Pregenerated sensors for ZFP983 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035868Ensembl transcript IDs: ENSMUST00000039726.8, ENSMUST00000232827.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGCCAGCTTCTGGCCTCCATGCGCACTATGCAATGTAGTGCAATaGTACAACCACAAAAGCATCTATACACTCACACACACAAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LASFWPPCALCNVVQ*YNHKSIYTLTHTKE Trigger: TTCCTTTGTGTGTGTGAGTGTATAGATGCTTTTGTGGTTGTATCATTGCACTACATTGCATAGTGCGCATGGAGGCCAGAAGCTGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 90 bp | GAAGTAAAGGTCTGCACCACCAAGCCCAGTACTCTTGCCAATTTCTaGTTTGTTTGTGAGCATGCCTGTGATGCTACATGCACAGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: EVKVCTTKPSTLANF*FVCEHACDATCTAY Trigger: ATAAGCTGTGCATGTAGCATCACAGGCATGCTCACAAACAAATCAGAAATTGGCAAGAGTACTGGGCTTGGTGGTGCAGACCTTTACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CCA 90 bp | GACACACTTCTTCCAACAAGGCCACACTTAATAGTCCAATTCCTATaGCCAAGGATTCAAACACATGAATCTCTGAGGGCCACACCTATT | + |
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Preference number: 1 (lower is better) Translates to: DTLLPTRPHLIVQFL*PRIQTHESLRATPI Trigger: AATAGGTGTGGCCCTCAGAGATTCATGTGTTTGAATCCTTGGCCATAGGAATTGGACTATTAAGTGTGGCCTTGTTGGAAGAAGTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 90 bp | TCAATAGTGCAAAATGAATTTCTGTGCACCCTCACTGGTTTTTCTTaGGAGCTGATCTTGAACTCAGAGATCCATTTGTTTCTGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SIVQNEFLCTLTGFS*ELILNSEIHLFLPP Trigger: TGGAGGCAGAAACAAATGGATCTCTGAGTTCAAGATCAGCTCTCAAGAAAAACCAGTGAGGGTGCACAGAAATTCATTTTGCACTATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 90 bp | GTAGAAGGGAGATGCAGGAAGCAAGAATGGATAATAGATTATGGGTaGTATGAAAGAGAGCGAGGATATTGGGAACAGAATTGTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: VEGRCRKQEWIIDYG*YERERGYWEQNCSN Trigger: ATTTGAACAATTCTGTTCCCAATATCCTCGCTCTCTTTCATATCACCCATAATCTATTATCCATTCTTGCTTCCTGCATCTCCCTTCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 90 bp | AAGTTTCTGTTCATTCAAGTAAGACTGCATGTAGAAGCTAGAAATTaGCCAGTAGAAGGGAGATGCAGGAAGCAAGAATGGATAATAGAT | + |
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Preference number: 1 (lower is better) Translates to: KFLFIQVRLHVEARN*PVEGRCRKQEWIID Trigger: ATCTATTATCCATTCTTGCTTCCTGCATCTCCCTTCTACTGGTCAATTTCTAGCTTCTACATGCAGTCTTACTTGAATGAACAGAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 90 bp | GCTGATCTTGAACTCAGAGATCCATTTGTTTCTGCCTCCAGGGTGTaGGAAGTAAAGGTCTGCACCACCAAGCCCAGTACTCTTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: ADLELRDPFVSASRV*EVKVCTTKPSTLAN Trigger: ATTGGCAAGAGTACTGGGCTTGGTGGTGCAGACCTTTACTTCCAACACCCTGGAGGCAGAAACAAATGGATCTCTGAGTTCAAGATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR TCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCAACTCTCCAGCTTGGTaGAAGAAGCCTCCTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: DYLQQDSWRRLSSALGRTNSPAW*KKPPLT Trigger: TGTAAGAGGAGGCTTCTTTCACCAAGCTGGAGAGTT...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGAGAGACCTCATAGATCCATTTGTTTCTaGCTCCAGGGTGTTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RILGGDYLLHWEEPERPHRSICF*LQGVGS Trigger: ACTTCCAACACCCTGGAGGCAGAAACAAATGGATCT...ATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR TCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCGTAGAAGCTAGAAATTaGCCAGTAGAAGGGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: DYLQQDSWRRLSSALGRTVEARN*PVEGRC Trigger: GCATCTCCCTTCTACTGGTCAATTTCTAGCTTCTAC...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAGACATGGTAATAGATGCAATGTAGTGCAATaGTACAACCACAAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: PLSSWQQACHPGGRHGNRCNVVQ*YNHKSI Trigger: GATGCTTTTGTGGTTGTATCATTGCACTACATTGCA...TCTATTACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGAGAGACCTCATAGATTATGGGTGATATaGAAGAGAGCGAGGATATTG | + |
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Preference number: 2 (lower is better) Translates to: RILGGDYLLHWEEPERPHRLWVI*KRARIL Trigger: CAATATCCTCGCTCTCTTTCATATCACCCATAATCT...ATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGAGGTTTAGTCCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCACAAGCCCAGTACTCTTaGCAATTTCTGATTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: FRGLVHYLHGNRHAILEAQAQYS*QFLICL Trigger: CAAACAAATCAGAAATTGGCAAGAGTACTGGGCTTG...TGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGGACTAAACCTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAACCTGAGAGACCTCATAGTCCATCTCCACAGTGACACACTTCTTCCAACAGGATTGGGGAATCAATaGCCCAATTCTCTAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: KNLRDLIVHLHSDTLLPTGLGNQ*PNSLKF Trigger: GAATTTTAGAGAATTGGGGCATTGATTCCCCAATCC...TGTTGGAAGAAGTGTGTCACTGTGGAGATGGACTATGAGGTCTCTCAGGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGTCCCTTAGTCTCTCTTACCTCTTTGAGAGTGACAGGCTGTTAATGACACAAATTCAATGCATTTaGGGGAGGTATAATTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GASLSLSYLFESDRLLMTQIQCI*GRYNSQ Trigger: TTGGGAATTATACCTCCCCCAAATGCATTGAATTTG...TGTCATTAACAGCCTGTCACTCTCAAAGAGGTAAGAGAGACTAAGGGACGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAGGTTTAGTCCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAAGAGAGCGAGGATATTaGGAACAGAATTGTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: FRGLVHYLHGNRHAILEARERGY*EQNCSN Trigger: ATTTGAACAATTCTGTTCCCAATATCCTCGCTCTCT...TGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGGACTAAACCTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCCAAAATGAATTTCTGTaGACCCTCACTGGTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: DYLQQDSWRRLSSALGRTQNEFL*TLTGFS Trigger: AGAAAAACCAGTGAGGGTGCACAGAAATTCATTTTG...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGTTCAAATATGTACTaGAGTAGTGGGGAGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: DYLQQDSWRRLSSALGRTCSNMY*SSGEEK Trigger: TTTTTCCTCCCCACTACTCCAGTACATATTTGAACA...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCATAGTCCAATTCCTATaGCCAAGGATTCAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: DYLQQDSWRRLSSALGRTIVQFL*PRIQTH Trigger: ATGTGTTTGAATCCTTGGCCATAGGAATTGGACTAT...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTAGTGTAGGTCCAAGGACATACCTAATTGAAATTTTGTTAGTGATTCTGTCTGTGCACCCTCACTaGTTTTTCTTGAGAGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LGSVGPRTYLIEILLVILSVHPH*FFLRAD Trigger: ATCAGCTCTCAAGAAAAACCAGTGAGGGTGCACAGA...CAGAATCACTAACAAAATTTCAATTAGGTATGTCCTTGGACCTACACTACCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGCCTGTGATGCTACATGCACAGCTTATATATCTCTTTATAGTTTCTTATAGTGCTGGGATTAAATaGTGCTCACAAACGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: SMPVMLHAQLIYLFIVSYSAGIK*CSQTCM Trigger: CATGCACGTTTGTGAGCACCATTTAATCCCAGCACT...ATAAGAAACTATAAAGAGATATATAAGCTGTGCATGTAGCATCACAGGCATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGCCTGTGATGCTACATGCACAGCTTATATATCTCTTTATAGTTTCTTATTGGTGCTCACAAACGTaGATGGGATTAATAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: SMPVMLHAQLIYLFIVSYWCSQT*MGLIIL Trigger: TAAAATTATTAATCCCATGCACGTTTGTGAGCACCA...ATAAGAAACTATAAAGAGATATATAAGCTGTGCATGTAGCATCACAGGCATGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGCCTGTGATGCTACATGCACAGCTTATATATCTCTTTATAGTTTCTTATCTTTGTCAAATTCAATaGATTTGGGGGAGGTATAAT | + |
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Preference number: 2 (lower is better) Translates to: SMPVMLHAQLIYLFIVSYLCQIQ*IWGRYN Trigger: ATTATACCTCCCCCAAATGCATTGAATTTGACAAAG...ATAAGAAACTATAAAGAGATATATAAGCTGTGCATGTAGCATCACAGGCATGCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CAA 90 bp | AGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGAGAGACCTCATGCTTCAGGGGATTTCTaGCCAGCTTCTGGCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: RILGGDYLLHWEEPERPHASGDF*PASGLH Trigger: ATGGAGGCCAGAAGCTGGCAAGAAATCCCCTGAAGC...ATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CCA 72 bp | GGCTTACAGTTTCAGAGGTTTAGTCCATTATCTTCATaGCAACAGGCATGCCATCCTGGAGGCAGACATGGT | + |
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Preference number: 3 (lower is better) Translates to: GLQFQRFSPLSS*QQACHPGGRHG Trigger: ACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGGACTAAACCTCTGAAACTGTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTGCCTCCAGGGTGTTGGAAGTAAAGGTCTGCACCACCAAGCCCAGTACTCATAACAAGACAACCTaGAATTCACAGGTATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VSASRVLEVKVCTTKPSTHNKTT*NSQVSS Trigger: AGAAGATACCTGTGAATTCAAGGTTGTCTTGTTATG...AGTACTGGGCTTGGTGGTGCAGACCTTTACTTCCAACACCCTGGAGGCAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAGACATGGTAATAGACCTCACTGGTTTTTCTaGAGAGCTGATCTTGAACTC | + |
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Preference number: 3 (lower is better) Translates to: PLSSWQQACHPGGRHGNRPHWFF*RADLEL Trigger: GAGTTCAAGATCAGCTCTCAAGAAAAACCAGTGAGG...TCTATTACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR GCA 72 bp | CAGAGGTTTAGTCCATTATCTTCATGGCAACAGGCATaGCATCCTGGAGGCAGACATGGTAATAGAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: QRFSPLSSWQQA*HPGGRHGNRGV Trigger: AACTCCTCTATTACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGGACTAAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CCA 72 bp | TTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTaGGAAGAACCTGAGAGACCTCATAGTCCATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: FNRILGGDYLLH*EEPERPHSPSP Trigger: TGGAGATGGACTATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR GCA 72 bp | CTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTaGACTGGGAAGAACCTGAGAGACCTCATAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LSSTGFLEETIF*TGKNLRDLIVH Trigger: ATGGACTATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CAA 90 bp | AGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGAGAGACCTCATAAGAGAGCGAGGATATaGGGAACAGAATTGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: RILGGDYLLHWEEPERPHKRARI*GTELFK Trigger: TTTGAACAATTCTGTTCCCAATATCCTCGCTCTCTT...ATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | TTCTGGCCTCCATGCGCACTATGCAATGTAGTGCAATaGTACAACCACAAAAGCATCTATACACTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: FWPPCALCNVVQ*YNHKSIYTLTH Trigger: GTGTGTGAGTGTATAGATGCTTTTGTGGTTGTATCATTGCACTACATTGCATAGTGCGCATGGAGGCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | AATAGTCCAATTCCTATGGCCAAGGATTCAAACACATaGATCTCTGAGGGCCACACCTATTCAAACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: NSPIPMAKDSNT*ISEGHTYSNHH Trigger: GTGGTGGTTTGAATAGGTGTGGCCCTCAGAGATTCATGTGTTTGAATCCTTGGCCATAGGAATTGGACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | GAGATGTCTATAGCCAACCTGTCTCTTGATTGGATTTaGGACCTGCCCATAGAGAGGAATTTATACCATGGT | + |
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Preference number: 3 (lower is better) Translates to: EMSIANLSLDWI*DLPIERNLYHG Trigger: ACCATGGTATAAATTCCTCTCTATGGGCAGGTCTCAAATCCAATCAAGAGACAGGTTGGCTATAGACATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR GCA 72 bp | TCTGCCTCCTGGTCCCTAACAGTCAAACAGCACATTTaGTCTTATATGTGGATCTTAGCTTCAAAGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SASWSLTVKQHI*SYMWILASKFL Trigger: CAGAAACTTTGAAGCTAAGATCCACATATAAGAGCAAATGTGCTGTTTGACTGTTAGGGACCAGGAGGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR-3UTR CAA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCAGTCAAACAGCACATTaGCTCTTATATGTGGATCTT | + |
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Preference number: 3 (lower is better) Translates to: DYLQQDSWRRLSSALGRTSQTAH*LLYVDL Trigger: AAGATCCACATATAAGAGCAAATGTGCTGTTTGACT...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | ACAACCTTGAATTCACAGGTATCTTCTTTCCTTTGTTaGGTGCTGGGATTAAATGGTGCTCACAAACGTGCA | + |
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Preference number: 3 (lower is better) Translates to: TTLNSQVSSFLC*VLGLNGAHKRA Trigger: TGCACGTTTGTGAGCACCATTTAATCCCAGCACTCAACAAAGGAAAGAAGATACCTGTGAATTCAAGGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | CTACCTGTCCTTGAGTTGTCCATAACAAGACAACCTTaGATTCACAGGTATCTTCTTTCCTTTGTTGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LPVLELSITRQP*IHRYLLSFVEC Trigger: GCACTCAACAAAGGAAAGAAGATACCTGTGAATTCAAGGTTGTCTTGTTATGGACAACTCAAGGACAGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR TCA 72 bp | AGATGCAGGAAGCAAGAATGGATAATAGATTATGGGTaGTATGAAAGAGAGCGAGGATATTGGGAACAGAAT | + |
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Preference number: 3 (lower is better) Translates to: RCRKQEWIIDYG*YERERGYWEQN Trigger: ATTCTGTTCCCAATATCCTCGCTCTCTTTCATATCACCCATAATCTATTATCCATTCTTGCTTCCTGCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CCA 72 bp | GGTATCTTCTTTCCTTTGTTGAGTGCTGGGATTAAATaGTGCTCACAAACGTGCATGGGATTAATAATTTTA | + |
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Preference number: 3 (lower is better) Translates to: GIFFPLLSAGIK*CSQTCMGLIIL Trigger: TAAAATTATTAATCCCATGCACGTTTGTGAGCACCATTTAATCCCAGCACTCAACAAAGGAAAGAAGATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR GCA 72 bp | ATCTTCTTTCCTTTGTTGAGTGCTGGGATTAAATGGTaGTCACAAACGTGCATGGGATTAATAATTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: IFFPLLSAGIKW*SQTCMGLIILL Trigger: TAATAAAATTATTAATCCCATGCACGTTTGTGAGCACCATTTAATCCCAGCACTCAACAAAGGAAAGAAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | AGGGGATTTCTTGCCAGCTTCTGGCCTCCATGCGCACTATGCAATGTAGTGCAAGCCTTGAGGAGGTACTaGAACATTTACCGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: RGFLASFWPPCALCNVVQALRRY*NIYRIS Trigger: GGAAATGCGGTAAATGTTTCAGTACCTCCTCAAGGC...TTGCACTACATTGCATAGTGCGCATGGAGGCCAGAAGCTGGCAAGAAATCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | CAGAAGGCCAGGAGGAGACTATCTTCAACAGGATTCTaGGAGGAGACTATCTTCTGCACTGGGAAGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: QKARRRLSSTGF*EETIFCTGKNL Trigger: CAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTCTCCTCCTGGCCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | ACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTaGCCAGCTTCTGGCCTCCATGCGCACTATGCAATG | + |
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Preference number: 4 (lower is better) Translates to: TQMSLTPASGDF*PASGLHAHYAM Trigger: CATTGCATAGTGCGCATGGAGGCCAGAAGCTGGCAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | GTTTCTGCCTCCAGGGTGTTGGAAGTAAAGGTCTGCACCACCAAGCCCAGTACTCTAAAACTGGAAGAGTaGGCAAAGGATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: VSASRVLEVKVCTTKPSTLKLEE*AKDLSH Trigger: ATGTGACAAATCCTTTGCCCACTCTTCCAGTTTTAG...AGTACTGGGCTTGGTGGTGCAGACCTTTACTTCCAACACCCTGGAGGCAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | GTTTCTGCCTCCAGGGTGTTGGAAGTAAAGGTCTGCACCACCAAGCCCAGTACTTGTTCCTCAGAAGTATaGATTTTCTGGTGTGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: VSASRVLEVKVCTTKPSTCSSEV*IFWCVL Trigger: TAGGACACACCAGAAAATCCATACTTCTGAGGAACA...AGTACTGGGCTTGGTGGTGCAGACCTTTACTTCCAACACCCTGGAGGCAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | TTCAGAGGTTTAGTCCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAGAACAGTATCACATGTaGAATAGTTCTCGACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRGLVHYLHGNRHAILEAEQYHM*NSSRQR Trigger: TCTCTGTCGAGAACTATTCCACATGTGATACTGTTC...TGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGGACTAAACCTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR GCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCATAGTGGGTAAAGGATaGGTCACACTCATTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: DYLQQDSWRRLSSALGRTIVGKG*VTLIAF Trigger: AAATGCAATGAGTGTGACGCATCCTTTACCCACTAT...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | CCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAGACATGGTAATAGAAATGTCAACAGACACTaGGACATGTTTACTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: PLSSWQQACHPGGRHGNRNVNRH*DMFTGK Trigger: TTTTCCAGTAAACATGTCCCAGTGTCTGTTGACATT...TCTATTACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | GACAACCTTGAATTCACAGGTATCTTCTTTCCTTTGTaGAGTGCTGGGATTAAATGGTGCTCACAAACGTGC | + |
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Preference number: 4 (lower is better) Translates to: DNLEFTGIFFPL*SAGIKWCSQTC Trigger: GCACGTTTGTGAGCACCATTTAATCCCAGCACTCAACAAAGGAAAGAAGATACCTGTGAATTCAAGGTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR GCA 90 bp | CCATTATCTTCATGGCAACAGGCATGCCATCCTGGAGGCAGACATGGTAATAGAGTATGGGTTCTGGAATaGCTTTTAAGATGTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: PLSSWQQACHPGGRHGNRVWVLE*LLRCDN Trigger: ATTATCACATCTTAAAAGGCATTCCAGAACCCATAC...TCTATTACCATGTCTGCCTCCAGGATGGCATGCCTGTTGCCATGAAGATAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | CAAGACAACCTTGAATTCACAGGTATCTTCTTTCCTTaGTTGAGTGCTGGGATTAAATGGTGCTCACAAACG | + |
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Preference number: 4 (lower is better) Translates to: QDNLEFTGIFFP*LSAGIKWCSQT Trigger: CGTTTGTGAGCACCATTTAATCCCAGCACTCAACAAAGGAAAGAAGATACCTGTGAATTCAAGGTTGTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | TTCTGCCTCCTGGTCCCTAACAGTCAAACAGCACATTaGCTCTTATATGTGGATCTTAGCTTCAAAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FCLLVPNSQTAH*LLYVDLSFKVS Trigger: AGAAACTTTGAAGCTAAGATCCACATATAAGAGCAAATGTGCTGTTTGACTGTTAGGGACCAGGAGGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGGGAGGTATAATTCCCAATGAAGAGCAAGACATGGAACTATATATGGTATTCCCTGCCACATTCTaGACAACTACAATGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FGGGIIPNEEQDMELYMVFPATF*TTTMFL Trigger: GAGGAACATTGTAGTTGTTCAGAATGTGGCAGGGAA...TACCATATATAGTTCCATGTCTTGCTCTTCATTGGGAATTATACCTCCCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | GACTATCTTCAACAGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTCCTTACAGCATCTGTaGTTATTAGAAGTTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: DYLQQDSWRRLSSALGRTSLQHL*LLEVSV Trigger: TACAGAAACTTCTAATAACCACAGATGCTGTAAGGA...GGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCTGTTGAAGATAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR GCA 90 bp | CTAAAATTCCCAAAGACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTTGACCTCTTTTATAAAGTaGATCATGGGAGGGATCACG | + |
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Preference number: 4 (lower is better) Translates to: LKFPKTQMSLTPASGDFLTSFIK*IMGGIT Trigger: CGTGATCCCTCCCATGATGCACTTTATAAAAGAGGT...CAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGTCTTTGGGAATTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGGGAGGTATAATTCCCAATGAAGAGCAAGACATGGAACTATATATGGTATTTCCCACACTCATGTaGTTTCTCTTCAAGGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: FGGGIIPNEEQDMELYMVFPTLM*FLFKVN Trigger: GTTTACCTTGAAGAGAAATCACATGAGTGTGGGAAA...TACCATATATAGTTCCATGTCTTGCTCTTCATTGGGAATTATACCTCCCCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR GCA 90 bp | TCTAAAATTCCCAAAGACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTTGCTGATGAAATTCCCTaGCACATTCTGAACAACTAC | + |
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Preference number: 4 (lower is better) Translates to: SKIPKDTNVFNSSFRGFLADEIP*HILNNY Trigger: GTAGTTGTTCAGAATGTGGCAGGGAATTTCATCAGC...AAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGTCTTTGGGAATTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CCA 90 bp | TCTAAAATTCCCAAAGACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTTGGCTTTTCACCAGTATaGGTTCTGGAATGCCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SKIPKDTNVFNSSFRGFLGFSPV*VLECLL Trigger: TAAAAGGCATTCCAGAACCCATACTGGTGAAAAGCC...AAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGTCTTTGGGAATTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGGGAGGTATAATTCCCAATGAAGAGCAAGACATGGAACTATATATGGTAATGTTTAATGAGCCTTaGGGAGGTACTGAAACATTT | + |
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Preference number: 4 (lower is better) Translates to: FGGGIIPNEEQDMELYMVMFNEP*GGTETF Trigger: AAATGTTTCAGTACCTCCTCAAGGCTCATTAAACAT...TACCATATATAGTTCCATGTCTTGCTCTTCATTGGGAATTATACCTCCCCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | TTTGGGGGAGGTATAATTCCCAATGAAGAGCAAGACATGGAACTATATATGGTACACAAATGTCACACTTaGAAGGTTTGTTTCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: FGGGIIPNEEQDMELYMVHKCHT*KVCFQY Trigger: ATACTGGAAACAAACCTTTCAAGTGTGACATTTGTG...TACCATATATAGTTCCATGTCTTGCTCTTCATTGGGAATTATACCTCCCCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR TCA 90 bp | AGCATGCCTGTGATGCTACATGCACAGCTTATATATCTCTTTATAGTTTCTTATCCAGTATGCATTTTCTaGTGGCTTTTAAGTACGGAG | + |
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Preference number: 4 (lower is better) Translates to: SMPVMLHAQLIYLFIVSYPVCIF*WLLSTE Trigger: CTCCGTACTTAAAAGCCATCAGAAAATGCATACTGG...ATAAGAAACTATAAAGAGATATATAAGCTGTGCATGTAGCATCACAGGCATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| 3UTR CAA 72 bp | GGTAGTGTAGGTCCAAGGACATACCTAATTGAAATTTaGTTAGTGATTCTGCTGTTAATTTGGCATCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSVGPRTYLIEI*LVILLLIWHLN Trigger: ATTTAGATGCCAAATTAACAGCAGAATCACTAACAAAATTTCAATTAGGTATGTCCTTGGACCTACACTACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | AGGGGATTTCTTGCCAGCTTCTGGCCTCCATGCGCACTATGCAATGTAGTGCAATCACAAATGTCACACTaGAAAGGTTTGTTTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RGFLASFWPPCALCNVVQSQMSH*KGLFPV Trigger: TACTGGAAACAAACCTTTCAAGTGTGACATTTGTGA...TTGCACTACATTGCATAGTGCGCATGGAGGCCAGAAGCTGGCAAGAAATCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | AAGAACCTGAGAGACCTCATAGTCCATCTCCACAGTGACACACTTCTTCCAACACTGACAAGACTCCTTTaGAGTCTTCACATGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: KNLRDLIVHLHSDTLLPTLTRLL*SLHMLM Trigger: CATCAACATGTGAAGACTCAAAAGGAGTCTTGTCAG...TGTTGGAAGAAGTGTGTCACTGTGGAGATGGACTATGAGGTCTCTCAGGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | AGGATTCTTGGAGGAGACTATCTTCTGCACTGGGAAGAACCTGAGAGACCTCATTTCACAGAAAAGGATTaGTCACACACCTCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: RILGGDYLLHWEEPERPHFTEKD*SHTSHL Trigger: CAAATGTGAGGTGTGTGACAAATCCTTTTCTGTGAA...ATGAGGTCTCTCAGGTTCTTCCCAGTGCAGAAGATAGTCTCCTCCAAGAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS CCA 90 bp | CCACATTCTGAACAACTACAATGTTCCTCAGAAGTATGGATTTTCTaGTGTGTCCTAAAACTGGAAGAGTGGGCAAAGGATTTGTCACAT | + |
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Preference number: 5 (lower is better) Translates to: PHSEQLQCSSEVWIF*CVLKLEEWAKDLSH Trigger: ATGTGACAAATCCTTTGCCCACTCTTCCAGTTTTAGGACACACCAGAAAATCCATACTTCTGAGGAACATTGTAGTTGTTCAGAATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039726.8 ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | TTTGGGGGAGGTATAATTCCCAATGAAGAGCAAGACATGGAACTATATATGGTAGAGTGGGCAAAGGATTaGTCACATTGCTTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: FGGGIIPNEEQDMELYMVEWAKD*SHCLHL Trigger: CAAATGTAAGCAATGTGACAAATCCTTTGCCCACTC...TACCATATATAGTTCCATGTCTTGCTCTTCATTGGGAATTATACCTCCCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | CTAAAATTCCCAAAGACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTTGTTGAGTCTTCACATGTaGATGAACAGTATCACATGT | + |
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Preference number: 5 (lower is better) Translates to: LKFPKTQMSLTPASGDFLLSLHM*MNSITC Trigger: ACATGTGATACTGTTCATCAACATGTGAAGACTCAA...CAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGTCTTTGGGAATTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | CTAAAATTCCCAAAGACACAAATGTCTTTAACTCCAGCTTCAGGGGATTTCTTGGTAGAGTCTTTTATCTaGAATAATGCTGGAACACAC | + |
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Preference number: 5 (lower is better) Translates to: LKFPKTQMSLTPASGDFLVESFI*NNAGTH Trigger: GTGTGTTCCAGCATTATTCAAGATAAAAGACTCTAC...CAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTTGTGTCTTTGGGAATTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCCTGTGATGCTACATGCACAGCTTATATATCTCTTTATAGTTTCTTATTATGTCTGCATTGGTTaGATGAGTCAACAGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SMPVMLHAQLIYLFIVSYYVCIG*MSQQRN Trigger: ATTCCTCTGTTGACTCATCAAACCAATGCAGACATA...ATAAGAAACTATAAAGAGATATATAAGCTGTGCATGTAGCATCACAGGCATGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232827.2 |
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| CDS CCA 72 bp | GAACAACTACAATGTTCCTCAGAAGTATGGATTTTCTaGTGTGTCCTAAAACTGGAAGAGTGGGCAAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EQLQCSSEVWIF*CVLKLEEWAKD Trigger: ATCCTTTGCCCACTCTTCCAGTTTTAGGACACACCAGAAAATCCATACTTCTGAGGAACATTGTAGTTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039726.8 ENSMUST00000232827.2 |
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| CDS GCA 72 bp | ATTAGAAGTTTCTGTAGTGTCACCTCTTTTATAAAGTaGATCATGGGAGGGATCACGAAGCATTTCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: IRSFCSVTSFIK*IMGGITKHFTK Trigger: CTTGGTGAAATGCTTCGTGATCCCTCCCATGATGCACTTTATAAAAGAGGTGACACTACAGAAACTTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039726.8 ENSMUST00000232827.2 |
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| CDS CCA 72 bp | TTTGAGTCTTCACATGTTGATGAACAGTATCACATGTaGAATAGTTCTCGACAGAGACCAGGTTGCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: FESSHVDEQYHM*NSSRQRPGCCN Trigger: ATTACAGCAACCTGGTCTCTGTCGAGAACTATTCCACATGTGATACTGTTCATCAACATGTGAAGACTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039726.8 ENSMUST00000232827.2 |
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