Pregenerated sensors for ZFP982 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078496Ensembl transcript IDs: ENSMUST00000105721.9
Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | ATGAATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACACTAAGATGGGATTTTTaGGGAAAGCACTTGTCACAT | + |
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Preference number: 3 (lower is better) Translates to: MNFLMPSQFAFFSKAFVTLRWDF*GKHLSH Trigger: ATGTGACAAGTGCTTTCCCAAAAAATCCCATCTTAG...TGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR TCA 90 bp | AATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACAGTCCCACGGCCACATCCTTaGAGGTTAACAGACCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFLMPSQFAFFSKAFVTVPRPHP*RLTDPV Trigger: CACAGGGTCTGTTAACCTTCAAGGATGTGGCCGTGG...GACTGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR CCA 90 bp | ATGAATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACATCATGGACAATGTACTaGCTGTCTTCATCCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MNFLMPSQFAFFSKAFVTSWTMY*LSSSKA Trigger: GGCCTTGGATGAAGACAGCCAGTACATTGTCCATGA...TGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR GCA 90 bp | TGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACAGTCACTACATTTGGGCCTTCCCACACTTTaGACATATGAAATGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: CLLSLRFSVKHLSQSLHLGLPTL*TYEMIF Trigger: GAAAATCATTTCATATGTGCAAAGTGTGGGAAGGCC...CAAATGTAGTGACTGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR CCA 90 bp | AATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACAGTCCTAAGATGGGATCTTTaGGAAAAGCATTTGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NFLMPSQFAFFSKAFVTVLRWDL*EKHLSH Trigger: ATGGGACAAATGCTTTTCCCAAAGATCCCATCTTAG...GACTGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR CAA 90 bp | AATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACAGTCACTAAGATGGGATCTTaGGGAAAAGCATTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NFLMPSQFAFFSKAFVTVTKMGS*GKAFVP Trigger: TGGGACAAATGCTTTTCCCAAAGATCCCATCTTAGT...GACTGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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| CDS-3UTR CAA 90 bp | ATGAATTTTCTGATGCCTTCTCAGTTTGCGTTTTTCAGTAAAGCATTTGTCACACTTCTCAGACTGCCTTaGTCAGTAAAGCATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: MNFLMPSQFAFFSKAFVTLLRLP*SVKHFS Trigger: TGAGAAATGCTTTACTGACAAAGGCAGTCTGAGAAG...TGTGACAAATGCTTTACTGAAAAACGCAAACTGAGAAGGCATCAGAAAATTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105721.9 |
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