Pregenerated sensors for ZFP961 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052446Ensembl transcript IDs: ENSMUST00000109997.10, ENSMUST00000131237.8, ENSMUST00000132848.2, ENSMUST00000136516.9, ENSMUST00000138304.8, ENSMUST00000145256.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCATAAATGGGATTGAAAGATGTAGGAGCTATGGACTGGGAGTGTaGTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACA | + |
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Preference number: 1 (lower is better) Translates to: PINGIERCRSYGLGV*CLLDKGAAVLFFNT Trigger: TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTTCAATCCCATTTATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR TCA 90 bp | GAATCAAAAGTCCACAGTATACTGACACATTTAGCACTGAGCAACTaGGAGAAGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ESKVHSILTHLALSN*EKPQDTVMFPMVAG Trigger: GCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCTTCTCTCAGTTGCTCAGTGCTAAATGTGTCAGTATACTGTGGACTTTTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR GCA 90 bp | ATAAATGGGATTGAAAGATGTAGGAGCTATGGACTGGGAGTGTGCTaGTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTG | + |
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Preference number: 1 (lower is better) Translates to: INGIERCRSYGLGVC*LLDKGAAVLFFNTL Trigger: CAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTTCAATCCCATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR TCA 90 bp | GAAGGCAACCTAAAGCAGTTGGTCCTTTTCACCTTTTCTAGGACTTaGACTCAAGTCATCAGGGTAGGCAGCAAGCTCCTTAATCCACCA | + |
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Preference number: 1 (lower is better) Translates to: EGNLKQLVLFTFSRT*TQVIRVGSKLLNPP Trigger: TGGTGGATTAAGGAGCTTGCTGCCTACCCTGATGACTTGAGTTCAAGTCCTAGAAAAGGTGAAAAGGACCAACTGCTTTAGGTTGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR TCA 90 bp | ACATGGTCTGTATTTAGAGTTAGATGTAGTGTGCCTCTTCAGGGATaGTTGACTGGCAGTGTGACATTCAGGAAGCTTTGGCTGGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: TWSVFRVRCSVPLQG*LTGSVTFRKLWLGN Trigger: GTTGCCCAGCCAAAGCTTCCTGAATGTCACACTGCCAGTCAATCATCCCTGAAGAGGCACACTACATCTAACTCTAAATACAGACCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136516.9 ENSMUST00000138304.8 ENSMUST00000145256.8 |
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| 3UTR TCA 90 bp | AGTCTCTCTTTACCAATTGGACTCTCAAATTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCCAGCATTCCCAGTTTATGCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: SLSLPIGLSNFSLDF*NKLPNPSIPSLCPG Trigger: ACCAGGGCATAAACTGGGAATGCTGGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145256.8 |
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| 3UTR TCA 90 bp | GTAGGCAGCAAGCTCCTTAATCCACCAAGCCATCTTGCCAGCTCTTaGAATACATTTCAATTTACTGTAGGATCTAACTTTGTTAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VGSKLLNPPSHLASS*NTFQFTVGSNFVKV Trigger: CACCTTAACAAAGTTAGATCCTACAGTAAATTGAAATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGATTAAGGAGCTTGCTGCCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR TCA 90 bp | TCTAGGCAGCACTGGGACCAACAGGTTTTATACTTCTTAGGTTCGTaGGATTTGGAAACTCATTTCATGGGTTTGAAAACATTTGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: SRQHWDQQVLYFLGS*DLETHFMGLKTFVN Trigger: GTTAACAAATGTTTTCAAACCCATGAAATGAGTTTCCAAATCTCACGAACCTAAGAAGTATAAAACCTGTTGGTCCCAGTGCTGCCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR GCA 90 bp | AACCAGGTAGGTTCAGATAAACAGATATTTCAGCATGACTCACTCTaGCCTCAACAAATAGATATTAAAACCACCGAGAAACGATTGCTT | + |
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Preference number: 1 (lower is better) Translates to: NQVGSDKQIFQHDSL*PQQIDIKTTEKRLL Trigger: AAGCAATCGTTTCTCGGTGGTTTTAATATCTATTTGTTGAGGGCAGAGTGAGTCATGCTGAAATATCTGTTTATCTGAACCTACCTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR CCA 90 bp | AAAGTTTTTCTGTTGTATGAAGCCTTTTATGCATGTCTAGGGAACTaGCAGTCCAGAACATTCTTCCACATTCCTTACATTCAGGTATCT | + |
|
Preference number: 1 (lower is better) Translates to: KVFLLYEAFYACLGN*QSRTFFHIPYIQVS Trigger: AGATACCTGAATGTAAGGAATGTGGAAGAATGTTCTGGACTGCCAGTTCCCTAGACATGCATAAAAGGCTTCATACAACAGAAAAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACGGTGGGGAATGCACATaGAGGTGGGAGGGAGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: WECAACWTRGQLFCSSTHGGECT*RWEGEM Trigger: CATTTCTCCCTCCCACCTTCATGTGCATTCCCCACC...GTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGGTTTCCCATGGTGGCTaGCTTCTAGGCAGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: AGQGGSCFVLQHTEALAKVSHGG*LLGSTG Trigger: CCCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAAC...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACAGGGAGGGAGAAATGTTaGGTGTCTTGGGGTAGATAT | + |
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Preference number: 2 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTGREKC*VSWGRY Trigger: ATATCTACCCCAAGACACTCAACATTTCTCCCTCCC...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTTCAGGGATGATTGACTGGCAGTGTGACATTCAGGAAGCTTTGGCTGGGAGCATTCCCAGTTTATaGCCTGGTGCACTCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASSGMIDWQCDIQEALAGSIPSL*PGALIF Trigger: GAAGATGAGTGCACCAGGGCATAAACTGGGAATGCT...CCCAGCCAAAGCTTCCTGAATGTCACACTGCCAGTCAATCATCCCTGAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145256.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGCTTCTAGGCAGCACTGGAACCGTTTCTCCACATaGGTCACTGTTTTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SHRTLSCFPWWLASRQHWNRFST*VTVFKV Trigger: GACCTTAAAAACAGTGACCCATGTGGAGAAACGGTT...CCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | TATGCCTGTCTACACTGTGAGTTAGCATATGCCTTTCAGCACAGTGCCGGTAACGTGCCTCTTCAGGGATaGTTGACTGGCAGTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: YACLHCELAYAFQHSAGNVPLQG*LTGSVT Trigger: TGTCACACTGCCAGTCAATCATCCCTGAAGAGGCAC...GTTACCGGCACTGTGCTGAAAGGCATATGCTAACTCACAGTGTAGACAGGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136516.9 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGCTTCTAGGCAGCACTGGCCCAAGGTCTCTATGTaGAAATCATCTTCAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SHRTLSCFPWWLASRQHWPKVSM*KSSSVS Trigger: ACTTACTGAAGATGATTTCCACATAGAGACCTTGGG...CCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR CAA 90 bp | AATGGGATTGAAAGATGTAGGAGCTATGGACTGGGAGTGTGCTGCTaGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: NGIERCRSYGLGVCC*LDKGAAVLFFNTLK Trigger: CTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTTCAATCCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACAGGTGGGGAATGCACATaGAGGTGGGAGGGAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: GGRNVECLGVDIIKAVCTGGECT*RWEGEM Trigger: CATTTCTCCCTCCCACCTTCATGTGCATTCCCCACC...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACATCCATTTACAGAGTTTaGGTCTGTGGTGGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTSIYRV*VCGGLH Trigger: ATGCAAACCACCACAGACCCAAACTCTGTAAATGGA...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACAGGTGGGGAATGCACATaGAGGTGGGAGGGAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: TRKNTPIEYTHSLGILQTGGECT*RWEGEM Trigger: CATTTCTCCCTCCCACCTTCATGTGCATTCCCCACC...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACATGTACTGAGACTTTaGCACACATACTGCATTCAT | + |
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Preference number: 2 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTHVLRL*HTYCIH Trigger: ATGAATGCAGTATGTGTGCCAAAGTCTCAGTACATG...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGCAGAGTTTGGGTCTGTaGTGGTTTGCATACGTACTA | + |
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Preference number: 2 (lower is better) Translates to: AGQGGSCFVLQHTEALAKQSLGL*WFAYVL Trigger: TAGTACGTATGCAAACCACCACAGACCCAAACTCTG...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACATTAGCACTGAGCAACTaGGAGAAGCCACAGGACACT | + |
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Preference number: 2 (lower is better) Translates to: GGRNVECLGVDIIKAVCTLALSN*EKPQDT Trigger: AGTGTCCTGTGGCTTCTCTCAGTTGCTCAGTGCTAA...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTCTTCAGAGCTGAAATaGTTCCTGATAGTCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: WECAACWTRGQLFCSSTHSSELK*FLIVFQ Trigger: TTGAAAGACTATCAGGAAGCATTTCAGCTCTGAAGA...GTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGTCCATTTACAGAGTTTaGGTCTGTGGTGGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AGQGGSCFVLQHTEALAKSIYRV*VCGGLH Trigger: ATGCAAACCACCACAGACCCAAACTCTGTAAATGGA...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGAAATGGGAGAGGCCAACAGCCATAGATTTTTCTCTCTTCACCAGGTCTCAACTTAGAGAGTTTTaGCACGTCCAACTGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: KVKWERPTAIDFSLFTRSQLREF*HVQLWH Trigger: ATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTG...AGACCTGGTGAAGAGAGAAAAATCTATGGCTGTTGGCCTCTCCCATTTCACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCTTAATCCACCAAGCCATCTTGCCAGCTCTTGAAATACATTTCAATTTAATAGCCTGGGAATCTTaGAGACAGCTATGGTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSLIHQAILPALEIHFNLIAWES*RQLWSH Trigger: GTGGGACCATAGCTGTCTGCAAGATTCCCAGGCTAT...TAAATTGAAATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGATTAAGGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACATCCACCAAGCCATCTTaGCAGCTCTTGAAATACATT | + |
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Preference number: 2 (lower is better) Translates to: GGRNVECLGVDIIKAVCTSTKPS*QLLKYI Trigger: AATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGA...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGTTTGCATACAACTTAGAGAGTTTTaGCACGTCCAACTGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GKNPAIPFTEFGSVVVCIQLREF*HVQLWH Trigger: ATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTG...TATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACACAACTTAGAGAGTTTTaGCACGTCCAACTGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TRKNTPIEYTHSLGILQTQLREF*HVQLWH Trigger: ATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTG...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACAAACACACTGAAGCTTTaGCTAAGAAAAGGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: TRKNTPIEYTHSLGILQTNTLKL*LRKGDG Trigger: CCCATCCCCTTTTCTTAGCCAAAGCTTCAGTGTGTT...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATGGTCAGAAAGCTTTCCCAAGGTCTCTATGTGGAAATCATCTTCAGTAAGTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: RMVRKLSQGLYVEIIFSKFSLDF*NKLPNP Trigger: GGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAA...CTTACTGAAGATGATTTCCACATAGAGACCTTGGGAAAGCTTTCTGACCATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTTAATCCACCAAGCCATCTTGCCAGCTCTTGAAATACATTTCAATTTACAGAGTTTGGGTCTGTaGTGGTTTGCATACGTACTA | + |
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Preference number: 2 (lower is better) Translates to: SSLIHQAILPALEIHFNLQSLGL*WFAYVL Trigger: TAGTACGTATGCAAACCACCACAGACCCAAACTCTG...TAAATTGAAATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGATTAAGGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACATCTCTCTTTACCAATTaGACTCTCAAATTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GGRNVECLGVDIIKAVCTSLFTN*TLKFLP Trigger: AGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGA...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138304.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTTAATCCACCAAGCCATCTTGCCAGCTCTTGAAATACATTTCAATTTATCCATTTACAGAGTTTaGGTCTGTGGTGGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SSLIHQAILPALEIHFNLSIYRV*VCGGLH Trigger: ATGCAAACCACCACAGACCCAAACTCTGTAAATGGA...TAAATTGAAATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGATTAAGGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCACATGGGTCACTGTTTTTAAGGTCACAGTCTCTCTTTACCAATTGGACTCTCTCTTTACCAATTaGACTCTCAAATTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSTWVTVFKVTVSLYQLDSLFTN*TLKFLP Trigger: AGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGA...GTCCAATTGGTAAAGAGAGACTGTGACCTTAAAAACAGTGACCCATGTGGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138304.8 ENSMUST00000145256.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCTTAATCCACCAAGCCATCTTGCCAGCTCTTGAAATACATTTCAATTTATCTTCAGAGCTGAAATaGTTCCTGATAGTCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SSLIHQAILPALEIHFNLSSELK*FLIVFQ Trigger: TTGAAAGACTATCAGGAAGCATTTCAGCTCTGAAGA...TAAATTGAAATGTATTTCAAGAGCTGGCAAGATGGCTTGGTGGATTAAGGAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTA | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKGV Trigger: TACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132848.2 |
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| 3UTR CCA 72 bp | ACTGAGAGAAGCCACAGGACACTGTCATGTTTCCCATaGTGGCTGGCTTCTAGGCAGCACTGGGACCAACAG | + |
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Preference number: 3 (lower is better) Translates to: TERSHRTLSCFP*WLASRQHWDQQ Trigger: CTGTTGGTCCCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCTTCTCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR GCA 72 bp | GGGATTGAAAGATGTAGGAGCTATGGACTGGGAGTGTaGTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: GIERCRSYGLGV*CLLDKGAAVLF Trigger: GAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTTCAATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR CCA 72 bp | GAAGCCACAGGACACTGTCATGTTTCCCATGGTGGCTaGCTTCTAGGCAGCACTGGGACCAACAGGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: EATGHCHVSHGG*LLGSTGTNRFY Trigger: ATAAAACCTGTTGGTCCCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| 3UTR CCA 72 bp | GATGTAGGAGCTATGGACTGGGAGTGTGCTGCTTGCTaGACAAGGGGGCAGCTGTTTTGTTCTTCAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: DVGAMDWECAAC*TRGQLFCSSTH Trigger: GTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACACTGGGAGTGTGCTGCTaGCTGGACAAGGGGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRKNTPIEYTHSLGILQTLGVCC*LDKGAA Trigger: AGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR GCA 72 bp | AAAGATGTAGGAGCTATGGACTGGGAGTGTGCTGCTTaGTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: KDVGAMDWECAA*WTRGQLFCSST Trigger: TGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGAAGGGGGCAGCTGTTTaGTTCTTCAACACACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AGQGGSCFVLQHTEALAKKGAAV*FFNTLK Trigger: CTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTT...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR TCA 72 bp | TTAGAGAGTTTTGGCACGTCCAACTGTGGCATGTACTaGGACTTTGGCACACATACTGCATTCATAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LESFGTSNCGMY*DFGTHTAFIGS Trigger: CGAGCCTATGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGCCACAGTTGGACGTGCCAAAACTCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR TCA 72 bp | GTCCACAGTATACTGACACATTTAGCACTGAGCAACTaGGAGAAGCCACAGGACACTGTCATGTTTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VHSILTHLALSN*EKPQDTVMFPM Trigger: CATGGGAAACATGACAGTGTCCTGTGGCTTCTCTCAGTTGCTCAGTGCTAAATGTGTCAGTATACTGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR CCA 72 bp | AATACACACATAGCCTGGGAATCTTGCAGACAGCTATaGTCCCACTTAGACTGGAGACTGAAAGTGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: NTHIAWESCRQL*SHLDWRLKVEP Trigger: TGGTTCCACTTTCAGTCTCCAGTCTAAGTGGGACCATAGCTGTCTGCAAGATTCCCAGGCTATGTGTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR CCA 72 bp | TTCAGGAAGCTTTGGCTGGGCAACCGTTTCTCCACATaGGTCACTGTTTTTAAGGTCACAGTCTCTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FRKLWLGNRFST*VTVFKVTVSLY Trigger: GTAAAGAGAGACTGTGACCTTAAAAACAGTGACCCATGTGGAGAAACGGTTGCCCAGCCAAAGCTTCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138304.8 ENSMUST00000145256.8 |
||
| 3UTR TCA 72 bp | CTAAAGCAGTTGGTCCTTTTCACCTTTTCTAGGACTTaGACTCAAGTCATCAGGGTAGGCAGCAAGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKQLVLFTFSRT*TQVIRVGSKLL Trigger: AAGGAGCTTGCTGCCTACCCTGATGACTTGAGTTCAAGTCCTAGAAAAGGTGAAAAGGACCAACTGCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR CCA 72 bp | CAAGGAAAAACACTCCCATTGAATACACACATAGCCTaGGAATCTTGCAGACAGCTATGGTCCCACTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGKTLPLNTHIA*ESCRQLWSHLD Trigger: GTCTAAGTGGGACCATAGCTGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACAGCATGTACTGAGACTTaGGCACACATACTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGRNVECLGVDIIKAVCTACTET*AHILHS Trigger: TGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGC...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACATTCCATTTACAGAGTTaGGGTCTGTGGTGGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGRNVECLGVDIIKAVCTFHLQS*GLWWFA Trigger: TGCAAACCACCACAGACCCAAACTCTGTAAATGGAA...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR TCA 72 bp | GTATTTAGAGTTAGATGTAGTGTGCCTCTTCAGGGATaGTTGACTGGCAGTGTGACATTCAGGAAGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VFRVRCSVPLQG*LTGSVTFRKLW Trigger: CCAAAGCTTCCTGAATGTCACACTGCCAGTCAATCATCCCTGAAGAGGCACACTACATCTAACTCTAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136516.9 ENSMUST00000138304.8 ENSMUST00000145256.8 |
||
| 3UTR CCA 72 bp | AGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTaGTGGTTTGCATACGTACTAAGGCTGCACCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RIQLFHLQSLGL*WFAYVLRLHLS Trigger: AGAAAGGTGCAGCCTTAGTACGTATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACAGCATGTACTGAGACTTaGGCACACATACTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TRKNTPIEYTHSLGILQTACTET*AHILHS Trigger: TGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGC...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGTTTGCATAGCATGTACTGAGACTTaGGCACACATACTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GKNPAIPFTEFGSVVVCIACTET*AHILHS Trigger: TGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGC...TATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR CCA 72 bp | AAATGCTTCCTGATAGTCTTTCAACTTAGAGAGTTTTaGCACGTCCAACTGTGGCATGTACTGAGACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KCFLIVFQLREF*HVQLWHVLRLW Trigger: CCAAAGTCTCAGTACATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTGAAAGACTATCAGGAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR CCA 72 bp | CTGTTGTATGAAGCCTTTTATGCATGTCTAGGGAACTaGCAGTCCAGAACATTCTTCCACATTCCTTACATT | + |
|
Preference number: 3 (lower is better) Translates to: LLYEAFYACLGN*QSRTFFHIPYI Trigger: AATGTAAGGAATGTGGAAGAATGTTCTGGACTGCCAGTTCCCTAGACATGCATAAAAGGCTTCATACAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138304.8 |
||
| 3UTR TCA 72 bp | CACTGGGACCAACAGGTTTTATACTTCTTAGGTTCGTaGGATTTGGAAACTCATTTCATGGGTTTGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HWDQQVLYFLGS*DLETHFMGLKT Trigger: TGTTTTCAAACCCATGAAATGAGTTTCCAAATCTCACGAACCTAAGAAGTATAAAACCTGTTGGTCCCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| 3UTR TCA 72 bp | TTACCAATTGGACTCTCAAATTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCCAGCATTCCCAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPIGLSNFSLDF*NKLPNPSIPSL Trigger: TAAACTGGGAATGCTGGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAAATTTGAGAGTCCAATTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145256.8 |
||
| 3UTR GCA 72 bp | GGTTCAGATAAACAGATATTTCAGCATGACTCACTCTaGCCTCAACAAATAGATATTAAAACCACCGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSDKQIFQHDSL*PQQIDIKTTEK Trigger: TTTCTCGGTGGTTTTAATATCTATTTGTTGAGGGCAGAGTGAGTCATGCTGAAATATCTGTTTATCTGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACCACAGTGGCCAGAAGTaGATGTCTTTCCGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WECAACWTRGQLFCSSTHHSGQK*MSFRTA Trigger: TGCAGTGCGGAAAGACATTCACTTCTGGCCACTGTG...GTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR CAA 72 bp | GGGATGATTGACTGGCAGTGTGACATTCAGGAAGCTTaGGCTGGGCAACCGTTTCTCCACATGGGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMIDWQCDIQEA*AGQPFLHMGHC Trigger: ACAGTGACCCATGTGGAGAAACGGTTGCCCAGCCAAAGCTTCCTGAATGTCACACTGCCAGTCAATCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136516.9 ENSMUST00000138304.8 ENSMUST00000145256.8 |
||
| CDS-3UTR TCA 90 bp | GTGACATTCAGGAAGCTTTGGCTGGGCAACCGTTTCTCCACATGGGTCACTGTTCTTAGCAACAGTGAGTaGAGCCAGGGTATCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTFRKLWLGNRFSTWVTVLSNSE*SQGIRL Trigger: GAGCCTGATACCCTGGCTTCACTCACTGTTGCTAAG...AACAGTGACCCATGTGGAGAAACGGTTGCCCAGCCAAAGCTTCCTGAATGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145256.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGCTTCTAGGCAGCACTGGTGTCTTCTGGCACAGTaGCCAGAAGTGAATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHRTLSCFPWWLASRQHWCLLAQ*PEVNVF Trigger: AAAGACATTCACTTCTGGCCACTGTGCCAGAAGACA...CCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGGTGCCTCTTCAGGGATaGTTGACTGGCAGTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AGQGGSCFVLQHTEALAKVPLQG*LTGSVT Trigger: TGTCACACTGCCAGTCAATCATCCCTGAAGAGGCAC...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGCACAGTGGCCAGAAGTaGATGTCTTTCCGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQGGSCFVLQHTEALAKHSGQK*MSFRTA Trigger: TGCAGTGCGGAAAGACATTCACTTCTGGCCACTGTG...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| 3UTR CAA 72 bp | GAAAGATGTAGGAGCTATGGACTGGGAGTGTGCTGCTaGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERCRSYGLGVCC*LDKGAAVLFFN Trigger: GTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAGTCCATAGCTCCTACATCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACATGCCTGTCTACACTGTaGGTTAGCATATGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTCLSTL*VSICLS Trigger: TGAAAGGCATATGCTAACTCACAGTGTAGACAGGCA...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCATGTACTGAGACTTTGGCACACATACTGCATTCATAGGCTCGTTTTCGGCCAGGCTCCACTGTaGGTCCCTAAATGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWHVLRLWHTYCIHRLVFGQAPL*VPKCLL Trigger: CAGAAGACATTTAGGGACTCACAGTGGAGCCTGGCC...GAAAACGAGCCTATGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGCTTCTAGGCAGCACTGGGTCTCCGAAGACTTTTaGAATATGAGAACACCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHRTLSCFPWWLASRQHWVSEDF*NMRTPY Trigger: GTAAGGTGTTCTCATATTCCAAAAGTCTTCGGAGAC...CCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACATTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTFSLDF*NKLPNP Trigger: GGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAA...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACAGGACACTGTCATGTTTCCCATGGTGGCTGGCTTCTAGGCAGCACTGGGTCCTTTTATGCAGTTaGAAAGAACAGTATCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHRTLSCFPWWLASRQHWVLLCS*KEQYLM Trigger: CATGAGATACTGTTCTTTTCAACTGCATAAAAGGAC...CCAGTGCTGCCTAGAAGCCAGCCACCATGGGAAACATGACAGTGTCCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAACTTAGAGAGTTTTGGCACGTCCAACTGTGGCATGTACTGAGACTTTGGGGCCAGGCTCCACTGTaGGTCCCTAAATGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLREFWHVQLWHVLRLWGQAPL*VPKCLL Trigger: CAGAAGACATTTAGGGACTCACAGTGGAGCCTGGCC...CCAAAGTCTCAGTACATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACGTCTCCGAAGACTTTTaGAATATGAGAACACCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WECAACWTRGQLFCSSTHVSEDF*NMRTPY Trigger: GTAAGGTGTTCTCATATTCCAAAAGTCTTCGGAGAC...GTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGGTTTTTCGAGACAGGGTATCTCTGCGTAGCCCAGCTTGTCCTGGAACTCTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FWFFETGYLCVAQLVLELFSLDF*NKLPNP Trigger: GGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAA...GAGTTCCAGGACAAGCTGGGCTACGCAGAGATACCCTGTCTCGAAAAACCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132848.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAAAAACACTCCCATTGAATACACACATAGCCTGGGAATCTTGCAGACAGTGCCTCTTCAGGGATaGTTGACTGGCAGTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TRKNTPIEYTHSLGILQTVPLQG*LTGSVT Trigger: TGTCACACTGCCAGTCAATCATCCCTGAAGAGGCAC...TGTCTGCAAGATTCCCAGGCTATGTGTGTATTCAATGGGAGTGTTTTTCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGTGCTGCTTGCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACATCTCTCTTTACCAATTaGACTCTCAAATTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVCCLLDKGAAVLFFNTSLFTN*TLKFLP Trigger: AGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGA...TGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGCAAGCAGCACACTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGAACCGTTTCTCCACATaGGTCACTGTTTTTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQGGSCFVLQHTEALAKNRFST*VTVFKV Trigger: GACCTTAAAAACAGTGACCCATGTGGAGAAACGGTT...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTTCACCAGGTCTTCCCACGTATGCTAGCAAGGATGGTCAGAAAGCTTTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLHQVFPRMLARMVRKLFSLDF*NKLPNP Trigger: GGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAA...AAGCTTTCTGACCATCCTTGCTAGCATACGTGGGAAGACCTGGTGAAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAACTTAGAGAGTTTTGGCACGTCCAACTGTGGCATGTACTGAGACTTTGGCACAGTGCCGGTAACTaGAGGCTTTCTCACAATACT | + |
|
Preference number: 4 (lower is better) Translates to: FQLREFWHVQLWHVLRLWHSAGN*RLSHNT Trigger: AGTATTGTGAGAAAGCCTTCAGTTACCGGCACTGTG...CCAAAGTCTCAGTACATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTTCGAGACAGGGTATCTCTGCGTAGCCCAGCTTGTCCTGGAACTCACTCTCTCTTTACCAATTaGACTCTCAAATTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFRDRVSLRSPACPGTHSLFTN*TLKFLP Trigger: AGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGA...GTGAGTTCCAGGACAAGCTGGGCTACGCAGAGATACCCTGTCTCGAAAAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132848.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCATGTACTGAGACTTTGGCACACATACTGCATTCATAGGCTCGTTTTCTGTCTTCTGGCACAGTaGCCAGAAGTGAATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWHVLRLWHTYCIHRLVFCLLAQ*PEVNVF Trigger: AAAGACATTCACTTCTGGCCACTGTGCCAGAAGACA...GAAAACGAGCCTATGAATGCAGTATGTGTGCCAAAGTCTCAGTACATGCCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | GTTAACTTGGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGCACAGTGCCGGTAACTaGAGGCTTTCTCACAATACT | + |
|
Preference number: 4 (lower is better) Translates to: VNLVRIQLFHLQSLGLWWHSAGN*RLSHNT Trigger: AGTATTGTGAGAAAGCCTTCAGTTACCGGCACTGTG...CCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACCAAGTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAACTTAGAGAGTTTTGGCACGTCCAACTGTGGCATGTACTGAGACTTTGGTGCCTGTCTACACTGTaGGTTAGCATATGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQLREFWHVQLWHVLRLWCLSTL*VSICLS Trigger: TGAAAGGCATATGCTAACTCACAGTGTAGACAGGCA...CCAAAGTCTCAGTACATGCCACAGTTGGACGTGCCAAAACTCTCTAAGTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR TCA 90 bp | AAGGTGAAATGGGAGAGGCCAACAGCCATAGATTTTTCTCTCTTCACCAGGTCTAAGACTTTTGGAATATaGGAACACCTTACCACACTC | + |
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Preference number: 4 (lower is better) Translates to: KVKWERPTAIDFSLFTRSKTFGI*EHLTTL Trigger: GAGTGTGGTAAGGTGTTCTCATATTCCAAAAGTCTT...AGACCTGGTGAAGAGAGAAAAATCTATGGCTGTTGGCCTCTCCCATTTCACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| 3UTR CAA 72 bp | AACTTGGTAAGAATCCAGCTATTCCATTTACAGAGTTaGGGTCTGTGGTGGTTTGCATACGTACTAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NLVRIQLFHLQS*GLWWFAYVLRL Trigger: CAGCCTTAGTACGTATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACCAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000138304.8 |
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| CDS-3UTR CCA 90 bp | GGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGTTTGCATAAACCGTTTCTCCACATaGGTCACTGTTTTTAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GKNPAIPFTEFGSVVVCINRFST*VTVFKV Trigger: GACCTTAAAAACAGTGACCCATGTGGAGAAACGGTT...TATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGAGAAATGTTGAGTGTCTTGGGGTAGATATAATCAAGGCAGTATGCACAGTCCTTTTATGCAGTTaGAAAGAACAGTATCTCATG | + |
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Preference number: 4 (lower is better) Translates to: GGRNVECLGVDIIKAVCTVLLCS*KEQYLM Trigger: CATGAGATACTGTTCTTTTCAACTGCATAAAAGGAC...TGTGCATACTGCCTTGATTATATCTACCCCAAGACACTCAACATTTCTCCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAAAGCTTTCCCAAGGTCTCTATGTGGAAATCATCTTCAGTAAGTCTTAAGACTTTTGGAATATaGGAACACCTTACCACACTC | + |
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Preference number: 4 (lower is better) Translates to: WSESFPKVSMWKSSSVSLKTFGI*EHLTTL Trigger: GAGTGTGGTAAGGTGTTCTCATATTCCAAAAGTCTT...AAGACTTACTGAAGATGATTTCCACATAGAGACCTTGGGAAAGCTTTCTGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR CCA 90 bp | GGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGTTTGCATATCTCTCTTTACCAATTaGACTCTCAAATTTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GKNPAIPFTEFGSVVVCISLFTN*TLKFLP Trigger: AGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGA...TATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR CAA 90 bp | GCTGGACAAGGGGGCAGCTGTTTTGTTCTTCAACACACTGAAGCTTTGGCTAAGGTCTCTCTTTACCAATaGGACTCTCAAATTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AGQGGSCFVLQHTEALAKVSLYQ*DSQISP Trigger: GGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGAC...CTTAGCCAAAGCTTCAGTGTGTTGAAGAACAAAACAGCTGCCCCCTTGTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS-3UTR CAA 90 bp | TTTTGGTTTTTCGAGACAGGGTATCTCTGCGTAGCCCAGCTTGTCCTGGAACTCGTCTCTCTTTACCAATaGGACTCTCAAATTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FWFFETGYLCVAQLVLELVSLYQ*DSQISP Trigger: GGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGAC...GAGTTCCAGGACAAGCTGGGCTACGCAGAGATACCCTGTCTCGAAAAACCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132848.2 |
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| CDS-3UTR CAA 90 bp | GGTAAGAATCCAGCTATTCCATTTACAGAGTTTGGGTCTGTGGTGGTTTGCATAGTCTCTCTTTACCAATaGGACTCTCAAATTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GKNPAIPFTEFGSVVVCIVSLYQ*DSQISP Trigger: GGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGAC...TATGCAAACCACCACAGACCCAAACTCTGTAAATGGAATAGCTGGATTCTTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 |
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| CDS TCA 90 bp | AGTCTCTCTTTACCAATTGGACTCTCAAATTTCTCCCTAGACTTCTaGAATAAGCTTCCAAATCCCAGCATTCCCAGTTTATGCCTACAG | + |
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Preference number: 5 (lower is better) Translates to: SLSLPIGLSNFSLDF*NKLPNPSIPSLCLQ Trigger: CTGTAGGCATAAACTGGGAATGCTGGGATTTGGAAGCTTATTTCAGAAGTCTAGGGAGAAATTTGAGAGTCCAATTGGTAAAGAGAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109997.10 ENSMUST00000131237.8 ENSMUST00000132848.2 |
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