Pregenerated sensors for ZFP967 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095199Ensembl transcript IDs: ENSMUST00000108997.10, ENSMUST00000238250.2, ENSMUST00000238365.2, ENSMUST00000238420.2, ENSMUST00000238585.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTATCTTCCAAGCTCCTACACAACATCCCACAGAGTTCTGAAAACTaGATGTGTCCTTTGGCCCAAAGTTCCAAAATCCTTCCACAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LSSKLLHNIPQSSEN*MCPLAQSSKILPQS Trigger: GGACTGTGGAAGGATTTTGGAACTTTGGGCCAAAGGACACATTCAGTTTTCAGAACTCTGTGGGATGTTGTGTAGGAGCTTGGAAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 |
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| 3UTR CAA 90 bp | CAAAGTTCCAAAATCCTTCCACAGTCCTCCCAAAACATGGTCAGGTaGTCACAGGAATACCCACTCCTCATACCAATTTGTCTTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QSSKILPQSSQNMVR*SQEYPLLIPICLSQ Trigger: CTGACTAAGACAAATTGGTATGAGGAGTGGGTATTCCTGTGACAACCTGACCATGTTTTGGGAGGACTGTGGAAGGATTTTGGAACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCCAAAATCCTTCCACAGTCCTCCCAAAACATGGTCAGGTTGTCACAGGAGCACGTCATCATAGGTaGCTAAATCCATGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KFQNPSTVLPKHGQVVTGARHHR*LNPCLE Trigger: CTCCAAACATGGATTTAGTCACCTATGATGACGTGC...TCCTGTGACAACCTGACCATGTTTTGGGAGGACTGTGGAAGGATTTTGGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 |
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| CDS-3UTR TCA 90 bp | CAGTCCTCCCAAAACATGGTCAGGTTGTCACAGGAATACCCACTCCTCATACCATCCAAATTGCTTCCATaGCTTCTAGAAGTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSQNMVRLSQEYPLLIPSKLLP*LLEVWK Trigger: TTTCCAAACTTCTAGAAGTCATGGAAGCAATTTGGA...TGGTATGAGGAGTGGGTATTCCTGTGACAACCTGACCATGTTTTGGGAGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238585.2 |
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| 3UTR CAA 72 bp | AAAATCCTTCCACAGTCCTCCCAAAACATGGTCAGGTaGTCACAGGAATACCCACTCCTCATACCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: KILPQSSQNMVR*SQEYPLLIPIC Trigger: ACAAATTGGTATGAGGAGTGGGTATTCCTGTGACAACCTGACCATGTTTTGGGAGGACTGTGGAAGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 |
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| CDS-3UTR TCA 90 bp | CCACTCCTCATACCAATTTGTCTTAGTCAGGGTTTCTATTCCTTCACAAACATGGCACGTCATCATAGGTaGCTAAATCCATGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLIPICLSQGFYSFTNMARHHR*LNPCLE Trigger: CTCCAAACATGGATTTAGTCACCTATGATGACGTGC...CATGTTTGTGAAGGAATAGAAACCCTGACTAAGACAAATTGGTATGAGGAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 ENSMUST00000238585.2 |
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| CDS-3UTR TCA 90 bp | AGGAATACCCACTCCTCATACCAATTTGTCTTAGTCAGGGTTTCTATTCCTTCAGCACGTCATCATAGGTaGCTAAATCCATGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RNTHSSYQFVLVRVSIPSARHHR*LNPCLE Trigger: CTCCAAACATGGATTTAGTCACCTATGATGACGTGC...TGAAGGAATAGAAACCCTGACTAAGACAAATTGGTATGAGGAGTGGGTATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 ENSMUST00000238585.2 |
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| CDS-3UTR TCA 90 bp | GGTTGTCACAGGAATACCCACTCCTCATACCAATTTGTCTTAGTCAGGGTTTCTATGTCAGGACTTCCATaGCTTCTAGAAGTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCHRNTHSSYQFVLVRVSMSGLP*LLEVWK Trigger: TTTCCAAACTTCTAGAAGTCATGGAAGTCCTGACAT...AGAAACCCTGACTAAGACAAATTGGTATGAGGAGTGGGTATTCCTGTGACAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238420.2 |
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| CDS-3UTR TCA 90 bp | ACTGAAAGCAGTGCTTATTGTACCCTATTGGTTTTCTTTACTACTTGTAGCACAGCACGTCATCATAGGTaGCTAAATCCATGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TESSAYCTLLVFFTTCSTARHHR*LNPCLE Trigger: CTCCAAACATGGATTTAGTCACCTATGATGACGTGC...TGTGCTACAAGTAGTAAAGAAAACCAATAGGGTACAATAAGCACTGCTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238365.2 |
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| CDS-3UTR TCA 90 bp | GGATTTGAAGATGATTGTGATGTAGAAGGGTTTCAGGACATTGCTGATATTCATCTGCAAAGGCTTCCATaGCTTCTAGAAGTTTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GFEDDCDVEGFQDIADIHLQRLP*LLEVWK Trigger: TTTCCAAACTTCTAGAAGTCATGGAAGCCTTTGCAG...ATGAATATCAGCAATGTCCTGAAACCCTTCTACATCACAATCATCTTCAAATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108997.10 |
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| 3UTR CAA 72 bp | ATAATGCCAAGTTTTCACTCTAGTAGTTCTGGTATCTaGTTAATCACAGCTGATTCTTCAGCCCTAGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: IMPSFHSSSSGI*LITADSSALAS Trigger: ACTAGCTAGGGCTGAAGAATCAGCTGTGATTAACAAGATACCAGAACTACTAGAGTGAAAACTTGGCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238250.2 ENSMUST00000238420.2 |
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| CDS CAA 72 bp | CCAAAGGATGTCAGGACTTCCATGACTTCTAGAAGTTaGGAAATGGTCTTCAATTGTATGTTCTTCCCAACT | + |
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Preference number: 6 (lower is better) Translates to: PKDVRTSMTSRS*EMVFNCMFFPT Trigger: AGTTGGGAAGAACATACAATTGAAGACCATTTCCAAACTTCTAGAAGTCATGGAAGTCCTGACATCCTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238420.2 |
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