Pregenerated sensors for ZFP988 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078498

Ensembl transcript IDs: ENSMUST00000148762.4

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 72 bp	TCACAAGATTTTCATAATCATACTAATTCTCTAGTGTaGAGCCTCAAGTGTTGTCAAGAATACACCATTTTC	+
Preference number: 3 (lower is better) Translates to: SQDFHNHTNSLV*SLKCCQEYTIF Trigger: GAAAATGGTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATGAAAATCTTGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR TCA 90 bp	CTTCATCTGGTAACGTTTGAGGATGAACAAGTAAAAAGGTGTCATGAAAAGCTTTTCCCATTCCTCCAGTaGGAAGTCCAAGGCCACGTC	+
Preference number: 4 (lower is better) Translates to: LHLVTFEDEQVKRCHEKLFPFLQ*EVQGHV Trigger: GACGTGGCCTTGGACTTCTCACTGGAGGAATGGGAA...AAGCTTTTCATGACACCTTTTTACTTGTTCATCCTCAAACGTTACCAGATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR TCA 90 bp	ACTAATTCTCTAGTGTGGAGCCTCAAGTGTTGTCAAGAATACACCATTTTCCCCACCTCTGAGCAAAACTaGGACATTCCCATTCCTCCA	+
Preference number: 4 (lower is better) Translates to: TNSLVWSLKCCQEYTIFPTSEQN*DIPIPP Trigger: TGGAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGT...GGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR TCA 90 bp	CTATCTTCTGACTTCCCAACTTGTCTTCATCTGGTAACGTTTGAGGATGAACAACACATCCATGTACAATaGCCTCTGAGCAAAACTGAG	+
Preference number: 4 (lower is better) Translates to: LSSDFPTCLHLVTFEDEQHIHVQ*PLSKTE Trigger: CTCAGTTTTGCTCAGAGGTCATTGTACATGGATGTG...TTGTTCATCCTCAAACGTTACCAGATGAAGACAAGTTGGGAAGTCAGAAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR TCA 90 bp	TCAAGTGTTGTCAAGAATACACCATTTTCCCCAACAGAAATACTTTACCCTAAAATGTACAATGACCTCTaGGCAAAACTGAGACATTCC	+
Preference number: 4 (lower is better) Translates to: SSVVKNTPFSPTEILYPKMYNDL*AKLRHS Trigger: GGAATGTCTCAGTTTTGCTCAGAGGTCATTGTACAT...TTTAGGGTAAAGTATTTCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR CCA 90 bp	TCAAGTGTTGTCAAGAATACACCATTTTCCCCAACAGAAATACTTTACCCTAAACTAAGACAGGATTGTTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: SSVVKNTPFSPTEILYPKLRQDC*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAACAATCCTGTCTTAG...TTTAGGGTAAAGTATTTCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR CCA 90 bp	CTTCATCTGGTAACGTTTGAGGATGAACAAGTAAAAAGGTGTCATGAAAAGCTTGTAAGATTGGATTGTTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: LHLVTFEDEQVKRCHEKLVRLDC*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAACAATCCAATCTTAC...AAGCTTTTCATGACACCTTTTTACTTGTTCATCCTCAAACGTTACCAGATGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR CAA 90 bp	TGGAGCCTCAAGTGTTGTCAAGAATACACCATTTTCCCCAACAGAAATACTTTAACTAAGACAGGATTGTaGGGTAAAGCATTTGTCACA	+
Preference number: 5 (lower is better) Translates to: WSLKCCQEYTIFPNRNTLTKTGL*GKAFVT Trigger: TGTGACAAATGCTTTACCCAACAATCCTGTCTTAGT...TAAAGTATTTCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148762.4
CDS-3UTR CAA 90 bp	GATTTTCATAATCATACTAATTCTCTAGTGTGGAGCCTCAAGTGTTGTCAAGAAAGTAAGATTGGATTGTaGGGTAAAGCATTTGTCACA	+
Preference number: 5 (lower is better) Translates to: DFHNHTNSLVWSLKCCQESKIGL*GKAFVT Trigger: TGTGACAAATGCTTTACCCAACAATCCAATCTTACT...TTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATGAAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148762.4