Pregenerated sensors for ZFP973 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078879Ensembl transcript IDs: ENSMUST00000108985.9, ENSMUST00000141122.2
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCACACAGAAACTCTCATGATCGCTGAGTTACAGAAAGGAGCTTaGAAGCTTGACCTGGAAGAGCCGCCTCCTCTTCTGACTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: HHTETLMIAELQKGA*KLDLEEPPPLLTGR Trigger: CCTGCCAGTCAGAAGAGGAGGCGGCTCTTCCAGGTCAAGCTTGCAAGCTCCTTTCTGTAACTCAGCGATCATGAGAGTTTCTGTGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGTAGAGTCACGCAGAACACATCACACAGAAACTCTCATGATCGCTGAGAGGAGCTTGCAAGCTTaGCCTGGAAGAGCCGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HPVESRRTHHTETLMIAERSLQA*PGRAAS Trigger: GGAGGCGGCTCTTCCAGGTCAAGCTTGCAAGCTCCT...CTCAGCGATCATGAGAGTTTCTGTGTGATGTGTTCTGCGTGACTCTACTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATCCAGCGAAGACACTTCTCTCACAACACCCAGTAGAGTCACGCAGAACCTTGCAAGCTTGACCTaGAAGAGCCGCCTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TASSEDTSLTTPSRVTQNLASLT*KSRLLF Trigger: GAAGAGGAGGCGGCTCTTCCAGGTCAAGCTTGCAAG...GTTCTGCGTGACTCTACTGGGTGTTGTGAGAGAAGTGTCTTCGCTGGATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGCGAAGACACTTCTCTCACAACACCCAGTAGAGTCACGCAGAACACATGCCTCCTCTTCTGACTaGCAGGTCCATGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HPAKTLLSQHPVESRRTHASSSD*QVHVEV Trigger: AACCTCCACATGGACCTGCCAGTCAGAAGAGGAGGC...ATGTGTTCTGCGTGACTCTACTGGGTGTTGTGAGAGAAGTGTCTTCGCTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTACCACATTGCTTGTTCGCTTATGGATTTaGAGAGTACCGCTTTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLMDLESTAMCKGFTTLLVRLWI*RVPLCA Trigger: TGCACAAAGCGGTACTCTCCAAATCCATAAGCGAAC...AAGCAATGTGGTAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| 3UTR TCA 72 bp | CTTGCAAGCTTGACCTGGAAGAGCCGCCTCCTCTTCTaGCTGGCAGGTCCATGTGGAGGTTCTGATTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: LASLTWKSRLLF*LAGPCGGSDWL Trigger: TAGCCAATCAGAACCTCCACATGGACCTGCCAGTCAGAAGAGGAGGCGGCTCTTCCAGGTCAAGCTTGCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR GCA 72 bp | GAAACTCTCATGATCGCTGAGTTACAGAAAGGAGCTTaGAAGCTTGACCTGGAAGAGCCGCCTCCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: ETLMIAELQKGA*KLDLEEPPPLL Trigger: CAGAAGAGGAGGCGGCTCTTCCAGGTCAAGCTTGCAAGCTCCTTTCTGTAACTCAGCGATCATGAGAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| 3UTR TCA 72 bp | CCTCCTCTTCTGACTGGCAGGTCCATGTGGAGGTTCTaGTTGGCTATTGAGTCTCATAGTCATCCAGAATCA | + |
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Preference number: 3 (lower is better) Translates to: PPLLTGRSMWRF*LAIESHSHPES Trigger: TGATTCTGGATGACTATGAGACTCAATAGCCAATCAGAACCTCCACATGGACCTGCCAGTCAGAAGAGGAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141122.2 |
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| CDS-3UTR GCA 90 bp | TTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTACCACATTGCTCTCAGAGTGTTGCTCTaGAGAAGAACGTCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: FAYGFGEYCYVQRLYHIALRVLL*RRTSFM Trigger: CATGAAAGACGTTCTTCTGCAGAGCAACACTCTGAG...AGCAATGTGGTAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | TCCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTGAGAGTACTGCTTTCTaGAAAGGCTTTACCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: SCMCSLMDLESTAMCKGFESTAF*KGFTTV Trigger: CACTGTGGTAAAGCCTTTGCAGAAAGCAGTACTCTC...AAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | CCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTAGAGAGTACTGCTTCGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: PVCVRLWIWRVLLCAKALESTAS*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACGAAGCAGTACTCTC...TAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | CCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTAGAGAGTACCGCTTTGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: PVCVRLWIWRVLLCAKALESTAL*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACAAAGCGGTACTCTC...TAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | CCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTAACTACGACTCTGATATaGAAAGGCTTTACCACATGG | + |
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Preference number: 4 (lower is better) Translates to: PVCVRLWIWRVLLCAKALTTTLI*KGFTTW Trigger: CCATGTGGTAAAGCCTTTGCATATCAGAGTCGTAGT...TAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | GCTTATGGATTTGGAGAGTACCGCTTTGTGCAAAGGCTTTACCACATTGCTTACTCTCCTGTATGTGTTTaGTTATGGGTTTGGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: AYGFGEYRFVQRLYHIAYSPVCV*LWVWRV Trigger: TACTCTCCAAACCCATAAGCAAACACATACAGGAGA...GTAAGCAATGTGGTAAAGCCTTTGCACAAAGCGGTACTCTCCAAATCCATAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | TCCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTATAAACTCAGAGTGTTaGTCTGCAGAAGAACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SCMCSLMDLESTAMCKGFINSEC*SAEERL Trigger: AAGACGTTCTTCTGCAGAGCAACACTCTGAGTTTAT...AAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS-3UTR GCA 90 bp | CCTGTATGTGTTCGCTTATGGATTTGGAGAGTACTGCTATGTGCAAAGGCTTTAGAGTTCACTCATTTTTaGAAAGGCTTTAACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: PVCVRLWIWRVLLCAKALEFTHF*KGFNTV Trigger: CACTGTGTTAAAGCCTTTGCAAAAATGAGTGAACTC...TAAAGCCTTTGCACATAGCAGTACTCTCCAAATCCATAAGCGAACACATACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS GCA 90 bp | CATGGAATAAACTCAGAGTGTTGCTCTGCAGAAGAACGTCTTTCATaGCTTCCAAGACTTCTAGAAGTTTGGAAATGGTCTTCAATTGTA | + |
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Preference number: 5 (lower is better) Translates to: HGINSECCSAEERLS*LPRLLEVWKWSSIV Trigger: TACAATTGAAGACCATTTCCAAACTTCTAGAAGTCTTGGAAGGCATGAAAGACGTTCTTCTGCAGAGCAACACTCTGAGTTTATTCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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| CDS CCA 72 bp | GAACGTCTTTCATGCCTTCCAAGACTTCTAGAAGTTTaGAAATGGTCTTCAATTGTATGTTCTTCCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: ERLSCLPRLLEV*KWSSIVCSSQL Trigger: CAGTTGGGAAGAACATACAATTGAAGACCATTTCCAAACTTCTAGAAGTCTTGGAAGGCATGAAAGACGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108985.9 |
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