RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP985 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000065999

Ensembl transcript IDs: ENSMUST00000081742.7, ENSMUST00000139784.8, ENSMUST00000143885.8

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GACAATAGGAAAGGAGTTGTTGACCAGATCACAAGAAACTCAGAGTCATTTGTTAATATGCTGTCTGGGTaGCTCAGTTTGCCAGGTACT +
Preference number: 2 (lower is better)
Translates to: DNRKGVVDQITRNSESFVNMLSG*LSLPGT
Trigger: AGTACCTGGCAAACTGAGCCACCCAGACAGCATATT...AACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR-3UTR TCA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCCTCTCTATCCTGAAGTaGAGTCAAAGATATTTCTTC +
Preference number: 2 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSLSILK*SQRYFF
Trigger: GAAGAAATATCTTTGACTTCACTTCAGGATAGAGAG...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR-3UTR TCA 90 bp GACAATAGGAAAGGAGTTGTTGACCAGATCACAAGAAACTCAGAGTCATTTGTTCTCAGACTGACATTGTaGGTATTGTATTTGTCACAT +
Preference number: 2 (lower is better)
Translates to: DNRKGVVDQITRNSESFVLRLTL*VLYLSH
Trigger: ATGTGACAAATACAATACTCACAATGTCAGTCTGAG...AACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR CAA 90 bp TCTTTCAGCTTTATTGGAGTTAGTTACAGGACAATAGGAAAGGAGTaGTTGACCAGATCACAAGAAACTCAGAGTCATTTGTTATCCTAT +
Preference number: 2 (lower is better)
Translates to: SFSFIGVSYRTIGKE*LTRSQETQSHLLSY
Trigger: ATAGGATAACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATAAAGCTGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR CAA 90 bp TTCAGCTTTATTGGAGTTAGTTACAGGACAATAGGAAAGGAGTTGTaGACCAGATCACAAGAAACTCAGAGTCATTTGTTATCCTATAAT +
Preference number: 2 (lower is better)
Translates to: FSFIGVSYRTIGKEL*TRSQETQSHLLSYN
Trigger: ATTATAGGATAACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATAAAGCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR GCA 72 bp AATCACACTAATTCTCTAGTGTGGAGCCTCAAGTGTTaGCAGGACACCATGAATAAAACATATGCCACATTT +
Preference number: 3 (lower is better)
Translates to: NHTNSLVWSLKC*QDTMNKTYATF
Trigger: AAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCACACTAGAGAATTAGTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR TCA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCATGTACAGTGTCCTCTaGGCAAAACTGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSMYSVL*AKLRRS
Trigger: GGAACGTCTCAGTTTTGCTCAGAGGACACTGTACAT...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR GCA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCATTTGTGAAATTCACTaGATTTGTAAGGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSICEIH*ICKGSL
Trigger: GAGTGAACCCTTACAAATGCAGTGAATTTCACAAAT...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR CAA 72 bp ATTGGAGTTAGTTACAGGACAATAGGAAAGGAGTTGTaGACCAGATCACAAGAAACTCAGAGTCATTTGTTA +
Preference number: 4 (lower is better)
Translates to: IGVSYRTIGKEL*TRSQETQSHLL
Trigger: TAACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR CAA 72 bp TTTATTGGAGTTAGTTACAGGACAATAGGAAAGGAGTaGTTGACCAGATCACAAGAAACTCAGAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: FIGVSYRTIGKE*LTRSQETQSHL
Trigger: CAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR TCA 90 bp TTCAGTCTCAATGAAAGTGTTACACAATACTATCTTCTGACTTCCCAACTTGTCTTAAGACGGGATTTGTaGGTAAAGCATTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FSLNESVTQYYLLTSQLVLRRDL*VKHLSH
Trigger: ATGTGACAAATGCTTTACTCACAAATCCCGTCTTAA...GACAAGTTGGGAAGTCAGAAGATAGTATTGTGTAACACTTTCATTGAGACTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR CCA 90 bp TTCAGTCTCAATGAAAGTGTTACACAATACTATCTTCTGACTTCCCAACTTGTCATAAGATGGGATTTGTaGGTAAAGCATTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FSLNESVTQYYLLTSQLVIRWDL*VKHLSH
Trigger: ATGTGACAAATGCTTTACCCACAAATCCCATCTTAT...GACAAGTTGGGAAGTCAGAAGATAGTATTGTGTAACACTTTCATTGAGACTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
3UTR CAA 72 bp GAGTTGTTGACCAGATCACAAGAAACTCAGAGTCATTaGTTATCCTATAATGACAAACAAGCATTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ELLTRSQETQSH*LSYNDKQAFEK
Trigger: CTTCTCAAATGCTTGTTTGTCATTATAGGATAACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR CAA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCGGGCTTAAGTCTTTTTaGGTTCCAGTATTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSGLKSF*VPVLKR
Trigger: TCTCTTCAATACTGGAACCAAAAAAGACTTAAGCCC...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR CAA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCAATTCTCTGCTGAGTTaGAAGTTTTTCTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSNSLLS*KFFSLG
Trigger: ACCCAGAGAGAAAAACTTCAAACTCAGCAGAGAATT...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS-3UTR CAA 90 bp TGGAGCCTCAAGTGTTGCCAGGACACCATGAATAAAACATATGCCACATTTTCCTTTTTGGTTCCAGTATaGAAGAGAGCTGTGATAAGT +
Preference number: 5 (lower is better)
Translates to: WSLKCCQDTMNKTYATFSFLVPV*KRAVIS
Trigger: ACTTATCACAGCTCTCTTCAATACTGGAACCAAAAA...GGAAAATGTGGCATATGTTTTATTCATGGTGTCCTGGCAACACTTGAGGCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS GCA 90 bp TGTACTGGCTGTCTTGATCCAAGACCTTCCTATACTTTCCACGTATaGAATGATTTTCCACAAACAACAGATTGTTGTAATTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: CTGCLDPRPSYTFHV*NDFPQTTDCCNSPT
Trigger: TGTTGGAGAATTACAACAATCTGTTGTTTGTGGAAAATCATTGCATACGTGGAAAGTATAGGAAGGTCTTGGATCAAGACAGCCAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081742.7
ENSMUST00000139784.8
ENSMUST00000143885.8
CDS-3UTR CAA 90 bp GACAATAGGAAAGGAGTTGTTGACCAGATCACAAGAAACTCAGAGTCATTTGTTTTTTGGGTAAAGCATTaGTCACATTCACTACACTTG +
Preference number: 5 (lower is better)
Translates to: DNRKGVVDQITRNSESFVFWVKH*SHSLHL
Trigger: CAAGTGTAGTGAATGTGACAAATGCTTTACCCAAAA...AACAAATGACTCTGAGTTTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000081742.7
CDS TCA 72 bp ATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTaGTCCAAGACCTTCCTATACTTTCCACGTATGCAA +
Preference number: 6 (lower is better)
Translates to: IFMCSWTMYWLS*SKTFLYFPRMQ
Trigger: TTGCATACGTGGAAAGTATAGGAAGGTCTTGGATCAAGACAGCCAGTACATTGTCCATGAACACATGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081742.7
ENSMUST00000139784.8
ENSMUST00000143885.8
CDS GCA 72 bp TGTCTTGATCCAAGACCTTCCTATACTTTCCACGTATaGAATGATTTTCCACAAACAACAGATTGTTGTAAT +
Preference number: 6 (lower is better)
Translates to: CLDPRPSYTFHV*NDFPQTTDCCN
Trigger: ATTACAACAATCTGTTGTTTGTGGAAAATCATTGCATACGTGGAAAGTATAGGAAGGTCTTGGATCAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081742.7
ENSMUST00000139784.8
ENSMUST00000143885.8