Pregenerated sensors for ZFP997 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095909Ensembl transcript IDs: ENSMUST00000092528.6, ENSMUST00000238623.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | CCTATGACTTCTTCCATGCCTTGTATGTCTTCGAGAACTTTGACATaGTTCTTCAATATGATGGTCTTCCCATTTGTAGCCTATAGAAGT | + |
Preference number: 5 (lower is better) Translates to: PMTSSMPCMSSRTLT*FFNMMVFPFVAYRS Trigger: ACTTCTATAGGCTACAAATGGGAAGACCATCATATTGAAGAATCATGTCAAAGTTCTCGAAGACATACAAGGCATGGAAGAAGTCATAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092528.6 ENSMUST00000238623.2 |
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CDS TCA 72 bp | TCTTCCATGCCTTGTATGTCTTCGAGAACTTTGACATaGTTCTTCAATATGATGGTCTTCCCATTTGTAGCC | + |
Preference number: 6 (lower is better) Translates to: SSMPCMSSRTLT*FFNMMVFPFVA Trigger: GGCTACAAATGGGAAGACCATCATATTGAAGAATCATGTCAAAGTTCTCGAAGACATACAAGGCATGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092528.6 ENSMUST00000238623.2 |
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CDS CAA 72 bp | CATAGAGTTTCTTCCACCTATGACTTCTTCCATGCCTaGTATGTCTTCGAGAACTTTGACATGATTCTTCAA | + |
Preference number: 6 (lower is better) Translates to: HRVSSTYDFFHA*YVFENFDMILQ Trigger: TTGAAGAATCATGTCAAAGTTCTCGAAGACATACAAGGCATGGAAGAAGTCATAGGTGGAAGAAACTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092528.6 ENSMUST00000238623.2 |