Pregenerated sensors for ZFP978 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078497

Ensembl transcript IDs: ENSMUST00000133078.8, ENSMUST00000154154.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TTGCTAGACTCATTACATTTAAAAGACTTCTCTTGGATATGCCCATaGTCATTGAAAATGTGCTGTGTGTCTTGTTCCACGACCTTCTCC	+
Preference number: 5 (lower is better) Translates to: LLDSLHLKDFSWICP*SLKMCCVSCSTTFS Trigger: GGAGAAGGTCGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154154.2
CDS GCA 90 bp	ATTATATTGCTAGACTCATTACATTTAAAAGACTTCTCTTGGATATaGCCATGCTCATTGAAAATGTGCTGTGTGTCTTGTTCCACGACC	+
Preference number: 5 (lower is better) Translates to: IILLDSLHLKDFSWI*PCSLKMCCVSCSTT Trigger: GGTCGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAGCAATATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154154.2
CDS GCA 72 bp	GACTTCTCTTGGATATGCCCATGCTCATTGAAAATGTaGTGTGTGTCTTGTTCCACGACCTTCTCCTTCTCA	+
Preference number: 6 (lower is better) Translates to: DFSWICPCSLKM*CVSCSTTFSFS Trigger: TGAGAAGGAGAAGGTCGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154154.2
CDS CAA 72 bp	GATATGCCCATGCTCATTGAAAATGTGCTGTGTGTCTaGTTCCACGACCTTCTCCTTCTCATAGTTTCCACA	+
Preference number: 6 (lower is better) Translates to: DMPMLIENVLCV*FHDLLLLIVST Trigger: TGTGGAAACTATGAGAAGGAGAAGGTCGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133078.8 ENSMUST00000154154.2
CDS CAA 90 bp	GACTCATTACATTTAAAAGACTTCTCTTGGATATGCCCATGCTCATaGAAAATGTGCTGTGTGTCTTGTTCCACGACCTTCTCCTTCTCA	+
Preference number: 6 (lower is better) Translates to: DSLHLKDFSWICPCS*KMCCVSCSTTFSFS Trigger: TGAGAAGGAGAAGGTCGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154154.2
CDS GCA 72 bp	GTTCCACGACCTTCTCCTTCTCATAGTTTCCACATATaGAGTGATTTTCCACAAACAACAGATTGTTGTAAT	+
Preference number: 6 (lower is better) Translates to: VPRPSPSHSFHI*SDFPQTTDCCN Trigger: ATTACAACAATCTGTTGTTTGTGGAAAATCACTGCATATGTGGAAACTATGAGAAGGAGAAGGTCGTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133078.8 ENSMUST00000154154.2
CDS GCA 72 bp	TCATTACATTTAAAAGACTTCTCTTGGATATGCCCATaGTCATTGAAAATGTGCTGTGTGTCTTGTTCCACG	+
Preference number: 6 (lower is better) Translates to: SLHLKDFSWICP*SLKMCCVSCST Trigger: CGTGGAACAAGACACACAGCACATTTTCAATGAGCATGGGCATATCCAAGAGAAGTCTTTTAAATGTAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154154.2
CDS CAA 72 bp	TTCACCACAAGTGTAAGTGTTCATCTCACTATTGTTTaGTCTCACAATGGGTTTATGTTTAGAAACCAAAAC	+
Preference number: 6 (lower is better) Translates to: FTTSVSVHLTIV*SHNGFMFRNQN Trigger: GTTTTGGTTTCTAAACATAAACCCATTGTGAGACAAAACAATAGTGAGATGAACACTTACACTTGTGGTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154154.2

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