Pregenerated sensors for ZFP990 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078503Ensembl transcript IDs: ENSMUST00000105741.2, ENSMUST00000105742.8
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAACTTAGATGTTCTCTCTaGCCTGAAATGAAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQLRCSL*PEMKSK Trigger: CTTTGACTTCATTTCAGGTCAGAGAGAACATCTAAG...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAACTCTCTGACCTGAAATaGAGTCAAAGATATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQLSDLK*SQRYFF Trigger: GAAGAAATATCTTTGACTTCATTTCAGGTCAGAGAG...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTCTTAGATGTTCTCTCTaGCCTGAAATGAAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFLRCSL*PEMKSK Trigger: CTTTGACTTCATTTCAGGTCAGAGAGAACATCTAAG...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTCACAATACTATCTTCTaGCTTCCCAACTTGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFHNTIF*LPNLSS Trigger: TGAAGACAAGTTGGGAAGTCAGAAGATAGTATTGTG...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTCTCTCTGACCTGAAATaGAGTCAAAGATATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFLSDLK*SQRYFF Trigger: GAAGAAATATCTTTGACTTCATTTCAGGTCAGAGAG...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR-3UTR CAA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAAGTGGAGCCTCAAGTGTaGTCAAGAATACAATATTTT | + |
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Preference number: 3 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQVEPQV*SRIQYF Trigger: AAAATATTGTATTCTTGACAACACTTGAGGCTCCAC...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR CCA 72 bp | AAGCATATTTACAGGATAAAGAATATGCTGTCTGGGTaGCTCAGTTTGCCAGATACTCTTTTAAGGATATTT | + |
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Preference number: 3 (lower is better) Translates to: KHIYRIKNMLSG*LSLPDTLLRIF Trigger: AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTTTATCCTGTAAATATGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR GCA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAACATTCTTTCCACGTATaGAATGATTTTCCACGAACA | + |
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Preference number: 4 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQHSFHV*NDFPRT Trigger: TGTTCGTGGAAAATCATTGCATACGTGGAAAGAATG...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR CAA 72 bp | ATTGGAGTTAGTTACAGGACAATAAGAAAGGAGTTGTaGAGCAGATCACAAGAGACTCAGACTCACTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: IGVSYRTIRKEL*SRSQETQTHLL Trigger: TAACAAGTGAGTCTGAGTCTCTTGTGATCTGCTCAACAACTCCTTTCTTATTGTCCTGTAACTAACTCCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR CAA 72 bp | TTTATTGGAGTTAGTTACAGGACAATAAGAAAGGAGTaGTTGAGCAGATCACAAGAGACTCAGACTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: FIGVSYRTIRKE*LSRSQETQTHL Trigger: CAAGTGAGTCTGAGTCTCTTGTGATCTGCTCAACAACTCCTTTCTTATTGTCCTGTAACTAACTCCAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CCA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTTTAAGATGGGATTTGTaGGTAAAGGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFLRWDL*VKDLSH Trigger: ATGTGACAAATCCTTTACCCACAAATCCCATCTTAA...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| 3UTR CAA 72 bp | GAGTTGTTGAGCAGATCACAAGAGACTCAGACTCACTaGTTATCCTATAATGTGAAACAAGTATTTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ELLSRSQETQTH*LSYNVKQVFEN Trigger: ATTCTCAAATACTTGTTTCACATTATAGGATAACAAGTGAGTCTGAGTCTCTTGTGATCTGCTCAACAACTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAAATCACATTGCTAAGCTaGTCCCATTTAGAAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQITLLS*SHLEDF Trigger: GAAGTCTTCTAAATGGGACAAGCTTAGCAATGTGAT...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTTTTTTGGTTCGAGTATaGAAGAGAGTCAGAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFFLVRV*KRVRAV Trigger: CACAGCTCTGACTCTCTTCAATACTCGAACCAAAAA...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGGTGAACAATTTCGGGTAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: LSSDFPTCLHLVTFEGEQFRVKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTACCCGAAA...TTGTTCACCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTATCACATTGCTAAGCTaGTCCCATTTAGAAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFITLLS*SHLEDF Trigger: GAAGTCTTCTAAATGGGACAAGCTTAGCAATGTGAT...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTGATTCAAGAATCACATaGCTAAGCTTGTCCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFDSRIT*LSLSHL Trigger: TAAATGGGACAAGCTTAGCAATGTGATTCTTGAATC...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTCTGCATGTAAATTCCTaGATTGACACTAATGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFLHVNS*IDTNGR Trigger: TCTACCATTAGTGTCAATCAAGGAATTTACATGCAG...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTTCTCAGACTGCTTTTTaGAGTAAAGCATTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFSQTAF*SKAFVT Trigger: TGTGACAAATGCTTTACTCAAAAAAGCAGTCTGAGA...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS-3UTR CAA 90 bp | AAGAATATGCTGTCTGGGTGGCTCAGTTTGCCAGATACTCTTTTAAGGATATTTTTGTGGGTAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: KNMLSGWLSLPDTLLRIFLWVKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTACCCACAA...AAATATCCTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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| CDS CAA 72 bp | GCAAACTTCTTTAGTGTTCCTGGGTTTAAGTCTTTTTaGGTTCGAGTATTGAAGAGAGTCAGAGCTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: ANFFSVPGFKSF*VRVLKRVRAVI Trigger: AATCACAGCTCTGACTCTCTTCAATACTCGAACCAAAAAAGACTTAAACCCAGGAACACTAAAGAAGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105741.2 ENSMUST00000105742.8 |
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