Pregenerated sensors for ZFP987 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066009

Ensembl transcript IDs: ENSMUST00000091878.6, ENSMUST00000105730.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	TGGAGCCTCAAGTGTTGTCAAGAATACAACATTTTCCCCAACAGAAATACTTTACTAAGATGGGATTGTTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: WSLKCCQEYNIFPNRNTLLRWDC*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAACAATCCCATCTTAG...TAAAGTATTTCTGTTGGGGAAAATGTTGTATTCTTGACAACACTTGAGGCTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CCA 90 bp	CATAATCATACTAATTCTCTAGTGTGGAGCCTCAAGTGTTGTCAAGAATACAACCTAAGATGGGATTTCTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: HNHTNSLVWSLKCCQEYNLRWDF*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAAATCCCATCTTAG...GTTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CCA 90 bp	CATAATCATACTAATTCTCTAGTGTGGAGCCTCAAGTGTTGTCAAGAATACAACCTAAGATTGGATTGTTaGGTAAAGCATTTGTCACAT	+
Preference number: 4 (lower is better) Translates to: HNHTNSLVWSLKCCQEYNLRLDC*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAACAATCCAATCTTAG...GTTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CCA 90 bp	TGGAGCCTCAAGTGTTGTCAAGAATACAACATTTTCCCCAACAGAAATACTTTAAATACTAAGATGGGATaGTTTGGTAAAGCATTTGTC	+
Preference number: 4 (lower is better) Translates to: WSLKCCQEYNIFPNRNTLNTKMG*FGKAFV Trigger: GACAAATGCTTTACCAAACCATCCCATCTTAGTATT...TAAAGTATTTCTGTTGGGGAAAATGTTGTATTCTTGACAACACTTGAGGCTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CAA 90 bp	GAGCCTCAAGTGTTGTCAAGAATACAACATTTTCCCCAACAGAAATACTTTACCACTAAGATAGGATTCTaGGGTAAAGCATTTGTCACA	+
Preference number: 5 (lower is better) Translates to: EPQVLSRIQHFPQQKYFTTKIGF*GKAFVT Trigger: TGTGACAAATGCTTTACCCAAGAATCCTATCTTAGT...GGTAAAGTATTTCTGTTGGGGAAAATGTTGTATTCTTGACAACACTTGAGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CAA 90 bp	GAGCCTCAAGTGTTGTCAAGAATACAACATTTTCCCCAACAGAAATACTTTACCTTTCGGGAAAAGCATTaGTCACATTCACTACATTTG	+
Preference number: 5 (lower is better) Translates to: EPQVLSRIQHFPQQKYFTFREKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTTCCCGAAA...GGTAAAGTATTTCTGTTGGGGAAAATGTTGTATTCTTGACAACACTTGAGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS-3UTR CAA 90 bp	CATAATCATACTAATTCTCTAGTGTGGAGCCTCAAGTGTTGTCAAGAATACAACACTAAGATTGGATTGTaGGGTAAAGCATTTGTCACA	+
Preference number: 5 (lower is better) Translates to: HNHTNSLVWSLKCCQEYNTKIGL*GKAFVT Trigger: TGTGACAAATGCTTTACCCAACAATCCAATCTTAGT...GTTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091878.6
CDS CAA 72 bp	CCTGTGGTGTATTTACCAGACACACACTCATTCTTGTaGTTGTCCTTCTCCCAGGGTCCAGTGAAGAACAAA	+
Preference number: 6 (lower is better) Translates to: PVVYLPDTHSFL*LSFSQGPVKNK Trigger: TTTGTTCTTCACTGGACCCTGGGAGAAGGACAACAACAAGAATGAGTGTGTGTCTGGTAAATACACCACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105730.2

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