Pregenerated sensors for ZFP966 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089756Ensembl transcript IDs: ENSMUST00000108949.3
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTTCAGCTGTATGTATTCGATGATATTCAAGACCACTGCTTCCTaGAAAGGGTTTATTACCTTGGTTTCATTCATGGGGTGTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: FFSCMYSMIFKTTAS*KGFITLVSFMGCFS Trigger: GGAGAAACACCCCATGAATGAAACCAAGGTAATAAACCCTTTGCAGGAAGCAGTGGTCTTGAATATCATCGAATACATACAGCTGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 90 bp | TTCCTCTCTGGTATGTGTTCATTTATATACATGGAGATCAATGCTTaGTGCAAAGACTTTATAACATTAGATGCCTTCGTAGACTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: FLSGMCSFIYMEINA*CKDFITLDAFVDFL Trigger: GAGAAAGTCTACGAAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACCAGAGAGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 90 bp | AAGGTTCCTCTCTGGTATGTGTTCATTTATATACATGGAGATCAATaGTTGCTGCAAAGACTTTATAACATTAGATGCCTTCGTAGACTT | + |
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Preference number: 1 (lower is better) Translates to: KVPLWYVFIYIHGDQ*LLQRLYNIRCLRRL Trigger: AAGTCTACGAAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACCAGAGAGGAACCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGACCACTGCTTCCTGCAAAGGGTTTATTACCTTGGTTTCATTCATGGGATATCTGGAGAGTACTaGTTTCTGCAAAGCTTTACC | + |
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Preference number: 2 (lower is better) Translates to: IQDHCFLQRVYYLGFIHGISGEY*FLQSFT Trigger: GGTAAAGCTTTGCAGAAAGCAGTACTCTCCAGATAT...CCCATGAATGAAACCAAGGTAATAAACCCTTTGCAGGAAGCAGTGGTCTTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTATGTGTTCTTTTATGACATTGGAGACCACTGCTTCCTGCAAAGGCTTAGTTCGCTTATATATCTaGAGAGTACTGCTTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SCMCSFMTLETTASCKGLVRLYI*RVLLSA Trigger: TGCAGAAAGCAGTACTCTCCAGATATATAAGCGAAC...TAAGCCTTTGCAGGAAGCAGTGGTCTCCAATGTCATAAAAGAACACATACAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR CAA 90 bp | GTTCCTCTCTGGTATGTGTTCATTTATATACATGGAGATCAATGCTaGCTGCAAAGACTTTATAACATTAGATGCCTTCGTAGACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VPLWYVFIYIHGDQC*LQRLYNIRCLRRLS Trigger: AGAAAGTCTACGAAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACCAGAGAGGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCCACTACATGTTCTTTATGGATTTGAAGATGATTGTGATGTAGAAGGGGAGAGTACTGCTTTCTaGAAAGCTTTACCACATTGT | + |
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Preference number: 2 (lower is better) Translates to: FSPLHVLYGFEDDCDVEGESTAF*KALPHC Trigger: ACAATGTGGTAAAGCTTTGCAGAAAGCAGTACTCTC...CCCTTCTACATCACAATCATCTTCAAATCCATAAAGAACATGTAGTGGAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCCACTACATGTTCTTTATGGATTTGAAGATGATTGTGATGTAGAAGGGGATATTCAAGACCACTaGTTCCTGCAAAGGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: FSPLHVLYGFEDDCDVEGDIQDH*FLQRVY Trigger: ATAAACCCTTTGCAGGAAGCAGTGGTCTTGAATATC...CCCTTCTACATCACAATCATCTTCAAATCCATAAAGAACATGTAGTGGAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 72 bp | TGTATGTATTCGATGATATTCAAGACCACTGCTTCCTaGAAAGGGTTTATTACCTTGGTTTCATTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: CMYSMIFKTTAS*KGFITLVSFMG Trigger: CCCCATGAATGAAACCAAGGTAATAAACCCTTTGCAGGAAGCAGTGGTCTTGAATATCATCGAATACATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTCCACTACATGTTCTTTATGGATTTGAAGATGATTGTGATGTAGAAGGGTGTTCTTTTATGACATaGGAGACCACTGCTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: FSPLHVLYGFEDDCDVEGCSFMT*ETTASC Trigger: GCAGGAAGCAGTGGTCTCCAATGTCATAAAAGAACA...CCCTTCTACATCACAATCATCTTCAAATCCATAAAGAACATGTAGTGGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR TCA 72 bp | ATGATTTCTTTTGTGTCATTGAATACGATTGACAAGTaGAGGCAATACCACATGGCTTGCAGACATAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: MISFVSLNTIDK*RQYHMACRHRV Trigger: AACCCTATGTCTGCAAGCCATGTGGTATTGCCTTCACTTGTCAATCGTATTCAATGACACAAAAGAAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR TCA 72 bp | CTACATTATGATTTCTTTTGTGTCATTGAATACGATTaGCAAGTGAAGGCAATACCACATGGCTTGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: LHYDFFCVIEYD*QVKAIPHGLQT Trigger: TGTCTGCAAGCCATGTGGTATTGCCTTCACTTGTCAATCGTATTCAATGACACAAAAGAAATCATAATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 72 bp | TTTCAGCTGTATGTATTCGATGATATTCAAGACCACTaGTTCCTGCAAAGGGTTTATTACCTTGGTTTCATT | + |
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Preference number: 3 (lower is better) Translates to: FQLYVFDDIQDH*FLQRVYYLGFI Trigger: AATGAAACCAAGGTAATAAACCCTTTGCAGGAAGCAGTGGTCTTGAATATCATCGAATACATACAGCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTCCACTACATGTTCTTTATGGATTTGAAGATGATTGTGATGTAGAAGGGAAAGGGTTTATTACCTaGGTTTCATTCATGGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: FSPLHVLYGFEDDCDVEGKGFIT*VSFMGC Trigger: ACACCCCATGAATGAAACCAAGGTAATAAACCCTTT...CCCTTCTACATCACAATCATCTTCAAATCCATAAAGAACATGTAGTGGAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 72 bp | GGTATGTGTTCATTTATATACATGGAGATCAATGCTTaGTGCAAAGACTTTATAACATTAGATGCCTTCGTA | + |
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Preference number: 3 (lower is better) Translates to: GMCSFIYMEINA*CKDFITLDAFV Trigger: TACGAAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR GCA 72 bp | CTCTGGTATGTGTTCATTTATATACATGGAGATCAATaGTTGCTGCAAAGACTTTATAACATTAGATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LWYVFIYIHGDQ*LLQRLYNIRCL Trigger: AAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACCAGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR CAA 72 bp | AGATGCCTTCGTAGACTTTCTCTTCTGTATGATCTTTaGTCTTTGGAGGTCACTCCTTCCTGCAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RCLRRLSLLYDL*SLEVTPSCKGF Trigger: AAAGCCTTTGCAGGAAGGAGTGACCTCCAAAGACAAAAGATCATACAGAAGAGAAAGTCTACGAAGGCATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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| 3UTR CAA 72 bp | TGGTATGTGTTCATTTATATACATGGAGATCAATGCTaGCTGCAAAGACTTTATAACATTAGATGCCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: WYVFIYIHGDQC*LQRLYNIRCLR Trigger: ACGAAGGCATCTAATGTTATAAAGTCTTTGCAGCAAGCATTGATCTCCATGTATATAAATGAACACATACCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108949.3 |
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