RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP984 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078495

Ensembl transcript IDs: ENSMUST00000105734.10, ENSMUST00000122309.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTACTAATTCTCTAGAGTaGAGCCTCAAGTGTTGTCAA +
Preference number: 2 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSTNSLE*SLKCCQ
Trigger: TTGACAACACTTGAGGCTCCACTCTAGAGAATTAGT...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
3UTR-3UTR CCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACACTAATTCTCTAGAGTaGAGCCTCAAGTGTTGTCAA +
Preference number: 2 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHTNSLE*SLKCCQ
Trigger: TTGACAACACTTGAGGCTCCACTCTAGAGAATTAGT...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
3UTR-3UTR TCA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTCTCAGACTGACATGGTaGATATTGTATTTGTCACAT +
Preference number: 2 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSLRLTW*ILYLSH
Trigger: ATGTGACAAATACAATATTCACCATGTCAGTCTGAG...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
3UTR-3UTR TCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACCTCAGACTGACATGGTaGATATTGTATTTGTCACAT +
Preference number: 2 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHLRLTW*ILYLSH
Trigger: ATGTGACAAATACAATATTCACCATGTCAGTCTGAG...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
3UTR-3UTR TCA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTCTTAGATGTTTTCTCTaGCCTCAAATGAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSLRCFL*PQMKSK
Trigger: CTTTGACTTCATTTGAGGTCAGAGAAAACATCTAAG...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
3UTR-3UTR TCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACCTTAGATGTTTTCTCTaGCCTCAAATGAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHLRCFL*PQMKSK
Trigger: CTTTGACTTCATTTGAGGTCAGAGAAAACATCTAAG...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR TCA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTTTCCCATTCCTCCAGTaGGAAGTACAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSFPFLQ*EVQGHV
Trigger: GACGTGGCCTTGTACTTCTCACTGGAGGAATGGGAA...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
CDS-3UTR TCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACTTCCCATTCCTCCAGTaGGAAGTACAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHFPFLQ*EVQGHV
Trigger: GACGTGGCCTTGTACTTCTCACTGGAGGAATGGGAA...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR CCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACTCATGGACAATGTACTaGCTCTCTTCACCCAAGACC +
Preference number: 4 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHSWTMY*LSSPKT
Trigger: GGTCTTGGGTGAAGAGAGCCAGTACATTGTCCATGA...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR TCA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTATGTACAGTGTCCTCTaGGCAAAACTGAGACATTCC +
Preference number: 4 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSMYSVL*AKLRHS
Trigger: GGAATGTCTCAGTTTTGCTCAGAGGACACTGTACAT...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
CDS-3UTR TCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACATGTACAGTGTCCTCTaGGCAAAACTGAGACATTCC +
Preference number: 4 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHMYSVL*AKLRHS
Trigger: GGAATGTCTCAGTTTTGCTCAGAGGACACTGTACAT...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
3UTR CAA 72 bp TTTATTGGAGTTAGTTACAGGACAATAGGAAAGGAGTaGTTGAGCAGATCACAAGAGACTCATACTCAGTTG +
Preference number: 4 (lower is better)
Translates to: FIGVSYRTIGKE*LSRSQETHTQL
Trigger: CAACTGAGTATGAGTCTCTTGTGATCTGCTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
CDS-3UTR GCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACCATACTTTCCATGTATaGAATGATTTTCCACGAACA +
Preference number: 4 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHHTFHV*NDFPRT
Trigger: TGTTCGTGGAAAATCATTGCATACATGGAAAGTATG...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR CCA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACTTAAGATGGGATTTGTaGGTAAAGCATTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHLRWDL*VKHLSH
Trigger: ATGTGACAAATGCTTTACCCACAAATCCCATCTTAA...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR CAA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACCTGCAGGTGGATTCCTaGATTGAGACTAATGGTAGA +
Preference number: 5 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHLQVDS*IETNGR
Trigger: TCTACCATTAGTCTCAATCAAGGAATCCACCTGCAG...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR CAA 90 bp CAAGCATTTGAGAAGAAATATGATTTCTGGATACTCGAAGCACACTTAACATCTAATTCTCTGCTGACTTaGAAGTTTTTCTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: QAFEKKYDFWILEAHLTSNSLLT*KFFSLG
Trigger: ACCCAGAGAGAAAAACTTCAAAGTCAGCAGAGAATT...AGATGTTAAGTGTGCTTCGAGTATCCAGAAATCATATTTCTTCTCAAATGCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105734.10
CDS-3UTR CAA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACAATTCTCTGCTGACTTaGAAGTTTTTCTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHNSLLT*KFFSLG
Trigger: ACCCAGAGAGAAAAACTTCAAAGTCAGCAGAGAATT...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS-3UTR CAA 90 bp ACATTTGAGGGTGAACAAGTAAAAGTTGTCATGAAAGGCTTTCTACATTTTCACGCTAAGATGAGATTTTaGGGTAAAGCATTTGTCACA +
Preference number: 5 (lower is better)
Translates to: TFEGEQVKVVMKGFLHFHAKMRF*GKAFVT
Trigger: TGTGACAAATGCTTTACCCAAAAATCTCATCTTAGC...GTGAAAATGTAGAAAGCCTTTCATGACAACTTTTACTTGTTCACCCTCAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS CAA 90 bp TTCAAGAATCACCTTGATAAGCTTGTCCCATTTAGAAGACTTCTCTaGAATATTCACGTGTTCATGGACAATGTACTGGCTCTCTTCACC +
Preference number: 6 (lower is better)
Translates to: FKNHLDKLVPFRRLL*NIHVFMDNVLALFT
Trigger: GGTGAAGAGAGCCAGTACATTGTCCATGAACACGTGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTATCAAGGTGATTCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS CAA 72 bp CACCTTGATAAGCTTGTCCCATTTAGAAGACTTCTCTaGAATATTCACGTGTTCATGGACAATGTACTGGCT +
Preference number: 6 (lower is better)
Translates to: HLDKLVPFRRLL*NIHVFMDNVLA
Trigger: AGCCAGTACATTGTCCATGAACACGTGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTATCAAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS GCA 72 bp TCTCTTCACCCAAGACCTTCCCATACTTTCCATGTATaGAATGATTTTCCACGAACAAAAGATTGTTGTAAT +
Preference number: 6 (lower is better)
Translates to: SLHPRPSHTFHV*NDFPRTKDCCN
Trigger: ATTACAACAATCTTTTGTTCGTGGAAAATCATTGCATACATGGAAAGTATGGGAAGGTCTTGGGTGAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2
CDS CAA 72 bp ATGGTAGAAAACAAACTTACACTGTTTACAGAGTCATaGTATTTGCAAACTTCTTTAGTGTTCCTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: MVENKLTLFTES*YLQTSLVFLGL
Trigger: TAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTGTAAGTTTGTTTTCTACCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105734.10
ENSMUST00000122309.2