Pregenerated sensors for ZFP992 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070605Ensembl transcript IDs: ENSMUST00000105733.3
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCACACAGCATTGCGTTATCCAAAGATGGGCAACTTTCCTCATaGACAGAGCAACCTAAGACACGGGGCCTGGTGGCGATAGGGTTA | + |
|
Preference number: 1 (lower is better) Translates to: LSHSIALSKDGQLSS*TEQPKTRGLVAIGL Trigger: TAACCCTATCGCCACCAGGCCCCGTGTCTTAGGTTGCTCTGTGCATGAGGAAAGTTGCCCATCTTTGGATAACGCAATGCTGTGTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 90 bp | GATCCGATGGACGGCTCATTACACAGCCCAGATCCTGTACTTTTATaGGGCCGTGGGTATGTTTATGTTTTCCCAACAGACACACCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: DPMDGSLHSPDPVLL*GRGYVYVFPTDTPS Trigger: GGAAGGTGTGTCTGTTGGGAAAACATAAACATACCCACGGCCCCATAAAAGTACAGGATCTGGGCTGTGTAATGAGCCGTCCATCGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 90 bp | TGTTGTGGCATCTTACTTGCTGGCGAGTGGGAGTCCACAATTACCTaGATTCCTATGTGGAATATCATGGCATTTCAGGACAAACACAAT | + |
|
Preference number: 1 (lower is better) Translates to: CCGILLAGEWESTIT*IPMWNIMAFQDKHN Trigger: ATTGTGTTTGTCCTGAAATGCCATGATATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACTCGCCAGCAAGTAAGATGCCACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 90 bp | GATTTAAGAAAAGAATGGAAATCTATTTTATTCCTTACGGTAGAGTaGAGTATTAAGGCACAACAGGACCAGACACCACAATGTCTTGTA | + |
|
Preference number: 1 (lower is better) Translates to: DLRKEWKSILFLTVE*SIKAQQDQTPQCLV Trigger: TACAAGACATTGTGGTGTCTGGTCCTGTTGTGCCTTAATACTCCACTCTACCGTAAGGAATAAAATAGATTTCCATTCTTTTCTTAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 90 bp | AAGCAACCTGATTATGTTTATTTACCAGTTAATTTAACTAAGGATTaGTATGATGATAAAGGCCGAGGAATTCTTGAGCATGCAACCACA | + |
|
Preference number: 1 (lower is better) Translates to: KQPDYVYLPVNLTKD*YDDKGRGILEHATT Trigger: TGTGGTTGCATGCTCAAGAATTCCTCGGCCTTTATCATCATACCAATCCTTAGTTAAATTAACTGGTAAATAAACATAATCAGGTTGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 90 bp | TATTGGGCATATGTTCCAAATCCACCTATAATTCATCCTGTCACTTaGGATGAGACTGTAGATATTACTGTTTATGTCAATCAAACCAAA | + |
|
Preference number: 1 (lower is better) Translates to: YWAYVPNPPIIHPVT*DETVDITVYVNQTK Trigger: TTTGGTTTGATTGACATAAACAGTAATATCTACAGTCTCATCCCAAGTGACAGGATGAATTATAGGTGGATTTGGAACATATGCCCAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAGGTTGCCAACCCAGTGTGTACACCATGCTGAAAACCAAGATGGGAATAAATATGCTGTCTGGGTaGCTCAGTTTGCCAGATATT | + |
|
Preference number: 2 (lower is better) Translates to: LGGCQPSVYTMLKTKMGINMLSG*LSLPDI Trigger: AATATCTGGCAAACTGAGCCACCCAGACAGCATATT...TATTCCCATCTTGGTTTTCAGCATGGTGTACACACTGGGTTGGCAACCTCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGGGGTCTTTCGCCTACTCAGTCCATGCTCTCCCAATAAACATGTTGCAGAAGACCTGGATTCCTATGTaGAATATCATGGCATTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SGSFAYSVHALPINMLQKTWIPM*NIMAFQ Trigger: CTGAAATGCCATGATATTCCACATAGGAATCCAGGT...CTTCTGCAACATGTTTATTGGGAGAGCATGGACTGAGTAGGCGAAAGACCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CCA 90 bp | ACATCGAGGCAGCTCTGCATAAGTTTATTGGGCATATGTTCCAAATCCACCTATAAAAAGGGGGAGATGTaGGAAGCCGCAAACGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: TSRQLCISLLGICSKSTYKKGEM*EAANAI Trigger: AATGGCGTTTGCGGCTTCCCACATCTCCCCCTTTTT...ATAGGTGGATTTGGAACATATGCCCAATAAACTTATGCAGAGCTGCCTCGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGCGAGTGGGAGTCCACAATTACCTGGATTCCTATGTGGAATATCATGGCATTTATGGTTACAGCAATTaGTTCTGTGTCCTTAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: WRVGVHNYLDSYVEYHGIYGYSN*FCVLSA Trigger: TGCACTAAGGACACAGAAGCAATTGCTGTAACCATA...AATGCCATGATATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACTCGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCTATTATGGTTACAGCAATTGCTTCTGTGTCCTTAGTGCAAAGTATACACAAAGAATATGCTGTCTaGGTGGCTCAGTTTGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSIMVTAIASVSLVQSIHKEYAV*VAQFAR Trigger: TCTGGCAAACTGAGCCACCCAGACAGCATATTCTTT...GTGTATACTTTGCACTAAGGACACAGAAGCAATTGCTGTAACCATAATAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTCATCCTGTCACTTGGGATGAGACTGTAGATATTACTGTTTATGTCAATCAACGCCTACTCAGTCCATaGTCTCCCAATAAACATGTT | + |
|
Preference number: 2 (lower is better) Translates to: IHPVTWDETVDITVYVNQRLLSP*SPNKHV Trigger: AACATGTTTATTGGGAGAGCATGGACTGAGTAGGCG...TTGATTGACATAAACAGTAATATCTACAGTCTCATCCCAAGTGACAGGATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CCA 90 bp | TATTCTGATGGACATATATTACAATTTCATGCCTTTGCTCTAATACCACCCTGTGAGTCCACAATTACCTaGATTCCTATGTGGAATATC | + |
|
Preference number: 2 (lower is better) Translates to: YSDGHILQFHAFALIPPCESTIT*IPMWNI Trigger: GATATTCCACATAGGAATCCAGGTAATTGTGGACTC...ACAGGGTGGTATTAGAGCAAAGGCATGAAATTGTAATATATGTCCATCAGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR GCA 72 bp | AGCATTGCGTTATCCAAAGATGGGCAACTTTCCTCATaGACAGAGCAACCTAAGACACGGGGCCTGGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SIALSKDGQLSS*TEQPKTRGLVA Trigger: CGCCACCAGGCCCCGTGTCTTAGGTTGCTCTGTGCATGAGGAAAGTTGCCCATCTTTGGATAACGCAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR GCA 72 bp | TTTCTGGGGCTCGGGGTCTTTCGCCTACTCAGTCCATaGTCTCCCAATAAACATGTTGCAGAAGGATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLGLGVFRLLSP*SPNKHVAEGSC Trigger: ACAGGATCCTTCTGCAACATGTTTATTGGGAGAGCATGGACTGAGTAGGCGAAAGACCCCGAGCCCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 72 bp | GAAGGATCCTGTTGTGGCATCTTACTTGCTGGCGAGTaGGAGTCCACAATTACCTGGATTCCTATGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: EGSCCGILLAGE*ESTITWIPMWN Trigger: ATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACTCGCCAGCAAGTAAGATGCCACAACAGGATCCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 72 bp | GACGGCTCATTACACAGCCCAGATCCTGTACTTTTATaGGGCCGTGGGTATGTTTATGTTTTCCCAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DGSLHSPDPVLL*GRGYVYVFPTD Trigger: GTCTGTTGGGAAAACATAAACATACCCACGGCCCCATAAAAGTACAGGATCTGGGCTGTGTAATGAGCCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGAGTGGGAGTCCACAATTACCTGGATTCCTATGTGGAATATCATGGCATTGCAACCACAGAATTGTaGTTGCGATCTAAAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WRVGVHNYLDSYVEYHGIATTEL*LRSKRA Trigger: GGCCCTTTTAGATCGCAACAACAATTCTGTGGTTGC...AATGCCATGATATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACTCGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR TCA 72 bp | TACAAGATGGCACTGGTTTCAGTAAGCCAATGCCCATaGATATGGGTAAACAACCAATGTGCGCATGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YKMALVSVSQCP*IWVNNQCAHVP Trigger: TGGCACATGCGCACATTGGTTGTTTACCCATATTCATGGGCATTGGCTTACTGAAACCAGTGCCATCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 72 bp | GGCGAGTGGGAGTCCACAATTACCTGGATTCCTATGTaGAATATCATGGCATTTCAGGACAAACACAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: GEWESTITWIPM*NIMAFQDKHNK Trigger: CTTATTGTGTTTGTCCTGAAATGCCATGATATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACTCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR GCA 72 bp | GGCTGTCCTGATAGTTTCTATTATGGTTACAGCAATTaGTTCTGTGTCCTTAGTGCAAAGTATACACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GCPDSFYYGYSN*FCVLSAKYTHC Trigger: GCAGTGTGTATACTTTGCACTAAGGACACAGAAGCAATTGCTGTAACCATAATAGAAACTATCAGGACAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR GCA 72 bp | CGACCTAAAACAGGAGCCGTAGTGGATGGACATAATTaGATAGGCCTAATCCAGCATCATTTTATTACAATA | + |
|
Preference number: 3 (lower is better) Translates to: RPKTGAVVDGHN*IGLIQHHFITI Trigger: TATTGTAATAAAATGATGCTGGATTAGGCCTATGCAATTATGTCCATCCACTACGGCTCCTGTTTTAGGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 72 bp | CTTGGGATGATAACAGTTAAAAGAATTAACATCACCTaGCTTCCTATCGGGAATATCATGGCATTTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGMITVKRINIT*LPIGNIMAFQD Trigger: GTCCTGAAATGCCATGATATTCCCGATAGGAAGCCAGGTGATGTTAATTCTTTTAACTGTTATCATCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR GCA 72 bp | AAAATAAGTCATTTAGCAATTACTGTCACACAGCATTaGGTTATCCAAAGATGGGCAACTTTCCTCATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KISHLAITVTQH*VIQRWATFLMH Trigger: GTGCATGAGGAAAGTTGCCCATCTTTGGATAACGCAATGCTGTGTGACAGTAATTGCTAAATGACTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGAACAAAATAAGTCATTTAGCAATTACTGTCACACAGCATTGCGTTATCCAAACCACAGAATTGTTGTaGCGATCTAAAAGGGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: TNKISHLAITVTQHCVIQTTELL*RSKRAI Trigger: TATGGCCCTTTTAGATCGCAACAACAATTCTGTGGT...TTGGATAACGCAATGCTGTGTGACAGTAATTGCTAAATGACTTATTTTGTTCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR TCA 72 bp | TCCAAATCCACCTATAATTCATCCTGTCACTTGGGATaGGACTGTAGATATTACTGTTTATGTCAATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSTYNSSCHLG*DCRYYCLCQSN Trigger: GTTTGATTGACATAAACAGTAATATCTACAGTCTCATCCCAAGTGACAGGATGAATTATAGGTGGATTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CCA 72 bp | TATGTTCCAAATCCACCTATAATTCATCCTGTCACTTaGGATGAGACTGTAGATATTACTGTTTATGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YVPNPPIIHPVT*DETVDITVYVN Trigger: ATTGACATAAACAGTAATATCTACAGTCTCATCCCAAGTGACAGGATGAATTATAGGTGGATTTGGAACATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTCGGGGTCTTTCGCCTACTCAGTCCATGCTCTCCCAATAAACATGTTGTGCATGTGGATTCCCTaGTTGAGACTAATGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGSGSFAYSVHALPINMLCMWIP*LRLMVE Trigger: TTCTACCATTAGTCTCAATCAGGGAATCCACATGCA...CAACATGTTTATTGGGAGAGCATGGACTGAGTAGGCGAAAGACCCCGAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CAA 72 bp | TTCGCCTACTCAGTCCATGCTCTCCCAATAAACATGTaGCAGAAGGATCCTGTTGTGGCATCTTACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FAYSVHALPINM*QKDPVVASYLL Trigger: CAGCAAGTAAGATGCCACAACAGGATCCTTCTGCAACATGTTTATTGGGAGAGCATGGACTGAGTAGGCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| CDS-3UTR TCA 90 bp | ACATCGAGGCAGCTCTGCATAAGTTTATTGGGCATATGTTCCAAATCCACCTATTCCTCTGAGCAAAACTaGGAGATTCCCATTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSRQLCISLLGICSKSTYSSEQN*EIPIPP Trigger: TGGAGGAATGGGAATCTCTCAGTTTTGCTCAGAGGA...ATAGGTGGATTTGGAACATATGCCCAATAAACTTATGCAGAGCTGCCTCGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAGTCCACAATTACCTGGATTCCTATGTGGAATATCATGGCATTTCAGGATGTACAATGTCCTCTaGGCAAAACTGAGAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPQLPGFLCGISWHFRMYNVL*AKLRDS Trigger: GGAATCTCTCAGTTTTGCTCAGAGGACATTGTACAT...CCTGAAATGCCATGATATTCCACATAGGAATCCAGGTAATTGTGGACTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||
| 3UTR CAA 72 bp | CAAAATAAGTCATTTAGCAATTACTGTCACACAGCATaGCGTTATCCAAAGATGGGCAACTTTCCTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNKSFSNYCHTA*RYPKMGNFPHA Trigger: TGCATGAGGAAAGTTGCCCATCTTTGGATAACGCAATGCTGTGTGACAGTAATTGCTAAATGACTTATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105733.3 |
||