Pregenerated sensors for ZFP979 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066000Ensembl transcript IDs: ENSMUST00000037565.14, ENSMUST00000105720.8, ENSMUST00000133006.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAATATTGGATAAGGAAATaGAGTCTTGGGGTTCACTTT | + |
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Preference number: 2 (lower is better) Translates to: ELLTRTKGGHKSVVILKQYWIRK*SLGVHF Trigger: AAAGTGAACCCCAAGACTGCATTTCCTTATCCAATA...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAAAAGGAAATGCAGTCTTaGGGTTCACTTTGTCAAATA | + |
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Preference number: 2 (lower is better) Translates to: ELLTRTKGGHKSVVILKQKEMQS*GSLCQI Trigger: TATTTGACAAAGTGAACCCCAAGACTGCATTTCCTT...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| 3UTR CCA 72 bp | ACTCAAAGCAAACTTCACATCTGTAGGTATAAATATTaGATAAGGAAATGCAGTCTTGGGGTTCACTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: TQSKLHICRYKY*IRKCSLGVHFV Trigger: GACAAAGTGAACCCCAAGACTGCATTTCCTTATCCAATATTTATACCTACAGATGTGAAGTTTGCTTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGCGCAGACTAACTTGGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: TISYTEVVVMHLSHIQHSRRLTW*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACCAAGTTAGTCTGCG...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAACGCAGACTAACTTGGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ELLTRTKGGHKSVVILKQRRLTW*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACCAAGTTAGTCTGCG...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR GCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAATGCTCATTGAAAATGTaGTGTGTGTCTTGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ELLTRTKGGHKSVVILKQCSLKM*CVSCSK Trigger: CTTGGAACAAGACACACAGCACATTTTCAATGAGCA...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAACTCAGACTAACTTGGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ELLTRTKGGHKSVVILKQLRLTW*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACCAAGTTAGTCTGAG...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGCTCAGACTAACTTGGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: TISYTEVVVMHLSHIQHSLRLTW*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACCAAGTTAGTCTGAG...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGATACGCAGACTAACTTaGTGGGTAAAGCATTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TISYTEVVVMHLSHIQHSIRRLT*WVKHLS Trigger: TGACAAATGCTTTACCCACCAAGTTAGTCTGCGTAT...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAAATACGCAGACTAACTTaGTGGGTAAAGCATTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ELLTRTKGGHKSVVILKQIRRLT*WVKHLS Trigger: TGACAAATGCTTTACCCACCAAGTTAGTCTGCGTAT...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAAATACTCAGACTAACTTaGTGGGTAAAGCATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLTRTKGGHKSVVILKQILRLT*WVKHLS Trigger: TGACAAATGCTTTACCCACCAAGTTAGTCTGAGTAT...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS GCA 90 bp | TTGTTAGACTCATTACATTTAAAAGACTTCTCTTGGATATGCCCATaGTCATTGAAAATGTGCTGTGTGTCTTGTTCCAAGACCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLDSLHLKDFSWICP*SLKMCCVSCSKTFS Trigger: GGAGAAGGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS-3UTR CAA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGATATGCCCATGCTCATaGAAAATGTGCTGTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: TISYTEVVVMHLSHIQHSICPCS*KMCCVS Trigger: AGACACACAGCACATTTTCAATGAGCATGGGCATAT...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CAA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAAAATTCTCTGCTGACTTaGAAGATTGTCACTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: ELLTRTKGGHKSVVILKQNSLLT*KIVTLS Trigger: ACTCAGAGTGACAATCTTCAAAGTCAGCAGAGAATT...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CAA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGTGGTGGGTAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: TISYTEVVVMHLSHIQHSWWVKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTACCCACCA...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS GCA 90 bp | ATTATATTGTTAGACTCATTACATTTAAAAGACTTCTCTTGGATATaGCCATGCTCATTGAAAATGTGCTGTGTGTCTTGTTCCAAGACC | + |
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Preference number: 5 (lower is better) Translates to: IILLDSLHLKDFSWI*PCSLKMCCVSCSKT Trigger: GGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAACAATATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS-3UTR CAA 90 bp | GAGTTGTTGACTAGAACAAAAGGGGGTCATAAATCAGTTGTTATCTTGAAACAATTTAAAAGACTTCTCTaGGATATGCCCATGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: ELLTRTKGGHKSVVILKQFKRLL*DMPMLI Trigger: AATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAA...TTGTTTCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS-3UTR CAA 90 bp | ACAATTTCTTACACTGAGGTTGTGGTAATGCATTTGTCACATATACAACATTCGGTGTTCATTTCACTATaGTTTTGTCTCACAATGGGT | + |
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Preference number: 5 (lower is better) Translates to: TISYTEVVVMHLSHIQHSVFISL*FCLTMG Trigger: ACCCATTGTGAGACAAAACAATAGTGAAATGAACAC...CGAATGTTGTATATGTGACAAATGCATTACCACAACCTCAGTGTAAGAAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS CAA 90 bp | CTTCTCTTGGATATGCCCATGCTCATTGAAAATGTGCTGTGTGTCTaGTTCCAAGACCTTCTCCTTCTCATAGTTTCCACATATGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLLDMPMLIENVLCV*FQDLLLLIVSTYAV Trigger: CACTGCATATGTGGAAACTATGAGAAGGAGAAGGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS CAA 72 bp | GATATGCCCATGCTCATTGAAAATGTGCTGTGTGTCTaGTTCCAAGACCTTCTCCTTCTCATAGTTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: DMPMLIENVLCV*FQDLLLLIVST Trigger: TGTGGAAACTATGAGAAGGAGAAGGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS CAA 90 bp | GACTCATTACATTTAAAAGACTTCTCTTGGATATGCCCATGCTCATaGAAAATGTGCTGTGTGTCTTGTTCCAAGACCTTCTCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: DSLHLKDFSWICPCS*KMCCVSCSKTFSFS Trigger: TGAGAAGGAGAAGGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS TCA 72 bp | TTTCTGTTGTGTTCTTTCTTCTCTATGTGGGTTCCTTaGTTGAGACTAATGGTAGAAGACACCTTTAAACGG | + |
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Preference number: 6 (lower is better) Translates to: FLLCSFFSMWVP*LRLMVEDTFKR Trigger: CCGTTTAAAGGTGTCTTCTACCATTAGTCTCAATCAAGGAACCCACATAGAGAAGAAAGAACACAACAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 |
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| CDS GCA 72 bp | GTTCCAAGACCTTCTCCTTCTCATAGTTTCCACATATaGAGTGATTTTCCACAAACAACAGATTGTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: VPRPSPSHSFHI*SDFPQTTDCCN Trigger: ATTACAACAATCTGTTGTTTGTGGAAAATCACTGCATATGTGGAAACTATGAGAAGGAGAAGGTCTTGGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS GCA 72 bp | TCATTACATTTAAAAGACTTCTCTTGGATATGCCCATaGTCATTGAAAATGTGCTGTGTGTCTTGTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLHLKDFSWICP*SLKMCCVSCSK Trigger: CTTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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| CDS CCA 72 bp | ATATTGTTAGACTCATTACATTTAAAAGACTTCTCTTaGATATGCCCATGCTCATTGAAAATGTGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILLDSLHLKDFS*ICPCSLKMCCV Trigger: CACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAACAATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037565.14 ENSMUST00000105720.8 ENSMUST00000133006.2 |
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