Pregenerated sensors for ZFP958 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058748Ensembl transcript IDs: ENSMUST00000073201.6, ENSMUST00000202692.5
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAAACTAAACTCAAGTTCCCAGAACATAAGGGAGCTAGAGACTaGCTAATAACTTTCCATTATTCATCTTTGTTCCCCAAAACATCA | + |
|
Preference number: 1 (lower is better) Translates to: GETKLKFPEHKGARD*LITFHYSSLFPKTS Trigger: TGATGTTTTGGGGAACAAAGATGAATAATGGAAAGTTATTAGGCAGTCTCTAGCTCCCTTATGTTCTGGGAACTTGAGTTTAGTTTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTCTAACCACAAAGAGCCTGGTACTGTTCTaGCTCAGAGTTAAAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SVMHLLFPKTQCLFLTTKSLVLF*LRVKVQ Trigger: CTGAACTTTAACTCTGAGCCAGAACAGTACCAGGCT...CTTTGTGGTTAGAAACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTCTAACCACAAAGTCATCAGCATTAACCTaGTATTTTAGTTGTGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVMHLLFPKTQCLFLTTKSSALT*YFSCVG Trigger: TCCAACACAACTAAAATACCAGGTTAATGCTGATGA...CTTTGTGGTTAGAAACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| 3UTR CCA 72 bp | GTGGGAAAAATTGCTGTAGCTTGGCACAGATGTTTGTaGTTTTCAAGCTTTAAAGCCTGGTACTGTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGKIAVAWHRCL*FSSFKAWYCSG Trigger: GCCAGAACAGTACCAGGCTTTAAAGCTTGAAAACCACAAACATCTGTGCCAAGCTACAGCAATTTTTCCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTCTAACCACAAAGGCTTGGCACAGATGTTaGTGGTTTTCAAGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVMHLLFPKTQCLFLTTKAWHRC*WFSSFK Trigger: TTTAAAGCTTGAAAACCACAAACATCTGTGCCAAGC...CTTTGTGGTTAGAAACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAAAGATCAACTACATAAGGAATACTCCTAGCCCCAAATCTGATTGGTGGAAAAATTGCTGTAGCTaGGCACAGATGTTTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTKINYIRNTPSPKSDWWKNCCS*AQMFVV Trigger: AACCACAAACATCTGTGCCAAGCTACAGCAATTTTT...CCACCAATCAGATTTGGGGCTAGGAGTATTCCTTATGTAGTTGATCTTTGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR TCA 90 bp | CACAGATGTTTGTGGTTTTCAAGCTTTAAAGCCTGGTACTGTTCTGGCTCAGAGGCACTCGAAGATAGCTaGGACATGCAAAGGCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRCLWFSSFKAWYCSGSEALEDS*DMQRLY Trigger: ATAAAGCCTTTGCATGTCTCAGCTATCTTCGAGTGC...CTCTGAGCCAGAACAGTACCAGGCTTTAAAGCTTGAAAACCACAAACATCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR TCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTATTCGAAGATGGCAGTaGTATGCAAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVIRRWQ*YAKALP Trigger: TGGTAAAGCCTTTGCATATCACTGCCATCTTCGAAT...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR TCA 90 bp | ACTATTCCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGGAGAGTATGGTGGTCTaGAAAGGCTTTACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TIPNNSFSYASSVPQNAMESMVV*KGFTTL Trigger: CAGTGTGGTAAAGCCTTTTCAGACCACCATACTCTC...CATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGGAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR GCA 90 bp | TCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTCTAACCACAAAGAAGATGGCAGTGATATaGAAAGGCTTTACCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVMHLLFPKTQCLFLTTKKMAVI*KGFTTW Trigger: CCATGTGGTAAAGCCTTTGCATATCACTGCCATCTT...CTTTGTGGTTAGAAACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR GCA 90 bp | CACAGATGTTTGTGGTTTTCAAGCTTTAAAGCCTGGTACTGTTCTGGCTCAGAGAAGATAGCTGAGACATaGAAAGGCTTTATCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HRCLWFSSFKAWYCSGSEKIAET*KGFITL Trigger: CAGTGTGATAAAGCCTTTGCATGTCTCAGCTATCTT...CTCTGAGCCAGAACAGTACCAGGCTTTAAAGCTTGAAAACCACAAACATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR GCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTGAAACTACTGGGACATaGAAAGGTTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVETTGT*KGFTTL Trigger: CAATGTGGTAAAACCTTTGCATGTCCCAGTAGTTTC...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTGTATTCGGAGAGTATaGTGGTCTGAAAAGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVCIRRV*WSEKAL Trigger: TAAAGCCTTTTCAGACCACCATACTCTCCGAATACA...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR TCA 90 bp | CTGACAAAGATCAACTACATAAGGAATACTCCTAGCCCCAAATCTGATTGGTGGGAGACTATTGGACTGTaGAAAGATTTTGCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LTKINYIRNTPSPKSDWWETIGL*KDFATL Trigger: CAATGTGGCAAAATCTTTTCACAGTCCAATAGTCTC...CCACCAATCAGATTTGGGGCTAGGAGTATTCCTTATGTAGTTGATCTTTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR GCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTGAGTCTACTATGATATaGAAAGGCTTTAAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVESTMI*KGFKTL Trigger: CAGTGTCTTAAAGCCTTTGCATATCATAGTAGACTC...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTGTACTTGGAGACTATTaGACTGTGAAAAGATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVVLGDY*TVKRFC Trigger: GCAAAATCTTTTCACAGTCCAATAGTCTCCAAGTAC...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CCA 90 bp | CACAGATGTTTGTGGTTTTCAAGCTTTAAAGCCTGGTACTGTTCTGGCTCAGAGGAGACTACTATCATATaGAAAGGCTTTACCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRCLWFSSFKAWYCSGSEETTII*KGFTTS Trigger: AGATGTGGTAAAGCCTTTCCATATGATAGTAGTCTC...CTCTGAGCCAGAACAGTACCAGGCTTTAAAGCTTGAAAACCACAAACATCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTCTAACCACAAAGGTTTTTGGAAACTACTaGGACATGCAAAGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVMHLLFPKTQCLFLTTKVFGNY*DMQRFY Trigger: GTAAAACCTTTGCATGTCCCAGTAGTTTCCAAAAAC...CTTTGTGGTTAGAAACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CCA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTGTTCTTTTATGTACTTaGAGACTATTGGACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNNSFSYASSVPQNAMPVVLLCT*RLLDCE Trigger: TTCACAGTCCAATAGTCTCCAAGTACATAAAAGAAC...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CAA 90 bp | CCTAACAACAGCTTCAGTTATGCATCTTCTGTTCCCCAAAACGCAATGCCTGTTTGTACTTGGAGACTATaGGACTGTGAAAAGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNNSFSYASSVPQNAMPVCTWRL*DCEKIL Trigger: CAAAATCTTTTCACAGTCCAATAGTCTCCAAGTACA...AACAGGCATTGCGTTTTGGGGAACAGAAGATGCATAACTGAAGCTGTTGTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS-3UTR CAA 90 bp | CTGACAAAGATCAACTACATAAGGAATACTCCTAGCCCCAAATCTGATTGGTGGAATTCTTTTATGTATTaGGAGACTACCGTGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTKINYIRNTPSPKSDWWNSFMY*ETTVMC Trigger: GCACATCACGGTAGTCTCCAAATACATAAAAGAATT...CCACCAATCAGATTTGGGGCTAGGAGTATTCCTTATGTAGTTGATCTTTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202692.5 |
||
| CDS CAA 90 bp | AGGTCTTCCATGTCTTCTAGAACTTTGAAAATGTTCTTCAATAGTTaGGTCTTCCAAATTGTAACCTATAGCAGTGAGGTTCCAGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSSMSSRTLKMFFNS*VFQIVTYSSEVPVG Trigger: ACCTACTGGAACCTCACTGCTATAGGTTACAATTTGGAAGACCAAACTATTGAAGAACATTTTCAAAGTTCTAGAAGACATGGAAGACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073201.6 ENSMUST00000202692.5 |
||
| CDS GCA 72 bp | ATGAATTCTTTTATGTATTTGGAGACTACCGTGATGTaGAAAAGCTTCACCATACTTAATTTCTTCATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MNSFMYLETTVM*KSFTILNFFIG Trigger: CCCTATGAAGAAATTAAGTATGGTGAAGCTTTTGCACATCACGGTAGTCTCCAAATACATAAAAGAATTCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073201.6 ENSMUST00000202692.5 |
||