Pregenerated sensors for ZFP994 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096433Ensembl transcript IDs: ENSMUST00000179996.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTaGCACGCCCACTGCTGGAACCTGCAGCTTTGCTGTTTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LKPACSGVELPAHSF*HAHCWNLQLCCLEP Trigger: TGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 90 bp | TGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTaGTGGAACCTGCAGCTTTGCTGTTTGGAGCCACACACATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: CSGVELPAHSFCHAH*WNLQLCCLEPHTCS Trigger: TGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 90 bp | TCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCTaGAACCTGCAGCTTTGCTGTTTGGAGCCACACACATGTTCACCT | + |
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Preference number: 1 (lower is better) Translates to: SGVELPAHSFCHAHC*NLQLCCLEPHTCSP Trigger: AGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 90 bp | TGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCTGGAACCTaGAGCTTTGCTGTTTGGAGCCACACACATGTTCACCTTTCTACT | + |
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Preference number: 1 (lower is better) Translates to: WSFLLIRSATPTAGT*SFAVWSHTHVHLST Trigger: AGTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 90 bp | CTTTGCTGTTTGGAGCCACACACATGTTCACCTTTCTACTGGACCTaGGATTATTCGGCGGAAATCGGGTCCCCTCCCCCTTCCTTCATA | + |
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Preference number: 1 (lower is better) Translates to: LCCLEPHTCSPFYWT*DYSAEIGSPPPSFI Trigger: TATGAAGGAAGGGGGAGGGGACCCGATTTCCGCCGAATAATCTCAGGTCCAGTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 90 bp | ATTCGTTCTGCCACGCCCACTGCTGGAACCTGCAGCTTTGCTGTTTaGAGCCACACACATGTTCACCTTTCTACTGGACCTGAGATTATT | + |
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Preference number: 1 (lower is better) Translates to: IRSATPTAGTCSFAV*SHTHVHLSTGPEII Trigger: AATAATCTCAGGTCCAGTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 90 bp | GACTTGACAATGGTCTGTAGTATTTGCCCATGGATACTTTTGTTCTaGGGGTCAAATTCAAGGAAGAGAGCAGCATTATTGCTCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DLTMVCSICPWILLF*GSNSRKRAALLLQL Trigger: GAGCTGGAGCAATAATGCTGCTCTCTTCCTTGAATTTGACCCTCAGAACAAAAGTATCCATGGGCAAATACTACAGACCATTGTCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 90 bp | TCACTTTCATATCATTTAAAGTACTCTTATGCAAGCAGACTCTCGTaGAGACAAAAGAAGGGTGTCTCACTCCTGAGACCACTGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SLSYHLKYSYASRLS*RQKKGVSLLRPLKR Trigger: TCTTTTCAGTGGTCTCAGGAGTGAGACACCCTTCTTTTGTCTTCACGAGAGTCTGCTTGCATAAGAGTACTTTAAATGATATGAAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCTGCAGCTTTGCTGTTTaGAGCCACACACATGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PACSGVELPAHSFCHAHCCSFAV*SHTHVH Trigger: GTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCA...GCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCGAAGCAGTTAGTAAATaGGAGCACGAGGGACTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PACSGVELPAHSFCHAHCEAVSK*EHEGLK Trigger: TTTGAGTCCCTCGTGCTCTCATTTACTAACTGCTTC...GCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CAA 90 bp | TCCTGCTCATTCGTTCTGCCACGCCCACTGCTGGAACCTGCAGCTTaGCTGTTTGGAGCCACACACATGTTCACCTTTCTACTGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SCSFVLPRPLLEPAA*LFGATHMFTFLLDL Trigger: CAGGTCCAGTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCAGCACCCTATCTTTGTaGCTCAGTTTGTCAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: PACSGVELPAHSFCHAHCSTLSL*LSLSNP Trigger: AGGATTTGACAAACTGAGCCACAAAGATAGGGTGCT...GCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCTAGAACCCAGGTTGTaGTCTGCTGGCCGGACACAA | + |
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Preference number: 2 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFLEPRL*SAGRTQ Trigger: TTGTGTCCGGCCAGCAGACCACAACCTGGGTTCTAG...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTAATAATTCTCTAGTGTaGAGCTTCAAGTGTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFNNSLV*SFKCCQ Trigger: TTGGCAACACTTGAAGCTCCACACTAGAGAATTATT...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | GATCAGAATAACTGTCTTGGCTACATTTCTTTCTCTCGCCACCTAGCCCCTCTTATCCCAAGTGGAAAATaGCAACAACCAAGTTCAACT | + |
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Preference number: 2 (lower is better) Translates to: DQNNCLGYISFSRHLAPLIPSGK*QQPSST Trigger: AGTTGAACTTGGTTGTTGCCATTTTCCACTTGGGAT...AAGAGGGGCTAGGTGGCGAGAGAAAGAAATGTAGCCAAGACAGTTATTCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTGCCAGAGATATTTTCTaGGAGATGCCACATATATAT | + |
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Preference number: 2 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFARDIF*EMPHIY Trigger: ATATATATGTGGCATCTCCCAGAAAATATCTCTGGC...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR TCA 90 bp | GATCAGAATAACTGTCTTGGCTACATTTCTTTCTCTCGCCACCTAGCCCCTCTTGGTTTTGTTTCAGGATaGATGTTCTGGTATGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: DQNNCLGYISFSRHLAPLGFVSG*MFWYVY Trigger: ATACACATACCAGAACATTCATCCTGAAACAAAACC...AAGAGGGGCTAGGTGGCGAGAGAAAGAAATGTAGCCAAGACAGTTATTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR GCA 90 bp | GATCAGAATAACTGTCTTGGCTACATTTCTTTCTCTCGCCACCTAGCCCCTCTTATGGTCTGTAGTATTTaGCCATGGATACTTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: DQNNCLGYISFSRHLAPLMVCSI*PWILLF Trigger: GAACAAAAGTATCCATGGGCAAATACTACAGACCAT...AAGAGGGGCTAGGTGGCGAGAGAAAGAAATGTAGCCAAGACAGTTATTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR TCA 90 bp | TATTCATCTACCCATCCCAAGTGGAAAATGGCAACAACCAAGTTCAACTCGTTACATTCACTTCATTTGTaGAGGTGTCTACTGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: YSSTHPKWKMATTKFNSLHSLHL*RCLLYA Trigger: TGCATACAGTAGACACCTTCACAAATGAAGTGAATG...TAACGAGTTGAACTTGGTTGTTGCCATTTTCCACTTGGGATGGGTAGATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCTATCTTTGTGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGTATAATTTGTGGAGCTTCAAGTGTTaGCAACAATACCGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: HPIFVAQFVKSSFKKYNLWSFKC*QQYRWN Trigger: ATTCCAGCGGTATTGTTGGCAACACTTGAAGCTCCA...CAAATTATACTTCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGATAGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAGGACTCAAAGACAATTaGTATCCTGAAACTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPEIFSGRCHIYIHLPIPGLKDN*YPETEK Trigger: CTTTTCAGTTTCAGGATAGCAATTGTCTTTGAGTCC...TGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCACGCCCACTGCAGGCTAGAACCCAGGTaGTGGTCTGCTGGCCGGACA | + |
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Preference number: 3 (lower is better) Translates to: PACSGVELPAHSFCHAHCRLEPR*WSAGRT Trigger: TGTCCGGCCAGCAGACCACAACCTGGGTTCTAGCCT...GCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | GCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTaGCACGCCCACTGCTGGAACCTGCAGCTTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: ACSGVELPAHSF*HAHCWNLQLCC Trigger: ACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | CTGCTCATTCGTTCTGCCACGCCCACTGCTGGAACCTaGAGCTTTGCTGTTTGGAGCCACACACATGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LLIRSATPTAGT*SFAVWSHTHVH Trigger: GTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAATGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | GCCACGCCCACTGCTGGAACCTGCAGCTTTGCTGTTTaGAGCCACACACATGTTCACCTTTCTACTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: ATPTAGTCSFAV*SHTHVHLSTGP Trigger: AGGTCCAGTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TTGGAGCCACACACATGTTCACCTTTCTACTGGACCTaGGATTATTCGGCGGAAATCGGGTCCCCTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LEPHTCSPFYWT*DYSAEIGSPPP Trigger: AGGGGGAGGGGACCCGATTTCCGCCGAATAATCTCAGGTCCAGTAGAAAGGTGAACATGTGTGTGGCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | TCGTTCTGCCACGCCCACTGCTGGAACCTGCAGCTTTaGTGTTTGGAGCCACACACATGTTCACCTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: SFCHAHCWNLQL*CLEPHTCSPFY Trigger: GTAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | ATGCCTTTCCAGGCTAGAACCCAGGTTGTGGTCTGCTaGCCGGACACAACACCTCATCTTTTGTTCATAGGT | + |
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Preference number: 3 (lower is better) Translates to: MPFQARTQVVVC*PDTTPHLLFIG Trigger: ACCTATGAACAAAAGATGAGGTGTTGTGTCCGGCCAGCAGACCACAACCTGGGTTCTAGCCTGGAAAGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | TTTCCAAAATGCCTTTCCAGGCTAGAACCCAGGTTGTaGTCTGCTGGCCGGACACAACACCTCATCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FPKCLSRLEPRL*SAGRTQHLIFC Trigger: ACAAAAGATGAGGTGTTGTGTCCGGCCAGCAGACCACAACCTGGGTTCTAGCCTGGAAAGGCATTTTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TGGGGTCTACCAGCTACAAAGATGGAATTACCCCAGTaGGCTCACATCCCTGATTTGAAGCACAGTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: WGLPATKMELPQ*AHIPDLKHSWE Trigger: TTCCCAACTGTGCTTCAAATCAGGGATGTGAGCTCACTGGGGTAATTCCATCTTTGTAGCTGGTAGACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | AAAATGCCTTTCCAGGCTAGAACCCAGGTTGTGGTCTaGTGGCCGGACACAACACCTCATCTTTTGTTCATA | + |
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Preference number: 3 (lower is better) Translates to: KMPFQARTQVVV*WPDTTPHLLFI Trigger: TATGAACAAAAGATGAGGTGTTGTGTCCGGCCAGCAGACCACAACCTGGGTTCTAGCCTGGAAAGGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TACAAAGATGGAATTACCCCAGTGAGCTCACATCCCTaGTTTGAAGCACAGTTGGGAATTCTGAGGAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: YKDGITPVSSHP*FEAQLGILRRG Trigger: ACCCCTCCTCAGAATTCCCAACTGTGCTTCAAATCAGGGATGTGAGCTCACTGGGGTAATTCCATCTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TTTGAAGCACAGTTGGGAATTCTGAGGAGGGGTAGGTaGCCTCTATCTTTATCTGTTGGCTCTATCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: FEAQLGILRRGR*PLSLSVGSISR Trigger: CCTAGAGATAGAGCCAACAGATAAAGATAGAGGTCACCTACCCCTCCTCAGAATTCCCAACTGTGCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TGTTACACACAGGACTTAGGGGAAGCAGTTAGTAAATaGGAGCACGAGGGACTCAAAGACAATTGCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: CYTQDLGEAVSK*EHEGLKDNCYP Trigger: AGGATAGCAATTGTCTTTGAGTCCCTCGTGCTCTCATTTACTAACTGCTTCCCCTAAGTCCTGTGTGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTTCTTTGTGGCTCAGTTaGTCAAATCCTCTTTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFSLWLS*SNPLLR Trigger: TCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGA...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR-3UTR CAA 90 bp | GATCAGAATAACTGTCTTGGCTACATTTCTTTCTCTCGCCACCTAGCCCCTCTTGTTTCATTAGCTATTTaGAGGCATGTATTTCGTAGC | + |
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Preference number: 3 (lower is better) Translates to: DQNNCLGYISFSRHLAPLVSLAI*RHVFRS Trigger: GCTACGAAATACATGCCTCAAAATAGCTAATGAAAC...AAGAGGGGCTAGGTGGCGAGAGAAAGAAATGTAGCCAAGACAGTTATTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TATCATTTAAAGTACTCTTATGCAAGCAGACTCTCGTaGAGACAAAAGAAGGGTGTCTCACTCCTGAGACCA | + |
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Preference number: 3 (lower is better) Translates to: YHLKYSYASRLS*RQKKGVSLLRP Trigger: TGGTCTCAGGAGTGAGACACCCTTCTTTTGTCTTCACGAGAGTCTGCTTGCATAAGAGTACTTTAAATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | TTCTCTGAGCATAAATGCTGGGTCGCTCCTAAGATTTaGGGATTACTTAAATGTTTTCCCAACTTCCTCACA | + |
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Preference number: 3 (lower is better) Translates to: FSEHKCWVAPKI*GLLKCFPNFLT Trigger: TGTGAGGAAGTTGGGAAAACATTTAAGTAATCCTCAAATCTTAGGAGCGACCCAGCATTTATGCTCAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | ATGGTCTGTAGTATTTGCCCATGGATACTTTTGTTCTaGGGGTCAAATTCAAGGAAGAGAGCAGCATTATTG | + |
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Preference number: 3 (lower is better) Translates to: MVCSICPWILLF*GSNSRKRAALL Trigger: CAATAATGCTGCTCTCTTCCTTGAATTTGACCCTCAGAACAAAAGTATCCATGGGCAAATACTACAGACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | TCCCAACTTCCTCACATATATAATAATTCTCTAGTGTaGAGCTTCAAGTGTTGCCAACAATACCGCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SQLPHIYNNSLV*SFKCCQQYRWN Trigger: ATTCCAGCGGTATTGTTGGCAACACTTGAAGCTCCACACTAGAGAATTATTATATATGTGAGGAAGTTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | GAGATGCCACATATATATTCATCTACCCATCCCAAGTaGAAAATGGCAACAACCAAGTTCAACTCGTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: EMPHIYSSTHPK*KMATTKFNSLN Trigger: GTTTAACGAGTTGAACTTGGTTGTTGCCATTTTCCACTTGGGATGGGTAGATGAATATATATGTGGCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR TCA 72 bp | AAAATGGCAACAACCAAGTTCAACTCGTTAAACCAATaGGAGTTATTGTTGTTACACACAGGACTTAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: KMATTKFNSLNQ*ELLLLHTGLRG Trigger: TCCCCTAAGTCCTGTGTGTAACAACAATAACTCTCATTGGTTTAACGAGTTGAACTTGGTTGTTGCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CCA 72 bp | AGGCATCTCTACAGGATAAAGAGCACCCTATCTTTGTaGCTCAGTTTGTCAAATCCTCTTTTAAGAAGTATA | + |
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Preference number: 3 (lower is better) Translates to: RHLYRIKSTLSL*LSLSNPLLRSI Trigger: TATACTTCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGATAGGGTGCTCTTTATCCTGTAGAGATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | ACCCTCAAAGGTGTTGCTACCCAAGCTTTAAAACATTaGTCTACTATTCATTTTATGTTGCAAGTTTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: TLKGVATQALKH*STIHFMLQVCR Trigger: TCTGCAAACTTGCAACATAAAATGAATAGTAGAGCAATGTTTTAAAGCTTGGGTAGCAACACCTTTGAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR GCA 72 bp | TGCTACATCACTTTCATATCATTTAAAGTACTCTTATaGAAGCAGACTCTCGTGAAGACAAAAGAAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: CYITFISFKVLL*KQTLVKTKEGC Trigger: ACACCCTTCTTTTGTCTTCACGAGAGTCTGCTTGCATAAGAGTACTTTAAATGATATGAAAGTGATGTAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CAA 72 bp | TTCGTTCTGCCACGCCCACTGCTGGAACCTGCAGCTTaGCTGTTTGGAGCCACACACATGTTCACCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: FVLPRPLLEPAA*LFGATHMFTFL Trigger: TAGAAAGGTGAACATGTGTGTGGCTCCAAACAGCAAAGCTGCAGGTTCCAGCAGTGGGCGTGGCAGAACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CAA 72 bp | AGGTTTCCAAAATGCCTTTCCAGGCTAGAACCCAGGTaGTGGTCTGCTGGCCGGACACAACACCTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: RFPKCLSRLEPR*WSAGRTQHLIF Trigger: AAAGATGAGGTGTTGTGTCCGGCCAGCAGACCACAACCTGGGTTCTAGCCTGGAAAGGCATTTTGGAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR TCA 90 bp | TTGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCACCACAGCCACATCCTTaGACGTTAACTGACCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPEIFSGRCHIYIHLPIPPQPHP*TLTDPE Trigger: CTCAGGGTCAGTTAACGTTCAAGGATGTGGCTGTGG...TGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CCA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAACTTCCGGTGAACTCATaGATGATCTTGTCAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CQRYFLGDATYIFIYPSQLPVNS*MILSSS Trigger: TGAGCTTGACAAGATCATCCATGAGTTCACCGGAAG...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCTAAGATCACCTTTATaGGAAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFLRSPL*EKHLSH Trigger: ATGTGACAAATGCTTTTCCCATAAAGGTGATCTTAG...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR TCA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAAGATCACCAACTTGAATaGAGCATTTCTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: CQRYFLGDATYIFIYPSQDHQLE*SISHIH Trigger: GTGAATGTGAGAAATGCTTCATTCAAGTTGGTGATC...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CCA 90 bp | TTGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCACTAAGACTGCCTTTGTaGGAAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LPEIFSGRCHIYIHLPIPLRLPL*EKHLSH Trigger: ATGTGACAAATGCTTTTCCCACAAAGGCAGTCTTAG...TGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CAA 72 bp | TGTAGGCATCTCTACAGGATAAAGAGCACCCTATCTTaGTGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CRHLYRIKSTLS*WLSLSNPLLRS Trigger: ACTTCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGATAGGGTGCTCTTTATCCTGTAGAGATGCCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CCA 90 bp | TTGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCACTAAGACTGCCTTTTTaGGTAAAGGATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LPEIFSGRCHIYIHLPIPLRLPF*VKDLSH Trigger: ATGTGACAAATCCTTTACCCAAAAAGGCAGTCTTAG...TGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CCA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAACTAAGACTGCCTTTTTaGGTAAAGCTTTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: CQRYFLGDATYIFIYPSQLRLPF*VKLLSH Trigger: ATGTGACAAAAGCTTTACCCAAAAAGGCAGTCTTAG...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| 3UTR CAA 72 bp | AAGTTTGCAGAAAATATTAATGTGTTCAGCACACTTTaGCCAGAGATATTTTCTGGGAGATGCCACATATAT | + |
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Preference number: 4 (lower is better) Translates to: KFAENINVFSTL*PEIFSGRCHIY Trigger: ATATATGTGGCATCTCCCAGAAAATATCTCTGGCAAAAGTGTGCTGAACACATTAATATTTTCTGCAAACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTACTAAGACTGCCTTTTaGGGTAAAGCTTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFTKTAF*GKAFVT Trigger: TGTGACAAAAGCTTTACCCAAAAAGGCAGTCTTAGT...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCGCCACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTTCAAGCTTTGCACCATaGTATTCTTTCTTTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: FFLSPPSPSSLPGFQNAFSSFAP*YSFFPM Trigger: CATAGGAAAGAAAGAATACAATGGTGCAAAGCTTGA...AAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGGCTAGGTGGCGAGAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | GATCAGAATAACTGTCTTGGCTACATTTCTTTCTCTCGCCACCTAGCCCCTCTTTTCAGGGCAAAAGATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: DQNNCLGYISFSRHLAPLFRAKD*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATCTTTTGCCCTGAA...AAGAGGGGCTAGGTGGCGAGAGAAAGAAATGTAGCCAAGACAGTTATTCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAATTGCAAGGTTCTCTGTaGTTTTCAGTTTCATGTCTG | + |
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Preference number: 5 (lower is better) Translates to: CQRYFLGDATYIFIYPSQLQGSL*FSVSCL Trigger: CAGACATGAAACTGAAAACAACAGAGAACCTTGCAA...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAAGGTTTCTTTACACTTTaGGTTTGTTTCAACATGAGG | + |
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Preference number: 5 (lower is better) Translates to: CQRYFLGDATYIFIYPSQGFFTL*VCFNMR Trigger: CCTCATGTTGAAACAAACCAAAAGTGTAAAGAAACC...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCAATTCTTGGCAAAACATTaGGCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: CQRYFLGDATYIFIYPSQFLAKH*AHSLHL Trigger: CAAATGTAGTGAATGTGCCAAATGTTTTGCCAAGAA...TTGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | TTGCCAGAGATATTTTCTGGGAGATGCCACATATATATTCATCTACCCATCCCATTTCGGGTAAAGTACTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: LPEIFSGRCHIYIHLPIPFRVKY*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAGTACTTTACCCGAAA...TGGGATGGGTAGATGAATATATATGTGGCATCTCCCAGAAAATATCTCTGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | CACCCTATCTTTGTGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGTATAATTTGATACTAAGACTGCCTTaGTGGGAAAAGCATTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: HPIFVAQFVKSSFKKYNLILRLP*WEKHLS Trigger: TGACAAATGCTTTTCCCACAAAGGCAGTCTTAGTAT...CAAATTATACTTCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGATAGGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS-3UTR CAA 90 bp | CACCCTATCTTTGTGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGTATAATTTGTTGAGGGAAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: HPIFVAQFVKSSFKKYNLLREKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTTCCCTCAA...CAAATTATACTTCTTAAAAGAGGATTTGACAAACTGAGCCACAAAGATAGGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS TCA 72 bp | GTATTTACATGTTCGAGGACAATATGCTGTAGGTCTTaGTCCAACATCTTCTCAAATTTAGGACACATGCAA | + |
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Preference number: 6 (lower is better) Translates to: VFTCSRTICCRS*SNIFSNLGHMQ Trigger: TTGCATGTGTCCTAAATTTGAGAAGATGTTGGATCAAGACCTACAGCATATTGTCCTCGAACATGTAAATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS TCA 72 bp | GCACCATTGTATTCTTTCTTTCCTATGTTGATTCCTTaGTTTAGACTAATGGTAGAGCACAAATTGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: APLYSFFPMLIP*FRLMVEHKLKQ Trigger: CTGTTTCAATTTGTGCTCTACCATTAGTCTAAATCAAGGAATCAACATAGGAAAGAAAGAATACAATGGTGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS GCA 72 bp | GAGGATTTCTTTAGAGTCAAAAACCTTATCAAGCTTTaGACCATTGTATTCTTTCTTTCCTATGTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: EDFFRVKNLIKL*TIVFFLSYVDS Trigger: GGAATCAACATAGGAAAGAAAGAATACAATGGTGCAAAGCTTGATAAGGTTTTTGACTCTAAAGAAATCCTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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| CDS CAA 72 bp | GAGCACAAATTGAAACAGTTTACATGGTTTTCATATTaGCAAGGTTCTCTGTTGTTTTCAGTTTCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EHKLKQFTWFSY*QGSLLFSVSCL Trigger: CAGACATGAAACTGAAAACAACAGAGAACCTTGCAAATATGAAAACCATGTAAACTGTTTCAATTTGTGCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179996.3 |
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