGTCTGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TPFSILGGGDARVPC*LLSSARVSDTSLSA Trigger: AGCACTCAGACTGGTGTCAGACACCCTGGCGGAAGAGAGCAGCCAGCACGGCACCCTGGCGTCCCCACCACCGAGGATGCTGAAGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | CACAGTGGAGGCTCTGGGATCCTCTGGGACCTCCACTGGGCTGTGTaGTGGTCCTCTGAGCCGCCTGCTTCTTCCGGTGCTTCTGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: HSGGSGILWDLHWAV*WSSEPPASSGASAL Trigger: AAGGGCAGAAGCACCGGAAGAAGCAGGCGGCTCAGAGGACCAGCACACAGCCCAGTGGAGGTCCCAGAGGATCCCAGAGCCTCCACTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 90 bp | CACGCTGCGCACTGGCCGTCAGGTCTTCTCGCTGCTGTGGGGTCATaGGCTCCAGGGCGTCCTGTGGACCTTTCTCACAAGGGTCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: HAAHWPSGLLAAVGS*APGRPVDLSHKGPV Trigger: TACAGGACCCTTGTGAGAAAGGTCCACAGGACGCCCTGGAGCCCATGACCCCACAGCAGCGAGAAGACCTGACGGCCAGTGCGCAGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 90 bp | CCTGCAGCTCTTCTTCCGTGGGGTAGATGGAGGCATGCTTACACATaGCATGACGGTCGTCGCTGCTCTCCGGCCGACGCCCTGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: PAALLPWGRWRHAYT*HDGRRCSPADALTG Trigger: GCCAGTCAGGGCGTCGGCCGGAGAGCAGCGACGACCGTCATGTCATGTGTAAGCATGCCTCCATCTACCCCACGGAAGAAGAGCTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 90 bp | CGGGCCCCGGCCCCGAATCTGGTCCGTGGAGGTAACTGTTCCATGTaGAGGACCTTGTGTATCTGCCGGAAGGCCACAAGACGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPAPNLVRGGNCSM*RTLCICRKATRRRA Trigger: TGCCCTGCGTCTTGTGGCCTTCCGGCAGATACACAAGGTCCTTCACATGGAACAGTTACCTCCACGGACCAGATTCGGGGCCGGGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS GCA 90 bp | GCCTCCACCTTGAAGTGTGATGGCCGCCTGTCTCCAGGTCGGCCATaGATTGTCTGCAGCTCAGGTGGCCCCTTGCGTGAGGCTGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: ASTLKCDGRLSPGRP*IVCSSGGPLREAAD Trigger: ATCAGCAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATCACACTTCAAGGTGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CAA 90 bp | GGAGCCAGCAGCTGGAGGGACCACACCTGTTCAGGTATGGGAGGTGTAGGTTGGCAGGTCGGCCATGCATaGTCTGCAGCTCAGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: GASSWRDHTCSGMGGVGWQVGHA*SAAQVA Trigger: GGCCACCTGAGCTGCAGACAATGCATGGCCGACCTG...CCAACCTACACCTCCCATACCTGAACAGGTGTGGTCCCTCCAGCTGCTGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 90 bp | TGCCGTGCTGGCTGCTCTCTTCCGCCAGGGTGTCTGACACCAGTCTaGGTGCTCGTTCTGTGTGGGACACAGCTGTCTGGATGGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRAGCSLPPGCLTPV*VLVLCGTQLSGWPA Trigger: TGCAGGCCATCCAGACAGCTGTGTCCCACACAGAACGAGCACTCAGACTGGTGTCAGACACCCTGGCGGAAGAGAGCAGCCAGCACGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | CTCCGTGGTGTGGGCTCAGAGGGAATGGGCTTCCCTAGCCTGGTGTaGAACTTGAAGACCTTCTGGTGCCTGGCTCCCCTCATGTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRGVGSEGMGFPSLV*NLKTFWCLAPLMCA Trigger: TGCGCACATGAGGGGAGCCAGGCACCAGAAGGTCTTCAAGTTGCACACCAGGCTAGGGAAGCCCATTCCCTCTGAGCCCACACCACGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | TTGAAGTGTGATGGCCGCCTGTCTCCAGGTCGGCCATGCATTGTCTaGAGCTCAGGTGGCCCCTTGCGTGAGGCTGCTGATCCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LKCDGRLSPGRPCIV*SSGGPLREAADPLA Trigger: AGCCAAGGGATCAGCAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATCACACTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | GTAGCTGCTCCTCAACCTGGGGCTGTGGAGTCTCCTCAGGCTGCCTaGTGTGTTCTTCTTGCTGCCTTAGCTCAGAGTCCCAGCGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: VAAPQPGAVESPQAA*CVLLAALAQSPSAV Trigger: CACGGCGCTGGGACTCTGAGCTAAGGCAGCAAGAAGAACACAGCAGGCAGCCTGAGGAGACTCCACAGCCCCAGGTTGAGGAGCAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | TCTGCCACTATAGACAGCTCTCGGGGCAGCTCCTGCTTGATCCTCTaGAGCAGGGAGTGCGTGGGCTTCTTGGAGCAGAGCAGGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SATIDSSRGSSCLIL*SRECVGFLEQSRVS Trigger: GCTGACCCTGCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCGAGAGCTGTCTATAGTGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 90 bp | GCTGGCAATGCCCATGCAGGAAGCCCTGGTAGCTGCTCCTCAACCTaGGGCTGTGGAGTCTCCTCAGGCTGCCTGCTGTGTTCTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AGNAHAGSPGSCSST*GCGVSSGCLLCSSC Trigger: GCAAGAAGAACACAGCAGGCAGCCTGAGGAGACTCCACAGCCCCAGGTTGAGGAGCAGCTACCAGGGCTTCCTGCATGGGCATTGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CAA 90 bp | GGAGGCCTAATGGATAGAGCTGTGTCCACGCCCAGTGGTCCACAGGGTGACATGGAGTGCGTGGGCTTCTaGGAGCAGAGCAGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLMDRAVSTPSGPQGDMECVGF*EQSRVS Trigger: GCTGACCCTGCTCTGCTCCAAGAAGCCCACGCACTC...CATGTCACCCTGTGGACCACTGGGCGTGGACACAGCTCTATCCATTAGGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | TGGGGCTGTGGAGTCTCCTCAGGCTGCCTGCTGTGTTCTTCTTGCTaGCTTAGCTCAGAGTCCCAGCGCCGTGTATCCTCCAGCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WGCGVSSGCLLCSSC*LSSESQRRVSSSCV Trigger: GACACAGCTGGAGGATACACGGCGCTGGGACTCTGAGCTAAGGCAGCAAGAAGAACACAGCAGGCAGCCTGAGGAGACTCCACAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | ACCTGGGGCTGTGGAGTCTCCTCAGGCTGCCTGCTGTGTTCTTCTTaGTGCCTTAGCTCAGAGTCCCAGCGCCGTGTATCCTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TWGCGVSSGCLLCSS*CLSSESQRRVSSSC Trigger: ACAGCTGGAGGATACACGGCGCTGGGACTCTGAGCTAAGGCAGCAAGAAGAACACAGCAGGCAGCCTGAGGAGACTCCACAGCCCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CAA 90 bp | GGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTCGGAGGACAAGGCCCTaGGCCAGAATGCCAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GYGGFWAWGISFCALCSSRRTRP*ARMPTR Trigger: GCGGGTTGGCATTCTGGCCAAGGGCCTTGTCCTCCG...AGAGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | TCGTACTTGTCTTCTGCCACTATAGACAGCTCTCGGGGCAGCTCCTaGTTGATCCTCTGCAGCAGGGAGTGCGTGGGCTTCTTGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SYLSSATIDSSRGSS*LILCSRECVGFLEQ Trigger: CTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCGAGAGCTGTCTATAGTGGCAGAAGACAAGTACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 90 bp | CACCTCTCCCGGTCTAAGACGTCCTCTGGGTCGGACAGAGCGTCTTaGTGTCCTTGTTTTACAGAGGGATCTTCCCGCATCAGAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: HLSRSKTSSGSDRAS*CPCFTEGSSRIRGE Trigger: CTCACCTCTGATGCGGGAAGATCCCTCTGTAAAACAAGGACAGCAAGACGCTCTGTCCGACCCAGAGGACGTCTTAGACCGGGAGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS-3UTR CAA 90 bp | AAGGATATGGTGGGTTTTGGGCCTGGGGAATCTCATTCTGTGCTCTCTGCTCCTCTGGTGGCCTCCACCTaGAAGTGTGATGGCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KDMVGFGPGESHSVLSAPLVAST*KCDGRL Trigger: CAGGCGGCCATCACACTTCAAGGTGGAGGCCACCAG...AGGAGCAGAGAGCACAGAATGAGATTCCCCAGGCCCAAAACCCACCATATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 90 bp | TTCACCCCAGGCTCCACACAGGCTGAGATAACAATGTTGGCGTCATaGTCAGATGAGACCTCGTACTTGTCTTCTGCCACTATAGACAGC | + |
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Preference number: 5 (lower is better) Translates to: FTPGSTQAEITMLAS*SDETSYLSSATIDS Trigger: GCTGTCTATAGTGGCAGAAGACAAGTACGAGGTCTCATCTGACCATGACGCCAACATTGTTATCTCAGCCTGTGTGGAGCCTGGGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS-3UTR CAA 90 bp | GTTGTAAATAAACCTACAAACAAAATGACAGAGGCATCCACACCAGGAGGAGCCAGCCTGGTGTGCAACTaGAAGACCTTCTGGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVNKPTNKMTEASTPGGASLVCN*KTFWCL Trigger: CAGGCACCAGAAGGTCTTCAAGTTGCACACCAGGCT...GGCTCCTCCTGGTGTGGATGCCTCTGTCATTTTGTTTGTAGGTTTATTTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | ACGGGAGCCGGCGGCGGGGACGGTGCCTGCAGCTTCTaGGGGGCCCGCTGGGAGGAGGGCGGAGGACGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGAGGGDGACSF*GARWEEGGGRC Trigger: GCAGCGTCCTCCGCCCTCCTCCCAGCGGGCCCCGCAGAAGCTGCAGGCACCGTCCCCGCCGCCGGCTCCCGT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | TCCGAGCCCACGGGAGCCGGCGGCGGGGACGGTGCCTaGAGCTTCTGCGGGGCCCGCTGGGAGGAGGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: SEPTGAGGGDGA*SFCGARWEEGG Trigger: TCCGCCCTCCTCCCAGCGGGCCCCGCAGAAGCTGCAGGCACCGTCCCCGCCGCCGGCTCCCGTGGGCTCGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | GGCGGGGACGGTGCCTGCAGCTTCTGCGGGGCCCGCTaGGAGGAGGGCGGAGGACGCTGCGGGCCGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGDGACSFCGAR*EEGGGRCGPGD Trigger: GTCACCCGGCCCGCAGCGTCCTCCGCCCTCCTCCCAGCGGGCCCCGCAGAAGCTGCAGGCACCGTCCCCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | GGCTGCGGGAGCTTGGTCCTGGCCTGCAGAGCGACCTaGCTGGCCGCTCCCGTGAGTCTGTGCGGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GCGSLVLACRAT*LAAPVSLCGSW Trigger: CCAAGAGCCGCACAGACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGCCAGGACCAAGCTCCCGCAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | GACATGACGGTCGTCGCTGCTCTCCGGCCGACGCCCTaGCTGGCGCCGTGCAGTGGCCATCCCTGGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DMTVVAALRPTP*LAPCSGHPWSG Trigger: ACCAGACCAGGGATGGCCACTGCACGGCGCCAGTCAGGGCGTCGGCCGGAGAGCAGCGACGACCGTCATGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | AGTCCGAGTCAGGGCTGCGGGAGCTTGGTCCTGGCCTaGAGAGCGACCTGGCTGGCCGCTCCCGTGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPSQGCGSLVLA*RATWLAAPVSL Trigger: CAGACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGCCAGGACCAAGCTCCCGCAGCCCTGACTCGGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | TGCTCTCCGGCCGACGCCCTGACTGGCGCCGTGCAGTaGCCATCCCTGGTCTGGTGGTGGGAGCTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: CSPADALTGAVQ*PSLVWWWELAM Trigger: CATTGCCAGCTCCCACCACCAGACCAGGGATGGCCACTGCACGGCGCCAGTCAGGGCGTCGGCCGGAGAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 72 bp | GGGAAAGCGGAGGACGACTGGGTGCTGGACGACGGGTaGGTGCCCTGCGCGAGGCCGGAAGAGCTGCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKAEDDWVLDDG*VPCARPEELLA Trigger: GGCTAGCAGCTCTTCCGGCCTCGCGCAGGGCACCAACCCGTCGTCCAGCACCCAGTCGTCCTCCGCTTTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | CACCCTTCAGCATCCTCGGTGGTGGGGACGCCAGGGTaGCGTGCTGGCTGCTCTCTTCCGCCAGGGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSASSVVGTPG*RAGCSLPPGCL Trigger: CAGACACCCTGGCGGAAGAGAGCAGCCAGCACGGCACCCTGGCGTCCCCACCACCGAGGATGCTGAAGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | CTCTCGGTAGCTGTGACCATCCTCCTGGTGGGCGGATaGAGAGGTAGGCACAGGACCCCGGGGCTGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVAVTILLVGG*RGRHRTPGLAA Trigger: AGCAGCCAGCCCCGGGGTCCTGTGCCTACCTCTGCATCCGCCCACCAGGAGGATGGTCACAGCTACCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | AGCATCCTCGGTGGTGGGGACGCCAGGGTGCCGTGCTaGCTGCTCTCTTCCGCCAGGGTGTCTGACACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SILGGGDARVPC*LLSSARVSDTS Trigger: ACTGGTGTCAGACACCCTGGCGGAAGAGAGCAGCCAGCACGGCACCCTGGCGTCCCCACCACCGAGGATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | CCTGTAGCCCCGGGCCATCTGTCAGGAGCGCACCTGTaGCCACATACTCCAGGACCCGACGCATGGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PVAPGHLSGAHL*PHTPGPDAWHP Trigger: GGGATGCCATGCGTCGGGTCCTGGAGTATGTGGCCACAGGTGCGCTCCTGACAGATGGCCCGGGGCTACAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | TCCTGGCCTGCAGAGCGACCTGGCTGGCCGCTCCCGTaGGTCTGTGCGGCTCTTGGTCACCTTCTCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SWPAERPGWPLP*VCAALGHLLSV Trigger: TACCGAGAGAAGGTGACCAAGAGCCGCACAGACTCACGGGAGCGGCCAGCCAGGTCGCTCTGCAGGCCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | TGCCAGTGCCTCTGTAGCCTCTTGGCCAGCACCCTCTaGATGGGGCCGCTGGGCCGGGCAGCTACTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CQCLCSLLASTL*MGPLGRAATGS Trigger: ACTTCCAGTAGCTGCCCGGCCCAGCGGCCCCATTCAGAGGGTGCTGGCCAAGAGGCTACAGAGGCACTGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | CACAAGACGCAGGGCACGCTGTCAGGAGCGCACCTGTaGCCACATACTCCAGGACCCGACGCATGGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: HKTQGTLSGAHL*PHTPGPDAWHP Trigger: GGGATGCCATGCGTCGGGTCCTGGAGTATGTGGCCACAGGTGCGCTCCTGACAGCGTGCCCTGCGTCTTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137999.2 |
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| CDS CAA 72 bp | GGTCGGCCATGCATTGTCTGCAGCTCAGGTGGCCCCTaGCGTGAGGCTGCTGATCCCTTGGCTGGTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRPCIVCSSGGP*REAADPLAGAG Trigger: GCCAGCACCAGCCAAGGGATCAGCAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | GATGGCCGCCTGTCTCCAGGTCGGCCATGCATTGTCTaGAGCTCAGGTGGCCCCTTGCGTGAGGCTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGRLSPGRPCIV*SSGGPLREAAD Trigger: ATCAGCAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | GGAGCTGGCAATGCCCATGCAGGAAGCCCTGGTAGCTaGTCCTCAACCTGGGGCTGTGGAGTCTCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGNAHAGSPGS*SSTWGCGVSSG Trigger: GCCTGAGGAGACTCCACAGCCCCAGGTTGAGGAGCAGCTACCAGGGCTTCCTGCATGGGCATTGCCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 72 bp | AGTGTGATGGCCGCCTGTCTCCAGGTCGGCCATGCATaGTCTGCAGCTCAGGTGGCCCCTTGCGTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVMAACLQVGHA*SAAQVAPCVRL Trigger: CAGCCTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATCACACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 90 bp | GGCAGCTCCTGCTTGATCCTCTGCAGCAGGGAGTGCGTGGGCTTCTaGGAGCAGAGCAGGGTCAGCTGTACACTGTGGTCCCCACGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSCLILCSRECVGF*EQSRVSCTLWSPRR Trigger: CCTCCGTGGGGACCACAGTGTACAGCTGACCCTGCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | GGGTGTGTGAGCTGTGACGGGCATGAGCTTCATGCTTaGCTGAGGTCTCGGGGGTGCTGTCCGAACCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GCVSCDGHELHA*LRSRGCCPNLG Trigger: CCCGAGGTTCGGACAGCACCCCCGAGACCTCAGTCAAGCATGAAGCTCATGCCCGTCACAGCTCACACACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | GGTGCCGTGCTGGCTGCTCTCTTCCGCCAGGGTGTCTaGCACCAGTCTGAGTGCTCGTTCTGTGTGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GAVLAALFRQGV*HQSECSFCVGH Trigger: GTGTCCCACACAGAACGAGCACTCAGACTGGTGTCAGACACCCTGGCGGAAGAGAGCAGCCAGCACGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | CAGCGCCGTGTATCCTCCAGCTGTGTCTGTACCTGCTaGCAGTGCCTCTGTAGCCTCTTGGCCAGCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QRRVSSSCVCTC*QCLCSLLASTL Trigger: GAGGGTGCTGGCCAAGAGGCTACAGAGGCACTGGCAGCAGGTACAGACACAGCTGGAGGATACACGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | GCTGTACACTGTGGTCCCCACGGAGGACAAGGCCCTTaGCCAGAATGCCAACCCGCACCACACCCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AVHCGPHGGQGP*PECQPAPHPSA Trigger: TGCTGAAGGGTGTGGTGCGGGTTGGCATTCTGGCCAAGGGCCTTGTCCTCCGTGGGGACCACAGTGTACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | CACTGGCCGTCAGGTCTTCTCGCTGCTGTGGGGTCATaGGCTCCAGGGCGTCCTGTGGACCTTTCTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: HWPSGLLAAVGS*APGRPVDLSHK Trigger: CTTGTGAGAAAGGTCCACAGGACGCCCTGGAGCCCATGACCCCACAGCAGCGAGAAGACCTGACGGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | CTTCTTCCGTGGGGTAGATGGAGGCATGCTTACACATaGCATGACGGTCGTCGCTGCTCTCCGGCCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: LLPWGRWRHAYT*HDGRRCSPADA Trigger: GGCGTCGGCCGGAGAGCAGCGACGACCGTCATGTCATGTGTAAGCATGCCTCCATCTACCCCACGGAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | TTGAAGTGTGATGGCCGCCTGTCTCCAGGTCGGCCATaGATTGTCTGCAGCTCAGGTGGCCCCTTGCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LKCDGRLSPGRP*IVCSSGGPLRE Trigger: CTCACGCAAGGGGCCACCTGAGCTGCAGACAATGCATGGCCGACCTGGAGACAGGCGGCCATCACACTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | ATAGACAGCTCTCGGGGCAGCTCCTGCTTGATCCTCTaGAGCAGGGAGTGCGTGGGCTTCTTGGAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: IDSSRGSSCLIL*SRECVGFLEQS Trigger: GCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCGAGAGCTGTCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS GCA 72 bp | AGCTCCCTCAGAACCCTGATGACAATCACGCACGGCTaGAGGCCGCTGGCTCGAGCCTGGAACCACTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLRTLMTITHG*RPLARAWNHLA Trigger: TGCTAAGTGGTTCCAGGCTCGAGCCAGCGGCCTGCAGCCGTGCGTGATTGTCATCAGGGTTCTGAGGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS TCA 72 bp | CAGAGGGAATGGGCTTCCCTAGCCTGGTGTGCAACTTaGAGACCTTCTGGTGCCTGGCTCCCCTCATGTGCG | + |
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Preference number: 6 (lower is better) Translates to: QREWASLAWCAT*RPSGAWLPSCA Trigger: CGCACATGAGGGGAGCCAGGCACCAGAAGGTCTTCAAGTTGCACACCAGGCTAGGGAAGCCCATTCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | GGCTGCTCTCTTCCGCCAGGGTGTCTGACACCAGTCTaGGTGCTCGTTCTGTGTGGGACACAGCTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GCSLPPGCLTPV*VLVLCGTQLSG Trigger: TCCAGACAGCTGTGTCCCACACAGAACGAGCACTCAGACTGGTGTCAGACACCCTGGCGGAAGAGAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 72 bp | TGCTTGATCCTCTGCAGCAGGGAGTGCGTGGGCTTCTaGGAGCAGAGCAGGGTCAGCTGTACACTGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CLILCSRECVGF*EQSRVSCTLWS Trigger: GGACCACAGTGTACAGCTGACCCTGCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 90 bp | TACTTGTCTTCTGCCACTATAGACAGCTCTCGGGGCAGCTCCTGCTaGATCCTCTGCAGCAGGGAGTGCGTGGGCTTCTTGGAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: YLSSATIDSSRGSSC*ILCSRECVGFLEQS Trigger: GCTCTGCTCCAAGAAGCCCACGCACTCCCTGCTGCAGAGGATCAAGCAGGAGCTGCCCCGAGAGCTGTCTATAGTGGCAGAAGACAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 72 bp | TCAGAGGGAATGGGCTTCCCTAGCCTGGTGTGCAACTaGAAGACCTTCTGGTGCCTGGCTCCCCTCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: SEGMGFPSLVCN*KTFWCLAPLMC Trigger: GCACATGAGGGGAGCCAGGCACCAGAAGGTCTTCAAGTTGCACACCAGGCTAGGGAAGCCCATTCCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS TCA 72 bp | TCCTTGTTTTACAGAGGGATCTTCCCGCATCAGAGGTaGGGTGGCAGACACGGTGACCTTCACCCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLFYRGIFPHQR*GGRHGDLHPRL Trigger: GAGCCTGGGGTGAAGGTCACCGTGTCTGCCACCTCACCTCTGATGCGGGAAGATCCCTCTGTAAAACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS GCA 72 bp | CGGTCTAAGACGTCCTCTGGGTCGGACAGAGCGTCTTaGTGTCCTTGTTTTACAGAGGGATCTTCCCGCATC | + |
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Preference number: 6 (lower is better) Translates to: RSKTSSGSDRAS*CPCFTEGSSRI Trigger: GATGCGGGAAGATCCCTCTGTAAAACAAGGACAGCAAGACGCTCTGTCCGACCCAGAGGACGTCTTAGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117798.8 ENSMUST00000137999.2 |
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| CDS CAA 72 bp | CTGGCGTTCCGGTCATTGAAGCTGCATTCGCAGAGCTaGCATCGGAAGCGGATCACCTTCCCCTCATCACTA | + |
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Preference number: 6 (lower is better) Translates to: LAFRSLKLHSQS*HRKRITFPSSL Trigger: TAGTGATGAGGGGAAGGTGATCCGCTTCCGATGCAAGCTCTGCGAATGCAGCTTCAATGACCGGAACGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 72 bp | ACAATGTTGGCGTCATGGTCAGATGAGACCTCGTACTaGTCTTCTGCCACTATAGACAGCTCTCGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TMLASWSDETSY*SSATIDSSRGS Trigger: GCTGCCCCGAGAGCTGTCTATAGTGGCAGAAGACAAGTACGAGGTCTCATCTGACCATGACGCCAACATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CAA 90 bp | GCTGAGATAACAATGTTGGCGTCATGGTCAGATGAGACCTCGTACTaGTCTTCTGCCACTATAGACAGCTCTCGGGGCAGCTCCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: AEITMLASWSDETSY*SSATIDSSRGSSCL Trigger: CAAGCAGGAGCTGCCCCGAGAGCTGTCTATAGTGGCAGAAGACAAGTACGAGGTCTCATCTGACCATGACGCCAACATTGTTATCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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| CDS CCA 72 bp | GGCTCCACACAGGCTGAGATAACAATGTTGGCGTCATaGTCAGATGAGACCTCGTACTTGTCTTCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: GSTQAEITMLAS*SDETSYLSSAT Trigger: AGTGGCAGAAGACAAGTACGAGGTCTCATCTGACCATGACGCCAACATTGTTATCTCAGCCTGTGTGGAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117798.8 |
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