Pregenerated sensors for ZFP97 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095990Ensembl transcript IDs: ENSMUST00000147630.2
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTTGTTCTTTTATGGATTaGAAGAGTACTGTGGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: PFQTTITKPLSHSLHYPGCSFMD*KSTVAC Trigger: ACACGCCACAGTACTCTTCAAATCCATAAAAGAACA...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTAAGATTGCTGTTGCGTaGAAAGGCTTTCCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGKIAVA*KGFPTL Trigger: CAATGTGGGAAAGCCTTTGCACGCAACAGCAATCTT...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTAAGAGTGCTGTGATGTaGAAAGGCTTTGCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGKSAVM*KGFATL Trigger: CAATGTGGCAAAGCCTTTGCACATCACAGCACTCTT...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR TCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTGTTCTTTTATGGATTTaGAGAGTACTGTGGCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGVLLWI*RVLWRV Trigger: TACACGCCACAGTACTCTTCAAATCCATAAAAGAAC...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR TCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTGATCAGTATAAGACATaGAAGATCCAGTGTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGDQYKT*KIQCPY Trigger: ATAAGGACACTGGATCTTTCATGTCTTATACTGATC...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGATGACACTGAAGATGAACAAATTGTGTAAAAGCTTTGCTACACTGGTTGTTCTTTTATGGATTTaGAGGTATCTGGGACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLMTLKMNKLCKSFATLVVLLWI*RYLGHA Trigger: TGCATGTCCCAGATACCTTCAAATCCATAAAAGAAC...AACCAGTGTAGCAAAGCTTTTACACAATTTGTTCATCTTCAGTGTCATCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGACACTGAAGATGAACAAATTGTGTAAAAGCTTTGCTACACTGGTTCTGATGATGGTTTCTTaGAAAGGCTCCATCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLMTLKMNKLCKSFATLVLMMVS*KGSIIL Trigger: CAATATGATGGAGCCTTTGCAAGAAACCATCATCAG...AACCAGTGTAGCAAAGCTTTTACACAATTTGTTCATCTTCAGTGTCATCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTAAGATTTCTAAGACATaGAAAGGCTTTGCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGKISKT*KGFATL Trigger: CAATGTGGCAAAGCCTTTGCATGTCTTAGAAATCTT...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGACACTGAAGATGAACAAATTGTGTAAAAGCTTTGCTACACTGGTTTATGTCTTTGAAGAGTaGTGTGATGTGCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLMTLKMNKLCKSFATLVYVFEE*CDVQRL Trigger: AAGCCTTTGCACATCACAGCACTCTTCAAAGACATA...AACCAGTGTAGCAAAGCTTTTACACAATTTGTTCATCTTCAGTGTCATCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTAAGGTATCTGTTACATaGAAAGGCTTTTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFQTTITKPLSHSLHYPGKVSVT*KGFSTL Trigger: CAATGTGGAAAAGCCTTTGCATGTAACAGATACCTT...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGATGACACTGAAGATGAACAAATTGTGTAAAAGCTTTGCTACACTGGTTAAGGCTCCATCATATTaGATACATTCAAAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMTLKMNKLCKSFATLVKAPSY*IHSKGF Trigger: GAAACCCTTTGAATGTATTCAATATGATGGAGCCTT...AACCAGTGTAGCAAAGCTTTTACACAATTTGTTCATCTTCAGTGTCATCAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGACACTGAAGATGAACAAATTGTGTAAAAGCTTTGCTACACTGGTTAAGAGTTTTGTGATATaGAAAGGCTTTCCAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLMTLKMNKLCKSFATLVKSFVI*KGFPTL Trigger: CAATGTTGGAAAGCCTTTGCATATCACAAAACTCTT...AACCAGTGTAGCAAAGCTTTTACACAATTTGTTCATCTTCAGTGTCATCAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTCAGACTACAATAACAAAGCCTTTATCACATTCACTGCATTATCCGGGTTGTTCTTTTATGTCTTaGAAGAGTGCTGTGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: PFQTTITKPLSHSLHYPGCSFMS*KSAVMC Trigger: GCACATCACAGCACTCTTCAAAGACATAAAAGAACA...ACCCGGATAATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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| CDS CAA 72 bp | ATAGACTTTTTCTTCAGTGTGTGGTCTTCTATGTATTaGACGATCAGTATAAGACATGAAAGATCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: IDFFFSVWSSMY*TISIRHERSSV Trigger: GACACTGGATCTTTCATGTCTTATACTGATCGTCAAATACATAGAAGACCACACACTGAAGAAAAAGTCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147630.2 |
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