Pregenerated sensors for ZFP977 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092335Ensembl transcript IDs: ENSMUST00000173283.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 90 bp | GGGTTTCTGTGCAGTGTCTGTTCTTTTATTTATTTGGAGAGTACTTaGACACGCAAGCACTTTACTATGTTGAAAGACTTCAGAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GFLCSVCSFIYLEST*TRKHFTMLKDFRVS Trigger: AGACACTCTGAAGTCTTTCAACATAGTAAAGTGCTTGCGTGTCAAAGTACTCTCCAAATAAATAAAAGAACAGACACTGCACAGAAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173283.2 |
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| CDS CAA 72 bp | ACTATGTTGAAAGACTTCAGAGTGTCTGTCTCTAGTTaGGTTTCTTTCAAGCTTTTGAAGATGACTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TMLKDFRVSVSS*VSFKLLKMTET Trigger: TGTCTCAGTCATCTTCAAAAGCTTGAAAGAAACCAAACTAGAGACAGACACTCTGAAGTCTTTCAACATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173283.2 |
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| CDS CAA 90 bp | AAAGACTTCAGAGTGTCTGTCTCTAGTTTGGTTTCTTTCAAGCTTTaGAAGATGACTGAGACATTTGAAGGATTTATCCCATTGTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: KDFRVSVSSLVSFKL*KMTETFEGFIPLCI Trigger: TATGCACAATGGGATAAATCCTTCAAATGTCTCAGTCATCTTCAAAAGCTTGAAAGAAACCAAACTAGAGACAGACACTCTGAAGTCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173283.2 |
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| CDS CAA 90 bp | AAGCACTTTACTATGTTGAAAGACTTCAGAGTGTCTGTCTCTAGTTaGGTTTCTTTCAAGCTTTTGAAGATGACTGAGACATTTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KHFTMLKDFRVSVSS*VSFKLLKMTETFEG Trigger: TCCTTCAAATGTCTCAGTCATCTTCAAAAGCTTGAAAGAAACCAAACTAGAGACAGACACTCTGAAGTCTTTCAACATAGTAAAGTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173283.2 |
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