RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP963 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000092260

Ensembl transcript IDs: ENSMUST00000130458.8

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGAGGGCTGAACAGTGCGAGGTGTaGCCTTTTGGCCACGCTATT +
Preference number: 2 (lower is better)
Translates to: RKEKPPRVRSQKNVALRAEQCEV*PFGHAI
Trigger: AATAGCGTGGCCAAAAGGCCACACCTCGCACTGTTC...AGCCCTCAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR-3UTR TCA 90 bp AGGAGAAGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGGGTTTCCTTCCAGCATaGGTGGTCACTGTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: RRRKEKPPRVRSQKNVALGFLPA*VVTVQC
Trigger: ACACTGGACAGTGACCACTCATGCTGGAAGGAAACC...CAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR-3UTR GCA 90 bp AGGAGAAGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGGTGATGTCATGGAAGTaGAAGGTCTCCCAACATTGT +
Preference number: 2 (lower is better)
Translates to: RRRKEKPPRVRSQKNVALVMSWK*KVSQHC
Trigger: ACAATGTTGGGAGACCTTGCACTTCCATGACATCAC...CAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR-3UTR GCA 90 bp AGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGAGGGCTGCCCAGCTCTTGTGTTaGTTAAGGCTTACTATAAAT +
Preference number: 2 (lower is better)
Translates to: RKEKPPRVRSQKNVALRAAQLLC*LRLTIN
Trigger: ATTTATAGTAAGCCTTAAGCAACACAAGAGCTGGGC...AGCCCTCAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR GCA 72 bp CGGGTTAGGATTGAAATCCTTTCGACAACAGAACAGTaGGAGGTGTGGCCTTTTGGCCACGCTATTTCCATC +
Preference number: 3 (lower is better)
Translates to: RVRIEILSTTEQ*EVWPFGHAISI
Trigger: GATGGAAATAGCGTGGCCAAAAGGCCACACCTCGCACTGTTCTGTTGTCGAAAGGATTTCAATCCTAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR CCA 72 bp GCTATTTCCATCCAGAGGGTTTCCTTCCAGCATGAGTaGTCACTGTCCAGTGTAATACCTAAGAGCTCCACC +
Preference number: 3 (lower is better)
Translates to: AISIQRVSFQHE*SLSSVIPKSST
Trigger: GGTGGAGCTCTTAGGTATTACACTGGACAGTGACCACTCATGCTGGAAGGAAACCCTCTGGATGGAAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR CCA 72 bp ATTGAAATCCTTTCGACAACAGAACAGTGCGAGGTGTaGCCTTTTGGCCACGCTATTTCCATCCAGAGGGTT +
Preference number: 3 (lower is better)
Translates to: IEILSTTEQCEV*PFGHAISIQRV
Trigger: AACCCTCTGGATGGAAATAGCGTGGCCAAAAGGCCACACCTCGCACTGTTCTGTTGTCGAAAGGATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR-3UTR CAA 90 bp AAGAGCTCCACCACAATGTCCATAGTCACACAGCTTTCTCCTGTATTTTCTAAGCAAGGTCTCCCAACATaGTTTACACTGACAACATTT +
Preference number: 3 (lower is better)
Translates to: KSSTTMSIVTQLSPVFSKQGLPT*FTLTTF
Trigger: AAATGTTGTCAGTGTAAACAATGTTGGGAGACCTTG...CTTAGAAAATACAGGAGAAAGCTGTGTGACTATGGACATTGTGGTGGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR TCA 72 bp AGTAGAGTTTTTCTCACATATGAGGTATACCATATCTaGAGAACACTGTCGTGTGTCGGCCTAGTATTGTTT +
Preference number: 3 (lower is better)
Translates to: SRVFLTYEVYHI*RTLSCVGLVLF
Trigger: AAACAATACTAGGCCGACACACGACAGTGTTCTTCAGATATGGTATACCTCATATGTGAGAAAAACTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR TCA 90 bp CAGTGCGAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGTTTCCTTCGATGACTGTGCCGCCTaGAGGCTTTCCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: QCEVWPFGHAISIQRVSFDDCAA*RLSHTV
Trigger: AACAGTGTGGGAAAGCCTTCAGGCGGCACAGTCATC...GAAGGAAACCCTCTGGATGGAAATAGCGTGGCCAAAAGGCCACACCTCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR GCA 90 bp CAGTGCGAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGTTTCCTTCGGGGCTTCCTCCATGTaGACAAACAGAGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QCEVWPFGHAISIQRVSFGASSM*TNRVLS
Trigger: GGAAAGAACTCTGTTTGTGCACATGGAGGAAGCCCC...GAAGGAAACCCTCTGGATGGAAATAGCGTGGCCAAAAGGCCACACCTCGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CCA 90 bp GAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGTTTCCTTCCAGCATAACAGGGGAGAAATGTaGCATGCCTATCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: EVWPFGHAISIQRVSFQHNRGEM*HAYQRM
Trigger: CATCCTCTGATAGGCATGCCACATTTCTCCCCTGTT...ATGCTGGAAGGAAACCCTCTGGATGGAAATAGCGTGGCCAAAAGGCCACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CCA 90 bp GAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGTTTCCTTCCAGCATGCCTTCCCACATATATaGGATTCATATGGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: EVWPFGHAISIQRVSFQHAFPHI*DSYGAS
Trigger: ACTAGCACCATATGAATCCCATATATGTGGGAAGGC...ATGCTGGAAGGAAACCCTCTGGATGGAAATAGCGTGGCCAAAAGGCCACACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR CAA 72 bp AGGAGTCAGAAGAATGTAGCCCTGAGGGCTGGCCGATaGGAGTTAAGAACAGCCCAGATGAAACATAGTAAG +
Preference number: 4 (lower is better)
Translates to: RSQKNVALRAGR*ELRTAQMKHSK
Trigger: CTTACTATGTTTCATCTGGGCTGTTCTTAACTCCAATCGGCCAGCCCTCAGGGCTACATTCTTCTGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CCA 90 bp AAGAGCTCCACCACAATGTCCATAGTCACACAGCTTTCTCCTGTATTTTCTAAGAGGGGGTCTCTGACATaGAACCACTCATATTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSSTTMSIVTQLSPVFSKRGSLT*NHSYFS
Trigger: GGAGAAATATGAGTGGTTCCATGTCAGAGACCCCCT...CTTAGAAAATACAGGAGAAAGCTGTGTGACTATGGACATTGTGGTGGAGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR TCA 90 bp AAGAGCTCCACCACAATGTCCATAGTCACACAGCTTTCTCCTGTATTTTCTAAGACTGTCATGCTTGCATaGAGGTTTGAGATCCATGTC +
Preference number: 4 (lower is better)
Translates to: KSSTTMSIVTQLSPVFSKTVMLA*RFEIHV
Trigger: GACATGGATCTCAAACCTTCATGCAAGCATGACAGT...CTTAGAAAATACAGGAGAAAGCTGTGTGACTATGGACATTGTGGTGGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
3UTR CAA 72 bp AACAATATAGAGAGTAGTATCTGCCCAGCTCTTGTGTaGCTTAAGGCTTACTATAAATATAAAGGTTGTATG +
Preference number: 4 (lower is better)
Translates to: NNIESSICPALV*LKAYYKYKGCM
Trigger: CATACAACCTTTATATTTATAGTAAGCCTTAAGCAACACAAGAGCTGGGCAGATACTACTCTCTATATTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS TCA 90 bp TCACACTCACAAGGCCCATTCCCAGTGTGGGCTTCCGTACACCTTTaGAAGCTGGTAAGAGAGTTCAAGTCATATTGCTCGGCCCCACAG +
Preference number: 5 (lower is better)
Translates to: SHSQGPFPVWASVHL*KLVREFKSYCSAPQ
Trigger: CTGTGGGGCCGAGCAATATGACTTGAACTCTCTTACCAGCTTTCAAAGGTGTACGGAAGCCCACACTGGGAATGGGCCTTGTGAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CAA 90 bp AGGAGAAGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGGGCTTCCGTACACCTTaGAAAGCTGGTAAGAGAGTT +
Preference number: 5 (lower is better)
Translates to: RRRKEKPPRVRSQKNVALGFRTP*KAGKRV
Trigger: AACTCTCTTACCAGCTTTCAAAGGTGTACGGAAGCC...CAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CAA 90 bp AGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAGAAGAATGTAGCCCTGAGGGCTGTGTTCCTAGTGGATTaGGAAAACAGGAAGATCTTA +
Preference number: 5 (lower is better)
Translates to: RKEKPPRVRSQKNVALRAVFLVD*ENRKIL
Trigger: TAAGATCTTCCTGTTTTCCAAATCCACTAGGAACAC...AGCCCTCAGGGCTACATTCTTCTGACTCCTAACCCGTGGCGGCTTCTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS TCA 90 bp AGTTTCTTCGACCTGATCATCTTCTGTCCTCTCACAGGGGGTCTCTaGCATGGAACCACTCATATTTCTCCAGGGATTTTTATAATGGTC +
Preference number: 5 (lower is better)
Translates to: SFFDLIIFCPLTGGL*HGTTHISPGIFIMV
Trigger: GACCATTATAAAAATCCCTGGAGAAATATGAGTGGTTCCATGTCAGAGACCCCCTGTGAGAGGACAGAAGATGATCAGGTCGAAGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CCA 90 bp CTTCGACCTGATCATCTTCTGTCCTCTCACAGGGGGTCTCTGACATaGAACCACTCATATTTCTCCAGGGATTTTTATAATGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LRPDHLLSSHRGSLT*NHSYFSRDFYNGLQ
Trigger: TTGAAGACCATTATAAAAATCCCTGGAGAAATATGAGTGGTTCCATGTCAGAGACCCCCTGTGAGAGGACAGAAGATGATCAGGTCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS GCA 90 bp CACATATATGGGATTCATATGGTGCTAGTCCTGGAAAAACTGTCATaGTTGCATGAAGGTTTGAGATCCATGTCAGAGTTTCTTCGACCT +
Preference number: 5 (lower is better)
Translates to: HIYGIHMVLVLEKLS*LHEGLRSMSEFLRP
Trigger: AGGTCGAAGAAACTCTGACATGGATCTCAAACCTTCATGCAAGCATGACAGTTTTTCCAGGACTAGCACCATATGAATCCCATATATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS GCA 90 bp TATATTACATTCATAAAACTTTCCCATAGTGGGGCTTCCTCCATGTaGACAAACAGAGTTCTTTCCACACTCCTTGTATTGATAGGGTGT +
Preference number: 5 (lower is better)
Translates to: YITFIKLSHSGASSM*TNRVLSTLLVLIGC
Trigger: ACACCCTATCAATACAAGGAGTGTGGAAAGAACTCTGTTTGTGCACATGGAGGAAGCCCCACTATGGGAAAGTTTTATGAATGTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS-3UTR CAA 90 bp ACTATAAATATAAAGGTTGTATGTATCTTTCATCCGGGAATAGCAAAGGTGGGGGAAAAACTGTCATGCTaGCATGAAGGTTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: TINIKVVCIFHPGIAKVGEKLSC*HEGLRS
Trigger: GGATCTCAAACCTTCATGCAAGCATGACAGTTTTTC...CCCCACCTTTGCTATTCCCGGATGAAAGATACATACAACCTTTATATTTATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CAA 90 bp GGCTTCCGTACACCTTTGAAAGCTGGTAAGAGAGTTCAAGTCATATaGCTCGGCCCCACAGTCCTCACGCTCACGTGGTTTATAACAGGG +
Preference number: 6 (lower is better)
Translates to: GFRTPLKAGKRVQVI*LGPTVLTLTWFITG
Trigger: CCCTGTTATAAACCACGTGAGCGTGAGGACTGTGGGGCCGAGCAATATGACTTGAACTCTCTTACCAGCTTTCAAAGGTGTACGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS TCA 72 bp CAAGGCCCATTCCCAGTGTGGGCTTCCGTACACCTTTaGAAGCTGGTAAGAGAGTTCAAGTCATATTGCTCG +
Preference number: 6 (lower is better)
Translates to: QGPFPVWASVHL*KLVREFKSYCS
Trigger: CGAGCAATATGACTTGAACTCTCTTACCAGCTTTCAAAGGTGTACGGAAGCCCACACTGGGAATGGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS TCA 72 bp ATAACAGGGGAGAAATGTGGCATGCCTATCAGAGGATaGGTGACTCGTCGAAGCCTTCCCACATATATGGGA +
Preference number: 6 (lower is better)
Translates to: ITGEKCGMPIRG*VTRRSLPTYMG
Trigger: TCCCATATATGTGGGAAGGCTTCGACGAGTCACTCATCCTCTGATAGGCATGCCACATTTCTCCCCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS TCA 72 bp GACCTGATCATCTTCTGTCCTCTCACAGGGGGTCTCTaGCATGGAACCACTCATATTTCTCCAGGGATTTTT +
Preference number: 6 (lower is better)
Translates to: DLIIFCPLTGGL*HGTTHISPGIF
Trigger: AAAAATCCCTGGAGAAATATGAGTGGTTCCATGTCAGAGACCCCCTGTGAGAGGACAGAAGATGATCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CAA 90 bp AGGGTGTTTTTCCACTGTGAGCCTCTTGATGTGTTCCTAGTGGATTaGGAAAACAGGAAGATCTTAAGCATACCTCACACTCACAAGGCC +
Preference number: 6 (lower is better)
Translates to: RVFFHCEPLDVFLVD*ENRKILSIPHTHKA
Trigger: GGCCTTGTGAGTGTGAGGTATGCTTAAGATCTTCCTGTTTTCCAAATCCACTAGGAACACATCAAGAGGCTCACAGTGGAAAAACACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS GCA 72 bp GGGATTCATATGGTGCTAGTCCTGGAAAAACTGTCATaGTTGCATGAAGGTTTGAGATCCATGTCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: GIHMVLVLEKLS*LHEGLRSMSEF
Trigger: AAACTCTGACATGGATCTCAAACCTTCATGCAAGCATGACAGTTTTTCCAGGACTAGCACCATATGAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS GCA 72 bp TTCATAAAACTTTCCCATAGTGGGGCTTCCTCCATGTaGACAAACAGAGTTCTTTCCACACTCCTTGTATTG +
Preference number: 6 (lower is better)
Translates to: FIKLSHSGASSM*TNRVLSTLLVL
Trigger: CAATACAAGGAGTGTGGAAAGAACTCTGTTTGTGCACATGGAGGAAGCCCCACTATGGGAAAGTTTTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CCA 72 bp GATCATCTTCTGTCCTCTCACAGGGGGTCTCTGACATaGAACCACTCATATTTCTCCAGGGATTTTTATAAT +
Preference number: 6 (lower is better)
Translates to: DHLLSSHRGSLT*NHSYFSRDFYN
Trigger: ATTATAAAAATCCCTGGAGAAATATGAGTGGTTCCATGTCAGAGACCCCCTGTGAGAGGACAGAAGATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CAA 72 bp TTCCACTGTGAGCCTCTTGATGTGTTCCTAGTGGATTaGGAAAACAGGAAGATCTTAAGCATACCTCACACT +
Preference number: 6 (lower is better)
Translates to: FHCEPLDVFLVD*ENRKILSIPHT
Trigger: AGTGTGAGGTATGCTTAAGATCTTCCTGTTTTCCAAATCCACTAGGAACACATCAAGAGGCTCACAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CAA 90 bp ATATATGGGATTCATATGGTGCTAGTCCTGGAAAAACTGTCATGCTaGCATGAAGGTTTGAGATCCATGTCAGAGTTTCTTCGACCTGAT +
Preference number: 6 (lower is better)
Translates to: IYGIHMVLVLEKLSC*HEGLRSMSEFLRPD
Trigger: ATCAGGTCGAAGAAACTCTGACATGGATCTCAAACCTTCATGCAAGCATGACAGTTTTTCCAGGACTAGCACCATATGAATCCCATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8
CDS CAA 72 bp ATTCATATGGTGCTAGTCCTGGAAAAACTGTCATGCTaGCATGAAGGTTTGAGATCCATGTCAGAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: IHMVLVLEKLSC*HEGLRSMSEFL
Trigger: AAGAAACTCTGACATGGATCTCAAACCTTCATGCAAGCATGACAGTTTTTCCAGGACTAGCACCATATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130458.8