Pregenerated sensors for ZFP959 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003198

Ensembl transcript IDs: ENSMUST00000054780.10, ENSMUST00000224379.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTCATAACATTCTCCTATAGAGTGAGTCACTCTACATGTGCAAAGTaGACCAGGACAGACAGGAGATTTTCCACTTTCCTTGTCCACAGA	+
Preference number: 5 (lower is better) Translates to: FITFSYRVSHSTCAK*TRTDRRFSTFLVHR Trigger: TCTGTGGACAAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGTTCACTTTGCACATGTAGAGTGACTCACTCTATAGGAGAATGTTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS GCA 90 bp	TCTAATTGTTCTAGGAAAGAGATTGGTACACTGCTTCTTTCCATATaGAGAGGGACAGTTGATACACCTTCCATGTCTTCTAGAACTTTG	+
Preference number: 5 (lower is better) Translates to: SNCSRKEIGTLLLSI*RGTVDTPSMSSRTL Trigger: CAAAGTTCTAGAAGACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CCA 90 bp	AGAGGTCCTCTTCATTATAGGCCGTCTTCTGTATTTGAAGATACCTaGGATGGGTTAAGCTTTTACTACTTGGCTCACATTTATCATTTC	+
Preference number: 5 (lower is better) Translates to: RGPLHYRPSSVFEDT*DGLSFYYLAHIYHF Trigger: GAAATGATAAATGTGAGCCAAGTAGTAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGACGGCCTATAATGAAGAGGACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS GCA 90 bp	ACTACATATCTTCTTCTAATTGTTCTAGGAAAGAGATTGGTACACTaGTTCTTTCCATATGCAGAGGGACAGTTGATACACCTTCCATGT	+
Preference number: 5 (lower is better) Translates to: TTYLLLIVLGKRLVH*FFPYAEGQLIHLPC Trigger: ACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGATATGTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 72 bp	AGTGAACCAGGACAGACAGGAGATTTTCCACTTTCCTaGTCCACAGAGGGCTTTTCTCCACGGTCAGTATTT	+
Preference number: 6 (lower is better) Translates to: SEPGQTGDFPLS*STEGFSPRSVF Trigger: AAATACTGACCGTGGAGAAAAGCCCTCTGTGGACAAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS TCA 72 bp	TTCTCCTATAGAGTGAGTCACTCTACATGTGCAAAGTaGACCAGGACAGACAGGAGATTTTCCACTTTCCTT	+
Preference number: 6 (lower is better) Translates to: FSYRVSHSTCAK*TRTDRRFSTFL Trigger: AAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGTTCACTTTGCACATGTAGAGTGACTCACTCTATAGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS GCA 72 bp	TCTAGGAAAGAGATTGGTACACTGCTTCTTTCCATATaGAGAGGGACAGTTGATACACCTTCCATGTCTTCT	+
Preference number: 6 (lower is better) Translates to: SRKEIGTLLLSI*RGTVDTPSMSS Trigger: AGAAGACATGGAAGGTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 72 bp	TTCCCACTGAAACTGGAAAACCAAGTACTTGTAAACTaGTATCACATTCACCTCCTCTTCTCACAAAGGGGG	+
Preference number: 6 (lower is better) Translates to: FPLKLENQVLVN*YHIHLLFSQRG Trigger: CCCCCTTTGTGAGAAGAGGAGGTGAATGTGATACAAGTTTACAAGTACTTGGTTTTCCAGTTTCAGTGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 90 bp	AAGGGGGTGACTACATATCTTCTTCTAATTGTTCTAGGAAAGAGATaGGTACACTGCTTCTTTCCATATGCAGAGGGACAGTTGATACAC	+
Preference number: 6 (lower is better) Translates to: KGVTTYLLLIVLGKR*VHCFFPYAEGQLIH Trigger: GTGTATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGATATGTAGTCACCCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 72 bp	TGGCTCACATTTATCATTTCCTTTTCCCATATGAGTTaGGACACGTCTCTGAAGAGAACAACTCAGAGCTTT	+
Preference number: 6 (lower is better) Translates to: WLTFIISFSHMS*DTSLKRTTQSF Trigger: AAAGCTCTGAGTTGTTCTCTTCAGAGACGTGTCCAAACTCATATGGGAAAAGGAAATGATAAATGTGAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 90 bp	TCTTCTGTATTTGAAGATACCTGGGATGGGTTAAGCTTTTACTACTaGGCTCACATTTATCATTTCCTTTTCCCATATGAGTTTGGACAC	+
Preference number: 6 (lower is better) Translates to: SSVFEDTWDGLSFYY*AHIYHFLFPYEFGH Trigger: GTGTCCAAACTCATATGGGAAAAGGAAATGATAAATGTGAGCCAAGTAGTAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2
CDS CAA 72 bp	TTTGAAGATACCTGGGATGGGTTAAGCTTTTACTACTaGGCTCACATTTATCATTTCCTTTTCCCATATGAG	+
Preference number: 6 (lower is better) Translates to: FEDTWDGLSFYY*AHIYHFLFPYE Trigger: CTCATATGGGAAAAGGAAATGATAAATGTGAGCCAAGTAGTAAAAGCTTAACCCATCCCAGGTATCTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054780.10 ENSMUST00000224379.2

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