Pregenerated sensors for ZFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022201Ensembl transcript IDs: ENSMUST00000122941.8, ENSMUST00000128475.9, ENSMUST00000155054.2, ENSMUST00000157034.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACATCACAGTAAGGTGTaGCCTCTCATTACACCACTG | + |
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Preference number: 2 (lower is better) Translates to: MQFYRSASSRSSKSCHHQHHSKV*PLITPL Trigger: CAGTGGTGTAATGAGAGGTCACACCTTACTGTGATG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTGGGTGACAGGATGTaGGGATCATTCAACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLGDRM*GSFNCV Trigger: AACACAGTTGAATGATCCCCACATCCTGTCACCCAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCACGTTGGAACTCGTTaGCAAAGGTCTCGGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYHVGTR*QRSRRI Trigger: TATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000157034.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAACAAAGGAAAACTCCTaGAGTTTCACGTTACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: MQFYRSASSRSSKSCHHQTKENS*SFTLQK Trigger: TTTTTGTAACGTGAAACTGCAGGAGTTTTCCTTTGT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGAAAATCAGACCACGTaGGAACTCGTTGACAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYENQTT*ELVDKG Trigger: ACCTTTGTCAACGAGTTCCAACGTGGTCTGATTTTC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000157034.8 |
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| 3UTR CCA 72 bp | GTTAATAGACCTATAAATGATCTGGGTGACAGGATGTaGGGATCATTCAACTGTGTTAAGACTGTAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VNRPINDLGDRM*GSFNCVKTVEA Trigger: GGCTTCTACAGTCTTAACACAGTTGAATGATCCCCACATCCTGTCACCCAGATCATTTATAGGTCTATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCCTTTTGCCAGCACGCCTACTGCAGGACCCTGCGGCTaGGGAGGCATGCCTGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RLTFLSPRRSNPFASTPTAGPCG*GGMPGR Trigger: CCGACCAGGCATGCCTCCCCAGCCGCAGGGTCCTGC...AGTAGGCGTGCTGGCAAAAGGATTACTTCTCCGAGGAGACAGGAATGTCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
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| CDS-3UTR GCA 90 bp | AGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCCTTTTGCCAGCACGCCTACTGCGGCTGGGGAGGCATaGCTGGTCGGACTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLTFLSPRRSNPFASTPTAAGEA*LVGLPK Trigger: TTTTGGGAGTCCGACCAGGCATGCCTCCCCAGCCGC...AGTAGGCGTGCTGGCAAAAGGATTACTTCTCCGAGGAGACAGGAATGTCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGGCTGCTGGCTATACTaGGCCGCAGCCGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQGCWLY*AAAAAA Trigger: GGCGGCGGCGGCTGCGGCCCAGTATAGCCAGCAGCC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCCTTTTGCCAGCACGCCTACTCTGGGGAGGCATGCCTaGTCGGACTCCCAAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: RLTFLSPRRSNPFASTPTLGRHA*SDSQKT Trigger: GGTCTTTTGGGAGTCCGACCAGGCATGCCTCCCCAG...AGTAGGCGTGCTGGCAAAAGGATTACTTCTCCGAGGAGACAGGAATGTCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGCAGGACCCTGCGGCTaGGGAGGCATGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYAGPCG*GGMPGR Trigger: CCGACCAGGCATGCCTCCCCAGCCGCAGGGTCCTGC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACCGCCCCGCTGTGGGTaGATCCAAAGTAGTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQPPRCG*IQSSCR Trigger: CCGGCAACTACTTTGGATTCACCCACAGCGGGGCGG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAGCAGGCCTGGCAACTaGAACTGTGGCGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYSRPGN*NCGGCW Trigger: CCAGCAGCCGCCACAGTTGCAGTTGCCAGGCCTGCT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGCGGCTGGGGAGGCATaGCTGGTCGGACTCCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYAAGEA*LVGLPK Trigger: TTTTGGGAGTCCGACCAGGCATGCCTCCCCAGCCGC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGCCGGTCGCCATTTTaGCATCTTCCCCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYCRSPF*HLPPAG Trigger: GCCGGCTGGGGGAAGATGCCAAAATGGCGACCGGCA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGGCTACACCCGAAGCTaGCTGCTGGCTATACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQGYTRS*LLAILG Trigger: GCCCAGTATAGCCAGCAGCCAGCTTCGGGTGTAGCC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACAACTGGAGCAGGCCTaGCAACTGCAACTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQQLEQA*QLQLWR Trigger: CCGCCACAGTTGCAGTTGCCAGGCCTGCTCCAGTTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACAAGGGACGCAGGTGTaGCTGGTTCTGACCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQQGTQV*LVLTLH Trigger: ATGCAGGGTCAGAACCAGTCACACCTGCGTCCCTTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATACACCCGAAGCTGGCTaGTGGCTATACTGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYTPEAG*WLYWAA Trigger: TGCGGCCCAGTATAGCCAGCAGCCAGCTTCGGGTGT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGGGGTAGCCTCCATATaGAGCAGCTGTTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQGVASI*SSCCSS Trigger: GCTGCTGCAACAGCTGCTGCATATGGAGGCTACCCC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGCTGCAGCAGCAGCTaGTGCTGCTGCTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQCCSSS*CCCLLL Trigger: CAGAAGCAAGCAGCAGCAGCAGCTGCTGCTGCAGCA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCTGGGGAGGCATGCCTaGTCGGACTCCCAAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLGRHA*SDSQKT Trigger: GGTCTTTTGGGAGTCCGACCAGGCATGCCTCCCCAG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGCAACTGTGGCGGCTaGTGGTGCGTAAGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYCNCGG*WCVSSS Trigger: ACTGCTGCTTACGCACCAGCAGCCGCCACAGTTGCA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACACAGTAGCTGCAGCTaGCACCGGTTGTACAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQHSSCS*HRLYSG Trigger: TCCACTGTACAACCGGTGGCAGCTGCAGCTACTGTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGCAGCAGCAGCTGCTaGTGCTGCTTGCTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQCSSSC*CCLLLL Trigger: CAACAGAAGCAAGCAGCAGCAGCAGCTGCTGCTGCA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GCTAGGAAAATCAGACCACGTTGGAACTCGTTGACAAAGGTCTCGGAGAATACGAGGGTGATAGTGACTTaGATTTTGGGCTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: ARKIRPRWNSLTKVSENTRVIVT*ILGSTH Trigger: GTGTGTGGAGCCCAAAATGCAAGTCACTATCACCCT...CGTATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTGGTCTGATTTTCCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157034.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAACTGTGGCGGCTGCTaGTGCGTAAGCAGCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQNCGGC*CVSSSN Trigger: GTTACTGCTGCTTACGCACCAGCAGCCGCCACAGTT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGTAGTAGCTGGGGGTaGTGGTGGTGGTGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQCSSWG*WWWCFL Trigger: CAAGAAGCACCACCACCACCACCCCCAGCTACTACA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGTTCTGTGTAGTAGCTaGGGGTGGTGGTGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYVLCSS*GWWWWC Trigger: GCACCACCACCACCACCCCCAGCTACTACACAGAAC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGGAACCACTTAGCGTaGCGTAGAGCAGCCAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYWNHLA*RRAARA Trigger: CGCTCTGGCTGCTCTACGCCACGCTAAGTGGTTCCA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGTGGCGGCTGCTGGTaGGTAAGCAGCAGTAACTGT | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYCGGCW*VSSSNC Trigger: ACAGTTACTGCTGCTTACGCACCAGCAGCCGCCACA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAGCTGTTGCAGCAGCTaGAACAGCAACTGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYSCCSS*NSNWSR Trigger: CCTGCTCCAGTTGCTGTTGCAGCTGCTGCAACAGCT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAGCAGCAGCTGCTGCTaGTGCTTGCTTCTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQSSSCC*CLLLLL Trigger: CAACAACAGAAGCAAGCAGCAGCAGCAGCTGCTGCT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAGCTCGCAACGTAGCTaGTTTTGTGTCCCACGAGTT | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQSSQRS*FCVPRV Trigger: AACTCGTGGGACACAAAATCAGCTACGTTGCGAGCT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGCTTGCGCCAATACTTaGAGGAGAGGCAGTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQACANT*RRGSWF Trigger: AAACCAACTGCCTCTCCTTCAAGTATTGGCGCAAGC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAGGTGTGACTGGTTCTaGCCCTGCATCTTGCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQRCDWF*PCILLY Trigger: GTAAAGCAAGATGCAGGGTCAGAACCAGTCACACCT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTGCGATCATCCCAATaGTGCTGCTCTTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLRSSQ*CCSSSI Trigger: AATGGAGGAAGAGCAGCATCATTGGGATGATCGCAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTGAGCACAGCAAAACAAGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCTGCGATCATCCCAATaGTGCTGCTCTTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: FSEHSKTRLTFLSPRRSNLRSSQ*CCSSSI Trigger: AATGGAGGAAGAGCAGCATCATTGGGATGATCGCAG...ATTACTTCTCCGAGGAGACAGGAATGTCAACCTTGTTTTGCTGTGCTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
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| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAGCAGCTGCTGCTGCTaGTTGCTTCTGTTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYSSCCC*LLLLLL Trigger: CAGCAACAACAGAAGCAAGCAGCAGCAGCAGCTGCT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAGTGGTAGCTGGACTTaGTGTGGCTGGTTTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQSGSWT*CGWFYG Trigger: GCCATAAAACCAGCCACACCAAGTCCAGCTACCACT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACCACCGGTTGTACAGTaGAGGACACAGGATAAATGG | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQPPVVQ*RTQDKW Trigger: CCATTTATCCTGTGTCCTCCACTGTACAACCGGTGG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCCATTAGCTCTAGCCTaGAACCACTTAGCGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYPLALA*NHLAWR Trigger: ACGCCACGCTAAGTGGTTCCAGGCTAGAGCTAATGG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACACGTTGGAACTCGTTaGCAAAGGTCTCGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQHVGTR*QRSRRI Trigger: TATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTGAGCACAGCAAAACAAGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCATCAGGCATTCGTCTaGGATCATCCCAATGATGCT | + |
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Preference number: 4 (lower is better) Translates to: FSEHSKTRLTFLSPRRSNHQAFV*DHPNDA Trigger: AGCATCATTGGGATGATCGCAGACGAATGCCTGATG...ATTACTTCTCCGAGGAGACAGGAATGTCAACCTTGTTTTGCTGTGCTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
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| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAGGGTGATAGTGACTTaGATTTTGGGCTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQRVIVT*ILGSTH Trigger: GTGTGTGGAGCCCAAAATGCAAGTCACTATCACCCT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGAAAGTAGTGGTAGCTaGACTTGGTGTGGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQESSGS*TWCGWF Trigger: AAACCAGCCACACCAAGTCCAGCTACCACTACTTTC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATTAGCACCACGAATGTaGGCAGCATATGCATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLAPRM*AAYASA Trigger: AGCAGATGCATATGCTGCCCACATTCGTGGTGCTAA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGGAAAATCAGACCACGTTGGAACTCGTTGACAAAGGTCTCGGAGAATACGCTCTTCTCGAATAATTaGAGATGTCAGGGTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARKIRPRWNSLTKVSENTLFSNN*RCQGDS Trigger: ACTATCACCCTGACATCTCCAATTATTCGAGAAGAG...CGTATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTGGTCTGATTTTCCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157034.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGTGGTCCAGCACAGCTaGTCTTACAAACATCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQVVQHS*SYKHHN Trigger: ATTGTGATGTTTGTAAGATCAGCTGTGCTGGACCAC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATACAGCAAAACAAGGTTaGCATTCCTGTCTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYTAKQG*HSCLLG Trigger: TCCGAGGAGACAGGAATGTCAACCTTGTTTTGCTGT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGGCAGCATATGCATCTaGTCCTGTACAAGACACATC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYGSICI*SCTRHI Trigger: GATGTGTCTTGTACAGGAGCAGATGCATATGCTGCC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAATGTGGGCAGCATATaGATCTGCTCCTGTACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQNVGSI*ICSCTR Trigger: TCTTGTACAGGAGCAGATGCATATGCTGCCCACATT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTTCGTCCTTTTAGGTaGATCTCTTTAGCATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLRPFR*ISLALG Trigger: CCCCAATGCTAAAGAGATGCACCTAAAAGGACGAAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCATCAGGCATTCGTCTaGGATCATCCCAATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYHQAFV*DHPNDA Trigger: AGCATCATTGGGATGATCGCAGACGAATGCCTGATG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAGCAGCAGTTGCTGTTaGCTGTTGGTAGTACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYSSSCC*LLVVLL Trigger: AAGCAGTACTACCAACAGCCAACAGCAACTGCTGCT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTGACATTCCTGTCTCCTCGGAGAAGTAATCCTTTTGCCAGCACGCCTACTATAGAAACAATTTTCTaGACGGCTTGTAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTFLSPRRSNPFASTPTIETIF*TACNSS Trigger: AGAAGAGTTACAAGCCGTCCAGAAAATTGTTTCTAT...AGTAGGCGTGCTGGCAAAAGGATTACTTCTCCGAGGAGACAGGAATGTCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155054.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAATTGGTAGGTATCGCTaGCACTTTAGTGTTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQIGRYR*HFSVGC Trigger: ACATCCAACACTAAAGTGTCAGCGATACCTACCAAT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATTGAGTATACTGTGTTaGACCTTGGCTATAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLSILC*TLAITC Trigger: GCAGGTTATAGCCAAGGTGCAACACAGTATACTCAA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCACGAGTTGAGTTGTTaGTGCTGCTGGTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYHELSC*CCWYFE Trigger: CTCAAAATACCAGCAGCAGCAACAACTCAACTCGTG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATATCTTGCTTTACTTCTaGAATCTGCACAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYILLYF*NLHSRG Trigger: GCCTCTGCTGTGCAGATTCCAGAAGTAAAGCAAGAT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATCTTACATACGAATATaGGTCCTGGTAGTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQSYIRI*VLVVLC Trigger: ACACAGAACTACCAGGACTCATATTCGTATGTAAGA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAATTTAACCACTTTCTaGTGCTTAGCACCACGAATG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQNLTTF*CLAPRM Trigger: CATTCGTGGTGCTAAGCATCAGAAAGTGGTTAAATT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAAACATTTGGTTCCGTTaGAGGAATAGGTTTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQNIWFR*RNRFTK Trigger: CTTGGTAAACCTATTCCTTCAACGGAACCAAATGTT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAACCAGAATAAGTAACTaGTGTGGTACTGTAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQTRISN*CGTVSS Trigger: GCTACTTACAGTACCACAGCAGTTACTTATTCTGGT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTTGAGTTGTTGCTGCTaGTGGTATTTTGAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLSCCC*WYFERL Trigger: AAGCCTCTCAAAATACCAGCAGCAGCAACAACTCAA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCTCTTTATAAGTCTGTaGTCCAGCACAGCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLFISL*SSTADL Trigger: AAGATCAGCTGTGCTGGACCACAGACTTATAAAGAG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAGTTGTTGCTGCTGCTaGTATTTTGAGAGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYSCCCC*YFERLS Trigger: TGAAAGCCTCTCAAAATACCAGCAGCAGCAACAACT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATATAATCATGTCCCACTaGTTGTACATCACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYIIMSH*LYITLQ Trigger: CTGCAGAGTGATGTACAACCAGTGGGACATGATTAT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTTCTTGAATTTTTCTaGCACGAATACTGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLLEFF*HEYWAS Trigger: TGAAGCCCAGTATTCGTGCCAGAAAAATTCAAGAAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTCTTCTCGAATAATTaGAGATGTCAGGGTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLFSNN*RCQGDS Trigger: ACTATCACCCTGACATCTCCAATTATTCGAGAAGAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATAAAATCAGACCACGTTaGAACTCGTTGACAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYKIRPR*NSLTKV Trigger: GACCTTTGTCAACGAGTTCCAACGTGGTCTGATTTT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGGCTTCACTTCTACTTaGAAATCTGGATTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQGFTST*KSGFTF Trigger: AAAAGTAAATCCAGATTTGCAAGTAGAAGTGAAGCC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACAATATTCCTCCTTCTaGATTTGCTTTCTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQFYRSASSRSSKSCHHQQYSSF*ICFLIF Trigger: GAAAATGAGAAAGCAAATGCAGAAGGAGGAATATTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATATAGAAACAATTTTCTaGACGGCTTGTAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYIETIF*TACNSS Trigger: AGAAGAGTTACAAGCCGTCCAGAAAATTGTTTCTAT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS TCA 90 bp | CCACTGGTTGTACATCACTCTGCAGAGCAGCAAGGGACGCAGGTGTaGCTGGTTCTGACCCTGCATCTTGCTTTACTTCTGGAATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLVVHHSAEQQGTQV*LVLTLHLALLLESA Trigger: TGCAGATTCCAGAAGTAAAGCAAGATGCAGGGTCAGAACCAGTCACACCTGCGTCCCTTGCTGCTCTGCAGAGTGATGTACAACCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTTGCCGGTCGCCATTTaGGCATCTTCCCCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLPVAI*ASSPSR Trigger: CCGGCTGGGGGAAGATGCCAAAATGGCGACCGGCAA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGCAGCTGCCACCGGTaGTACAGTGGAGGACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYCSCHR*YSGGHR Trigger: CCTGTGTCCTCCACTGTACAACCGGTGGCAGCTGCA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGGAAAATCAGACCACGTTGGAACTCGTTGACAAAGGTCTCGGAGAATACGCAGGGTGATAGTGACTaGCATTTTGGGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: ARKIRPRWNSLTKVSENTQGDSD*HFGLHT Trigger: TGTGTGGAGCCCAAAATGCAAGTCACTATCACCCTG...CGTATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTGGTCTGATTTTCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157034.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATTTTATGGCTGTCACTaGCCGAGCTTGCTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQFYGCH*PSLLRL Trigger: CAAGCGCAGCAAGCTCGGCAAGTGACAGCCATAAAA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGGAGAAGTAATCCTTTaGCCAGCACGCCTACTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQGEVIL*PARLLA Trigger: TGCGAGTAGGCGTGCTGGCAAAAGGATTACTTCTCC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGGTGGTGCTTCTTGTaGCCTCTGGGTGTAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQWWCFL*PLGVTI Trigger: TATGGTTACACCCAGAGGCAACAAGAAGCACCACCA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCTACAGCAGCAGCAGTaGCTGTTGGCTGTTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLQQQQ*LLAVGS Trigger: ACTACCAACAGCCAACAGCAACTGCTGCTGCTGTAG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAGTCCCACGAGTTGAGTaGTTGCTGCTGCTGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQVPRVE*LLLLVF Trigger: AAATACCAGCAGCAGCAACAACTCAACTCGTGGGAC...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAAATCATGTCCCACTGGTaGTACATCACTCTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQIMSHW*YITLQS Trigger: GCTCTGCAGAGTGATGTACAACCAGTGGGACATGAT...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACACAGCAAAACAAGGTaGACATTCCTGTCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQHSKTR*TFLSPR Trigger: CCGAGGAGACAGGAATGTCAACCTTGTTTTGCTGTG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACCACGTTGGAACTCGTaGACAAAGGTCTCGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQPRWNS*TKVSEN Trigger: ATTCTCCGAGACCTTTGTCAACGAGTTCCAACGTGG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGCTTGCTTCTGTTGTaGCTGCTGCTGTTGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQCLLLL*LLLLVV Trigger: TACTACCAACAGCAGCAGCAACAACAGAAGCAAGCA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTGCTTGCGCCAATACTaGAAGGAGAGGCAGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYCLRQY*KERQLV Trigger: AACCAACTGCCTCTCCTTCAAGTATTGGCGCAAGCA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCAGGGTGATAGTGACTaGCATTTTGGGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYQGDSD*HFGLHT Trigger: TGTGTGGAGCCCAAAATGCAAGTCACTATCACCCTG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000157034.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATTTCTTGGCAGCCATATaGGTAGGTATCGCTGACACT | + |
|
Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYFLAAI*VGIADT Trigger: AGTGTCAGCGATACCTACCAATATGGCTGCCAAGAA...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATATAGTGACTTGCATTTaGGGCTCCACACACGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYIVTCI*GSTHEF Trigger: GAACTCGTGTGTGGAGCCCAAAATGCAAGTCACTAT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000157034.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATATACTGTGTTGCACCTaGGCTATAACCTGCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYILCCT*AITCFR Trigger: CCTAAAGCAGGTTATAGCCAAGGTGCAACACAGTAT...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATCTTGAGTATACTGTGTaGCACCTTGGCTATAACCTG | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYLEYTV*HLGYNL Trigger: CAGGTTATAGCCAAGGTGCAACACAGTATACTCAAG...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACTGAAGAAGTTGCAATaGATGACGTGTTCAGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQLKKLQ*MTCSEY Trigger: GTACTCTGAACACGTCATCAATTGCAACTTCTTCAG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGGTGTAGATGTTTTCTaGGCAGCCATATTGGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYGVDVF*AAILVG Trigger: ACCTACCAATATGGCTGCCAAGAAAACATCTACACC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAATGCATCTCTTTAGCATaGGGGTCATTAAAGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQCISLA*GSLKLH Trigger: ATGCAGCTTTAATGACCCCAATGCTAAAGAGATGCA...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGTGTTCAGAGTACAATaGCTTGCGCCAATACTTGAA | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYVFRVQ*LAPILE Trigger: TTCAAGTATTGGCGCAAGCAATTGTACTCTGAACAC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGTTTTACCGAAGCGCAAGTAGCAGATCAAGCAAAAGTTGTCACCATCAACCGTTTTATTTCCTGTaGACTGTAGCTTATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: MQFYRSASSRSSKSCHHQPFYFL*TVAYFH Trigger: GTGGAAATAAGCTACAGTCAACAGGAAATAAAACGG...TTGATGGTGACAACTTTTGCTTGATCTGCTACTTGCGCTTCGGTAAAACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGGGCTTCACTTCTACTaGCAAATCTGGATTTACTTT | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYGLHFY*QIWIYF Trigger: AAAGTAAATCCAGATTTGCAAGTAGAAGTGAAGCCC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAAGACCAATATATTCCCCCTAGTCAAATCTCTTTCTTTCCATCCATATGGCTTAATAACGACTTaGAAGGTTTTTCTGAGCACA | + |
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Preference number: 5 (lower is better) Translates to: GGKTNIFPLVKSLSFHPYGLITT*KVFLST Trigger: TGTGCTCAGAAAAACCTTCAAAGTCGTTATTAAGCC...ATATGGATGGAAAGAAAGAGATTTGACTAGGGGGAATATATTGGTCTTTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS CCA 90 bp | TCTTTAGCATTGGGGTCATTAAAGCTGCATTCACATAATTTACAATaGAAGCGAATGACTTTTCCTTCATCATTTCGTACCTCTTCAACA | + |
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Preference number: 5 (lower is better) Translates to: SLALGSLKLHSHNLQ*KRMTFPSSFRTSST Trigger: TGTTGAAGAGGTACGAAATGATGAAGGAAAAGTCATTCGCTTCCATTGTAAATTATGTGAATGCAGCTTTAATGACCCCAATGCTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS TCA 72 bp | GGGCCGCAGCCGCCGCCGCCGCCGCCCCGCTGTGGGTaGATCCAAAGTAGTTGCCGGTCGCCATTTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GPQPPPPPPRCG*IQSSCRSPFWH Trigger: ATGCCAAAATGGCGACCGGCAACTACTTTGGATTCACCCACAGCGGGGCGGCGGCGGCGGCGGCTGCGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000128475.9 |
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| CDS GCA 72 bp | AGCAGCTGCAACAGCAACTGGAGCAGGCCTGGCAACTaGAACTGTGGCGGCTGCTGGTGCGTAAGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSCNSNWSRPGN*NCGGCWCVSSS Trigger: ACTGCTGCTTACGCACCAGCAGCCGCCACAGTTGCAGTTGCCAGGCCTGCTCCAGTTGCTGTTGCAGCTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000128475.9 |
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| CDS GCA 72 bp | GTGTGCAGTGGGGTAGCCTCCATATGCAGCAGCTGTTaGAGCAGCTGCAACAGCAACTGGAGCAGGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VCSGVASICSSC*SSCNSNWSRPG Trigger: GCCAGGCCTGCTCCAGTTGCTGTTGCAGCTGCTGCAACAGCTGCTGCATATGGAGGCTACCCCACTGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000128475.9 |
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| CDS GCA 72 bp | AGTAAAGGTGGTCCCTGTCCAGGCAGCTGTTGCTGCTaGAGCAGCAGCTGCTGCTGCTGCTTGCTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKGGPCPGSCCC*SSSCCCCLLLL Trigger: CAACAGAAGCAAGCAGCAGCAGCAGCTGCTGCTGCAGCAGCAACAGCTGCCTGGACAGGGACCACCTTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000128475.9 |
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| CDS CAA 72 bp | TGCTGCAGCAGCAGCTGCTGCTGCTGCTTGCTTCTGTaGTTGCTGCTGCTGTTGGTAGTAGGAAGACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CCSSSCCCCLLL*LLLLLVVGRRS Trigger: GCTGCGTCTTCCTACTACCAACAGCAGCAGCAACAACAGAAGCAAGCAGCAGCAGCAGCTGCTGCTGCAGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122941.8 ENSMUST00000128475.9 |
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| CDS TCA 72 bp | GTACATCACTCTGCAGAGCAGCAAGGGACGCAGGTGTaGCTGGTTCTGACCCTGCATCTTGCTTTACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VHHSAEQQGTQV*LVLTLHLALLL Trigger: CAGAAGTAAAGCAAGATGCAGGGTCAGAACCAGTCACACCTGCGTCCCTTGCTGCTCTGCAGAGTGATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS GCA 72 bp | ATGCTTAGCACCACGAATGTGGGCAGCATATGCATCTaGTCCTGTACAAGACACATCACAGAGCTCGCAACG | + |
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Preference number: 6 (lower is better) Translates to: MLSTTNVGSICI*SCTRHITELAT Trigger: CGTTGCGAGCTCTGTGATGTGTCTTGTACAGGAGCAGATGCATATGCTGCCCACATTCGTGGTGCTAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS GCA 72 bp | TTTCTGATGCTTAGCACCACGAATGTGGGCAGCATATaGATCTGCTCCTGTACAAGACACATCACAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLMLSTTNVGSI*ICSCTRHITEL Trigger: GAGCTCTGTGATGTGTCTTGTACAGGAGCAGATGCATATGCTGCCCACATTCGTGGTGCTAAGCATCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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| CDS CAA 72 bp | ATTTCGTACCTCTTCAACATAATCATGTCCCACTGGTaGTACATCACTCTGCAGAGCAGCAAGGGACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISYLFNIIMSHW*YITLQSSKGRR Trigger: CCTGCGTCCCTTGCTGCTCTGCAGAGTGATGTACAACCAGTGGGACATGATTATGTTGAAGAGGTACGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122941.8 |
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