Pregenerated sensors for ZFP957 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071262Ensembl transcript IDs: ENSMUST00000040802.5, ENSMUST00000161649.9
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGACCTaGGAACATAGGAAGTGCTGGCCTAGGCAGACGCAGCGGGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LVSFFSCGVTSLSVT*EHRKCWPRQTQRGC Trigger: GCACCCCCGCTGCGTCTGCCTAGGCCAGCACTTCCTATGTTCTCAGGTCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTCAGACGCAGCGGGGGTaGAGGGTAGAGCAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PHIVTMEIVSMETAIPTSQTQRG*RVEQSE Trigger: CTCACTCTGCTCTACCCTGCACCCCCGCTGCGTCTG...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAAGAGTGAGGTATGGTTaGTCAACAGGAGGATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPRVRYG*STGGFH Trigger: ATGGAATCCTCCTGTTGAGCAACCATACCTCACTCT...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCAGACGCAGCGGGGGTaGAGGGTAGAGCAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEQTQRG*RVEQSE Trigger: CTCACTCTGCTCTACCCTGCACCCCCGCTGCGTCTG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR-3UTR GCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTAGAGTGAGGTATGGTTaGTCAACAGGAGGATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: AIPTSCIFLFLWCHQFECRVRYG*STGGFH Trigger: ATGGAATCCTCCTGTTGAGCAACCATACCTCACTCT...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR GCA 72 bp | CATAGGAAGTGCTGGCCTAGGCAGACGCAGCGGGGGTaGAGGGTAGAGCAGAGTGAGGTATGGTTGCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: HRKCWPRQTQRG*RVEQSEVWLLN Trigger: GTTGAGCAACCATACCTCACTCTGCTCTACCCTGCACCCCCGCTGCGTCTGCCTAGGCCAGCACTTCCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR TCA 72 bp | TTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGACCTaGGAACATAGGAAGTGCTGGCCTAGGCAGACGCAG | + |
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Preference number: 3 (lower is better) Translates to: FFSCGVTSLSVT*EHRKCWPRQTQ Trigger: CTGCGTCTGCCTAGGCCAGCACTTCCTATGTTCTCAGGTCACACTCAAACTGGTGACACCACAGGAAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| 3UTR CCA 72 bp | CCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATaGAAACGGCCATTCCAACATCTTGTATCTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: PSPTLSQWRLCP*KRPFQHLVSFF Trigger: AAAGAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACGTAACCGGCCCCCTTaGCACAGAGACAGCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPRNRPP*HRDSKP Trigger: TGGTTTGCTGTCTCTGTGGCAAGGGGGCCGGTTACG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACTCTGCTCCTTCTGCTaGTGCTGTTGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPLCSFC*CCCSSS Trigger: GGAGGAGGAGCAACAGCAGCAGCAGAAGGAGCAGAG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTACGAGGGCGCCCCCTaGACAGGGACCGAGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSYEGAP*TGTEDL Trigger: GAGGTCCTCGGTCCCTGTCCAGGGGGCGCCCTCGTA...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAAGCATGTCACATCTCTaGCGTTTTCCAGCGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPSMSHL*RFPALP Trigger: TGGAAGCGCTGGAAAACGCCAGAGATGTGACATGCT...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAGTCTCACCTTGTGCTTaGGGCACCTCACTGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPVSPCA*GTSLRN Trigger: ATTTCTCAGTGAGGTGCCCCAAGCACAAGGTGAGAC...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGTACGAGGGCGCCCCCTaGACAGGGACCGAGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVYEGAP*TGTEDL Trigger: GAGGTCCTCGGTCCCTGTCCAGGGGGCGCCCTCGTA...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTTACGAGGGCGACCCCTaGACAGGGACCGAGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCYEGDP*TGTEDL Trigger: GAGGTCCTCGGTCCCTGTCCAGGGGTCGCCCTCGTA...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACGTCTTCTTCAGCATTaGCGATTGTACAAACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPRLLQH*RLYKQL Trigger: GAGCTGTTTGTACAATCGTCAATGCTGAAGAAGACG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAGGTGGAGGTGGTTGCTaGTTCTGTTTCTTTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPGGGGC*FCFFCL Trigger: TAAGCAAAAGAAACAGAAGCAGCAACCACCTCCACC...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGGCAGCCGGGCTCCTCTaGTCCTTCTGCTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEAAGLL*SFCCCC Trigger: ACAGCAGCAGCAGAAGGAGCAGAGGAGCCCGGCTGC...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTACGAGGGCGACCCCTaGACAGGGACCGAGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: CHNGDCVHGNGHSNILYLYEGDP*TGTEDL Trigger: GAGGTCCTCGGTCCCTGTCCAGGGGTCGCCCTCGTA...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACCAAGTAGGTTCCATTaGCCCAGAGAATACAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPPSRFH*PREYNP Trigger: AGGATTGTATTCTCTGGGCCAATGGAACCTACTTGG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTAGAAGCACTTTTGTaGCGAACCTTGACTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPLEALL*RTLTLL Trigger: GAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAA...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTGCAGCCGGGCTCCTCTaGTCCTTCTGCTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CHNGDCVHGNGHSNILYLAAGLL*SFCCCC Trigger: ACAGCAGCAGCAGAAGGAGCAGAGGAGCCCGGCTGC...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGGCAGCCAGGCTCCTCTaGTCCTTCTGCTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEAARLL*SFCCCC Trigger: GCAACAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGC...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGCAGTCTCACCTTGTaGTTGGGGCACCTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSCSLTL*LGHLTE Trigger: CTCAGTGAGGTGCCCCAAGCACAAGGTGAGACTGCA...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCGGTTTTCCGCTTCCTTaGCCGGGCCCCAGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFGFPLP*PGPRLP Trigger: AGGAAGCCTGGGGCCCGGCCAAGGAAGCGGAAAACC...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTGGTTTTCCGCTTCCTTaGCCGGGCCCCAGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CHNGDCVHGNGHSNILYLGFPLP*PGPRLP Trigger: AGGAAGCCTGGGGCCCGGCCAAGGAAGCGGAAAACC...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCGTAACCGGCCCCCTTaGCACAGAGACAGCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFERNRPP*HRDSKP Trigger: TGGTTTGCTGTCTCTGTGGCAAGGGGGCCGGTTACG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTCCTCTGCTCCTTCTaGTGCTGCTGTTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVLLCSF*CCCCSS Trigger: GGAGGAGCAACAGCAGCAGCAGAAGGAGCAGAGGAG...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCGCAGCCAGGCTCCTCTaGTCCTTCTGCTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFAARLL*SFCCCC Trigger: GCAACAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGC...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAATTCAGCAAACAATCTaGATCAATGGCACATGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPIQQTI*INGTWV Trigger: TACCCATGTGCCATTGATGCAGATTGTTTGCTGAAT...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAAACAATCTGCATCAATaGCACATGGGTAATGGTATC | + |
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Preference number: 4 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPNNLHQ*HMGNGI Trigger: GATACCATTACCCATGTGCCATTGATGCAGATTGTT...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR TCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGAGATTGAACCTAGGATaGGCAGCCAGGCTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFERLNLG*AARLLC Trigger: GCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAATCT...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTACTCTGCTCCTTCTGCTaGTGCTGTTGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVLCSFC*CCCSSS Trigger: GGAGGAGGAGCAACAGCAGCAGCAGAAGGAGCAGAG...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGCTCCTCTGCTCCTTCTaGTGCTGCTGTTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVLLCSF*CCCCSS Trigger: GGAGGAGCAACAGCAGCAGCAGAAGGAGCAGAGGAG...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCCAGCCTTCTGGCAGTaGGAGCATGTCACATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVPAFWQ*EHVTSL Trigger: CAGAGATGTGACATGCTCCCACTGCCAGAAGGCTGG...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR TCA 90 bp | TCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGACCTGAGAACAAGATTGAACCTAGGATaGGCAGCCAGGCTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCIFLFLWCHQFECDLRTRLNLG*AARLLC Trigger: GCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAATCT...TGTTCTCAGGTCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGTGCTCCTTCTGCTGCTaGTGTTGCTCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVCSFCC*CCSSSS Trigger: TGAGGAGGAGGAGCAACAGCAGCAGCAGAAGGAGCA...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTTGCTCCTTCTGCTGCTaGTGTTGCTCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECCSFCC*CCSSSS Trigger: TGAGGAGGAGGAGCAACAGCAGCAGCAGAAGGAGCA...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGCAGGCCATAGAGCCTaGCATAGACCAAGTAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVAGHRA*HRPSRF Trigger: GAACCTACTTGGTCTATGGCAGGCTCTATGGCCTGC...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTAATGGTATCGGAAGGTaGAGCCTTTGTTGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSNGIGR*SLCCSS Trigger: GCTGCTACAACAAAGGCTGCACCTTCCGATACCATT...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCTGCAGTCTCACCTTGTaGTTGGGGCACCTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFCSLTL*LGHLTE Trigger: CTCAGTGAGGTGCCCCAAGCACAAGGTGAGACTGCA...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCCACCTTCTCGTCTCTaGAGTCTCACCTTGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEPPSRL*SLTLCL Trigger: CAAGCACAAGGTGAGACTGCAGAGACGAGAAGGTGG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR CCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTCCAGCCTTCTGGCAGTaGGAGCATGTCACATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECPAFWQ*EHVTSL Trigger: CAGAGATGTGACATGCTCCCACTGCCAGAAGGCTGG...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS-3UTR TCA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTACTCAGGACCACCTTTTaGTGTGGTAGGTACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVLRTTF*CGRYRG Trigger: CCCTCTGTACCTACCACATCAAAAGGTGGTCCTGAG...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTTGGGGCACCTCACTaGGAAATTCTCCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVLGAPH*EILLIQ Trigger: CTGAATGAGGAGAATTTCTCAGTGAGGTGCCCCAAG...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGGAGGTGGAGGTGGTTaGTGCTTCTGTTTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVGGGGG*CFCFFC Trigger: GCAAAAGAAACAGAAGCAGCAACCACCTCCACCTCC...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGGGAGGTGGAGGTGGTTaGTGCTTCTGTTTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEGGGGG*CFCFFC Trigger: GCAAAAGAAACAGAAGCAGCAACCACCTCCACCTCC...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGGCAGGCCATAGAGCCTaGCATAGACCAAGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVAGHRA*HRPSRF Trigger: GAACCTACTTGGTCTATGGCAGGCTCTATGGCCTGC...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTACCACCTTCTCGTCTCTaGAGTCTCACCTTGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVPPSRL*SLTLCL Trigger: CAAGCACAAGGTGAGACTGCAGAGACGAGAAGGTGG...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTTGGGAACTGCTTGTTTaGTTTTCCGCTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCWELLV*FSASLA Trigger: GGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCA...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTACTTGGTTTTGGCATTaGTTTTACCTAGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSTWFWH*FYLVAG Trigger: CCCAGCCACTAGGTAAAACCAATGCCAAAACCAAGT...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTAGCATGTCACATCTCTaGCGTTTTCCAGCGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCSMSHL*RFPALP Trigger: TGGAAGCGCTGGAAAACGCCAGAGATGTGACATGCT...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTCTTGGGGCACCTCACTaGGAAATTCTCCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFLGAPH*EILLIQ Trigger: CTGAATGAGGAGAATTTCTCAGTGAGGTGCCCCAAG...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTAAGCTGGGAGCACTTTaGTTCCTGTGTTGCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCKLGAL*FLCCYR Trigger: CCTATAGCAACACAGGAAGCAAAGTGCTCCCAGCTT...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTGTTACCACAGGTCCCTaGAGCATAAAGGATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCVTTGP*SIKDEA Trigger: AGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAAC...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTATCTGCAGAACTTTCTaGAATCTGAGGGGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFICRTF*NLRGLR Trigger: CCTCAGCCCCCTCAGATTCCAGAAAGTTCTGCAGAT...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTATCTGCAGAACTTTCTaGAATCTGAGGGGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECICRTF*NLRGLR Trigger: CCTCAGCCCCCTCAGATTCCAGAAAGTTCTGCAGAT...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGTCTCACCTTGTGCTTaGGGCACCTCACTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECVSPCA*GTSLRN Trigger: ATTTCTCAGTGAGGTGCCCCAAGCACAAGGTGAGAC...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTTTGATCTCCGGTTCTTaGGGGTCTACAATGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECLISGS*GSTMGT Trigger: AGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAA...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTTTGATCTCCGGTTCTTaGGGGTCTACAATGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFLISGS*GSTMGT Trigger: AGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAA...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTCGTCTTCTTCAGCATTaGCGATTGTACAAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCRLLQH*RLYKQL Trigger: GAGCTGTTTGTACAATCGTCAATGCTGAAGAAGACG...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTTGCTGCTGTTGCTCCTaGGTGTCAGTTTTTGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCCCCCS*VSVFEL Trigger: TAGTTCAAAAACTGACACTCAGGAGCAACAGCAGCA...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTGGTGGAGGTGGTTGCTaGTTCTGTTTCTTTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVGGGGC*FCFFCL Trigger: TAAGCAAAAGAAACAGAAGCAGCAACCACCTCCACC...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGAAGCTGGGAGCACTTTaGTTCCTGTGTTGCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVKLGAL*FLCCYR Trigger: CCTATAGCAACACAGGAAGCAAAGTGCTCCCAGCTT...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCGTTACCACAGGTCCCTaGAGCATAAAGGATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFVTTGP*SIKDEA Trigger: AGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAAC...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTAATGGTATCGGAAGGTaGAGCCTTTGTTGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHNGDCVHGNGHSNILYLNGIGR*SLCCSS Trigger: GCTGCTACAACAAAGGCTGCACCTTCCGATACCATT...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTGGAAAGACTTGGTTTTaGCATTGGTTTTACCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSGKTWF*HWFYLV Trigger: CACTAGGTAAAACCAATGCCAAAACCAAGTCTTTCC...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTCTTCGGAAGAGTGGCTaGATAATTTTGGGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSLRKSG*IILGIK Trigger: TTTTATCCCCAAAATTATCCAGCCACTCTTCCGAAG...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTAGAATACAATCCTCATaGACCCAAAATTCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHIVTMEIVSMETAIPTSRIQSS*TQNSLL Trigger: CAGCAACGAATTTTGGGTCCATGAGGATTGTATTCT...AGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCCAAGTAGGTTCCATTaGCCCAGAGAATACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEPSRFH*PREYNP Trigger: AGGATTGTATTCTCTGGGCCAATGGAACCTACTTGG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR TCA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATGCTGCTGTTGCTCCTaGGTGTCAGTTTTTGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVCCCCS*VSVFEL Trigger: TAGTTCAAAAACTGACACTCAGGAGCAACAGCAGCA...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGGTCTACAATGGGAACTaGTTGTTTGGTTTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAIPTSCIFLFLWCHQFEVYNGN*LFGFPL Trigger: AAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAC...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTTTAGAAGCACTTTTGTaGCGAACCTTGACTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCLEALL*RTLTLL Trigger: GAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAA...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTTGAGGGTCTACAATaGGAACTGCTTGTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNGHSNILYLSFPVVSPVLEGLQ*ELLVWF Trigger: AAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAG...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTACTTGGTTTTGGCATTaGTTTTACCTAGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECTWFWH*FYLVAG Trigger: CCCAGCCACTAGGTAAAACCAATGCCAAAACCAAGT...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCCTTTGGCTCTTCATCTaGAGAACTTTCTGGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFLWLFI*RTFWNL Trigger: CAGATTCCAGAAAGTTCTGCAGATGAAGAGCCAAAG...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCGTCTACAATGGGAACTaGTTGTTTGGTTTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFVYNGN*LFGFPL Trigger: AAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAC...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTAACCTTGACTTTGCTCTaGATTTCTGTGGACCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVTLTLL*ISVDLL Trigger: TAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGT...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTCTTGAGGGTCTACAATaGGAACTGCTTGTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIPTSCIFLFLWCHQFECLEGLQ*ELLVWF Trigger: AAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAG...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTGGAAAGACTTGGTTTTaGCATTGGTTTTACCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HIVTMEIVSMETAIPTSCGKTWF*HWFYLV Trigger: CACTAGGTAAAACCAATGCCAAAACCAAGTCTTTCC...ACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGACCTGAGAACAATTCAGCAAACAATCTaGATCAATGGCACATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCIFLFLWCHQFECDLRTIQQTI*INGTWV Trigger: TACCCATGTGCCATTGATGCAGATTGTTTGCTGAAT...TGTTCTCAGGTCACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTCTTCGGAAGAGTGGCTaGATAATTTTGGGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CHNGDCVHGNGHSNILYLLRKSG*IILGIK Trigger: TTTTATCCCCAAAATTATCCAGCCACTCTTCCGAAG...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTAGAATACAATCCTCATaGACCCAAAATTCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFRIQSS*TQNSLL Trigger: CAGCAACGAATTTTGGGTCCATGAGGATTGTATTCT...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CCA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGAACAATCTGCATCAATaGCACATGGGTAATGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVNNLHQ*HMGNGI Trigger: GATACCATTACCCATGTGCCATTGATGCAGATTGTT...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | AAAAGGGTCCAAAGAGGTCACCCATGTTACCGTAACCGGCCCCCTTaGCACAGAGACAGCAAACCACCGGCTCCACTACAGAAGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRVQRGHPCYRNRPP*HRDSKPPAPLQKIL Trigger: CAGAATCTTCTGTAGTGGAGCCGGTGGTTTGCTGTCTCTGTGGCAAGGGGGCCGGTTACGGTAACATGGGTGACCTCTTTGGACCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACTTGATCTCCGGTTCTaGAGGGTCTACAATGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPLDLRF*RVYNGN Trigger: GTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCACTCCTTCTGCTGCTGTaGCTCCTGAGTGTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPLLLLL*LLSVSF Trigger: AAAACTGACACTCAGGAGCAACAGCAGCAGAAGGAG...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCTCCCCCACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCAGACTTGGTTTTGGCATaGGTTTTACCTAGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPSPTLSQWRLCPWKRPDLVLA*VLPSGW Trigger: CCAGCCACTAGGTAAAACCAATGCCAAAACCAAGTC...TGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGTGGGGGAGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | TCACATCTCTGGCGTTTTCCAGCGCTTCCAGCAGGCCATAGAGCCTaGCATAGACCAAGTAGGTTCCATTGGCCCAGAGAATACAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHLWRFPALPAGHRA*HRPSRFHWPREYNP Trigger: AGGATTGTATTCTCTGGGCCAATGGAACCTACTTGGTCTATGGCAGGCTCTATGGCCTGCTGGAAGCGCTGGAAAACGCCAGAGATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | CAAACCACCGGCTCCACTACAGAAGATTCTGTTACCACAGGTCCCTaGAGCATAAAGGATGAAGCTGGGAGCACTTTGCTTCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTTGSTTEDSVTTGP*SIKDEAGSTLLPVL Trigger: CAACACAGGAAGCAAAGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAACAGAATCTTCTGTAGTGGAGCCGGTGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CCA 90 bp | CATTGGCCCAGAGAATACAATCCTCATGGACCCAAAATTCGTTGCTaGGGAGAGGTCGTTCAGGGATTTGTAACTCCCACTCAGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HWPREYNPHGPKIRC*GEVVQGFVTPTQDH Trigger: GTGGTCCTGAGTGGGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CCA 90 bp | CTTCCAGCAGGCCATAGAGCCTGCCATAGACCAAGTAGGTTCCATTaGCCCAGAGAATACAATCCTCATGGACCCAAAATTCGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPAGHRACHRPSRFH*PREYNPHGPKIRCW Trigger: CCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATGGAACCTACTTGGTCTATGGCAGGCTCTATGGCCTGCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 90 bp | CACTACAGAAGATTCTGTTACCACAGGTCCCTGCAGCATAAAGGATaGAGCTGGGAGCACTTTGCTTCCTGTGTTGCTATAGGGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HYRRFCYHRSLQHKG*SWEHFASCVAIGRG Trigger: ACCCCTCCCTATAGCAACACAGGAAGCAAAGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAACAGAATCTTCTGTAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | TTCCATTGGCCCAGAGAATACAATCCTCATGGACCCAAAATTCGTTaGTGGGGAGAGGTCGTTCAGGGATTTGTAACTCCCACTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FHWPREYNPHGPKIR*WGEVVQGFVTPTQD Trigger: GTCCTGAGTGGGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | GGAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTCTCTGCAGTCTCACCTaGTGCTTGGGGCACCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GNGHSNILYLSFPVVSPVLCSLT*CLGHLT Trigger: AGTGAGGTGCCCCAAGCACAAGGTGAGACTGCAGAG...AACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTCTCTGCAGTCTCACCTaGTGCTTGGGGCACCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CHNGDCVHGNGHSNILYLLCSLT*CLGHLT Trigger: AGTGAGGTGCCCCAAGCACAAGGTGAGACTGCAGAG...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 90 bp | TTACCTAGTGGCTGGGTAGCGTACTTTAGCTTGATCTCCGGTTCTTaGGGGTCTACAATGGGAACTGCTTGTTTGGTTTTCCGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPSGWVAYFSLISGS*GSTMGTACLVFRFL Trigger: AAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAGCTAAAGTACGCTACCCAGCCACTAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | TTAGAACCCTTAGAAGCACTTTTGTGCCGAACCTTGACTTTGCTCTaGATTTCTGTGGACCTCTTAGGAGGTGGATTCTTCGGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEPLEALLCRTLTLL*ISVDLLGGGFFGRV Trigger: CACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 90 bp | TCCTCCTCCTCAGTGTCAGTTTTAGAACCCTTAGAAGCACTTTTGTaGCGAACCTTGACTTTGCTCTGCATTTCTGTGGACCTCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSVSVLEPLEALL*RTLTLLCISVDLLG Trigger: TCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGACACTGAGGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCTTGATCTCCGGTTCTaGAGGGTCTACAATGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TAIPTSCIFLFLWCHQFELDLRF*RVYNGN Trigger: GTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGCTCCTTCTGCTGCTGTaGCTCCTGAGTGTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAIPTSCIFLFLWCHQFELLLLL*LLSVSF Trigger: AAAACTGACACTCAGGAGCAACAGCAGCAGAAGGAG...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATGGACCCAAAATTCGTaGCTGGGGAGAGGTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVWTQNS*LGRGRS Trigger: TGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCA...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | GCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTTGGACCCAAAATTCGTaGCTGGGGAGAGGTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIPTSCIFLFLWCHQFECWTQNS*LGRGRS Trigger: TGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCA...ACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTTTTGCCTCCGCTTTTTaGGCTTTGGCTCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFFASAF*ALALHL Trigger: CAGATGAAGAGCCAAAGCCAAAAAAGCGGAGGCAAA...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATTTGCCTCCGCTTTTTaGGCTTTGGCTCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVFASAF*ALALHL Trigger: CAGATGAAGAGCCAAAGCCAAAAAAGCGGAGGCAAA...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | TCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTTCCCCTTAGAAGCACTTTaGTGCCGAACCTTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQWRLCPWKRPFQHLVSFPLEAL*CRTLTL Trigger: CAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGG...GAAAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTACCCTTAGAAGCACTTTaGTGCCGAACCTTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVPLEAL*CRTLTL Trigger: CAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGG...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTCGTCTTCTTCAGCATaGACGATTGTACAAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAIPTSCIFLFLWCHQFESSSSA*TIVQTA Trigger: AGCTGTTTGTACAATCGTCAATGCTGAAGAAGACGA...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGACAGTCTCTTTACTGTaGCCCTTAGAGGCTACATTT | + |
|
Preference number: 5 (lower is better) Translates to: TAIPTSCIFLFLWCHQFETVSLL*PLEATF Trigger: AAATGTAGCCTCTAAGGGCAACAGTAAAGAGACTGT...CTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | ACATTGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTACAGGTACAGAGGGCTTaGTGTCTAAAACAGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSQWRLCPWKRPFQHLVQVQRA*CLKQSL Trigger: AAGAGACTGTTTTAGACACAAAGCCCTCTGTACCTG...TACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTCAGGTACAGAGGGCTTaGTGTCTAAAACAGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHNGDCVHGNGHSNILYLQVQRA*CLKQSL Trigger: AAGAGACTGTTTTAGACACAAAGCCCTCTGTACCTG...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | TGTCACAATGGAGATTGTGTCCATGGAAACGGCCATTCCAACATCTTGTATCTTGGGAAAGACTTGGTTTaGGCATTGGTTTTACCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CHNGDCVHGNGHSNILYLGKDLV*ALVLPS Trigger: ACTAGGTAAAACCAATGCCAAAACCAAGTCTTTCCC...AAGATACAAGATGTTGGAATGGCCGTTTCCATGGACACAATCTCCATTGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGGGGAAAGACTTGGTTTaGGCATTGGTTTTACCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVGKDLV*ALVLPS Trigger: ACTAGGTAAAACCAATGCCAAAACCAAGTCTTTCCC...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | CCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTGAGTGTGTCGTCTTCTTCAGCATaGACGATTGTACAAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFQHLVSFFSCGVTSLSVSSSSA*TIVQTA Trigger: AGCTGTTTGTACAATCGTCAATGCTGAAGAAGACGA...CACACTCAAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS-3UTR CAA 90 bp | GAAACGGCCATTCCAACATCTTGTATCTTTCTTTTCCTGTGGTGTCACCAGTTTACAGTCTCTTTACTGTaGCCCTTAGAGGCTACATTT | + |
|
Preference number: 5 (lower is better) Translates to: ETAIPTSCIFLFLWCHQFTVSLL*PLEATF Trigger: AAATGTAGCCTCTAAGGGCAACAGTAAAGAGACTGT...AAACTGGTGACACCACAGGAAAAGAAAGATACAAGATGTTGGAATGGCCGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 72 bp | GAGTCTTTGGAGCGCTGGCGCAGATTGAACCTAGGATaGGCAGCCGGGCTCCTCTGCTCCTTCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESLERWRRLNLG*AAGLLCSFCCC Trigger: GCAGCAGCAGAAGGAGCAGAGGAGCCCGGCTGCTCATCCTAGGTTCAATCTGCGCCAGCGCTCCAAAGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CCA 72 bp | CGCCAGCCTTCTGGCAGTGGGAGCATGTCACATCTCTaGCGTTTTCCAGCGCTTCCAGCAGGCCATAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQPSGSGSMSHL*RFPALPAGHRA Trigger: GGCTCTATGGCCTGCTGGAAGCGCTGGAAAACGCCAGAGATGTGACATGCTCCCACTGCCAGAAGGCTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 72 bp | GAGTCTTTGGAGCGCTGGCGCAGATTGAACCTAGGATaGGCAGCCAGGCTCCTCTGCTCCTTCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ESLERWRRLNLG*AARLLCSFCCC Trigger: ACAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAATCTGCGCCAGCGCTCCAAAGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 72 bp | CAAAGAGGTCACCCATGTTACCGTAACCGGCCCCCTTaGCACAGAGACAGCAAACCACCGGCTCCACTACAG | + |
|
Preference number: 6 (lower is better) Translates to: QRGHPCYRNRPP*HRDSKPPAPLQ Trigger: CTGTAGTGGAGCCGGTGGTTTGCTGTCTCTGTGGCAAGGGGGCCGGTTACGGTAACATGGGTGACCTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 90 bp | CCCTGGACAGGGACCGAGGACCTCCACCCCGCTCAGGACCACCTTTaGATGAGGCAGGTACAGAGGGCTTTGTGTCTAAAACAGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PWTGTEDLHPAQDHL*MRQVQRALCLKQSL Trigger: AAGAGACTGTTTTAGACACAAAGCCCTCTGTACCTGCCTCATCAAAAGGTGGTCCTGAGCGGGGTGGAGGTCCTCGGTCCCTGTCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 72 bp | GATCTCCGGTTCTTGAGGGTCTACAATGGGAACTGCTaGTTTGGTTTTCCGCTTCCTTGGCCGGGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DLRFLRVYNGNC*FGFPLPWPGPR Trigger: CCTGGGGCCCGGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAGAACCGGAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 72 bp | GGGACCGAGGACCTCCACCCCGCTCAGGACCACCTTTaGATGAGGCAGGTACAGAGGGCTTTGTGTCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GTEDLHPAQDHL*MRQVQRALCLK Trigger: TTTTAGACACAAAGCCCTCTGTACCTGCCTCATCAAAAGGTGGTCCTGAGCGGGGTGGAGGTCCTCGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 72 bp | CTTGATCTCCGGTTCTTGAGGGTCTACAATGGGAACTaGTTGTTTGGTTTTCCGCTTCCTTGGCCGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LDLRFLRVYNGN*LFGFPLPWPGP Trigger: GGGGCCCGGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 72 bp | TGGCGTTTTCCAGCGCTTCCAGCAGGCCATAGAGCCTaGCATAGACCAAGTAGGTTCCATTGGCCCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: WRFPALPAGHRA*HRPSRFHWPRE Trigger: TTCTCTGGGCCAATGGAACCTACTTGGTCTATGGCAGGCTCTATGGCCTGCTGGAAGCGCTGGAAAACGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 90 bp | GTTCCATTGGCCCAGAGAATACAATCCTCATGGACCCAAAATTCGTaGCTGGGGAGAGGTCGTTCAGGGATTTGTAACTCCCACTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPLAQRIQSSWTQNS*LGRGRSGICNSHSG Trigger: TCCTGAGTGGGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 72 bp | GGCTCCACTACAGAAGATTCTGTTACCACAGGTCCCTaGAGCATAAAGGATGAAGCTGGGAGCACTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSTTEDSVTTGP*SIKDEAGSTLL Trigger: AAGCAAAGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAACAGAATCTTCTGTAGTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS GCA 72 bp | CCCAGAGAATACAATCCTCATGGACCCAAAATTCGTTaGTGGGGAGAGGTCGTTCAGGGATTTGTAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PREYNPHGPKIR*WGEVVQGFVTP Trigger: GGGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 72 bp | GCCCAGAGAATACAATCCTCATGGACCCAAAATTCGTaGCTGGGGAGAGGTCGTTCAGGGATTTGTAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: AQRIQSSWTQNS*LGRGRSGICNS Trigger: GGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CAA 90 bp | GGACCTCTTAGGAGGTGGATTCTTCGGAAGAGTGGCTGGATAATTTaGGGGATAAAAGGGTCCAAAGAGGTCACCCATGTTACCGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: GPLRRWILRKSGWII*GIKGSKEVTHVTVT Trigger: GGTTACGGTAACATGGGTGACCTCTTTGGACCCTTTTATCCCCAAAATTATCCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 72 bp | GGCTGGGTAGCGTACTTTAGCTTGATCTCCGGTTCTTaGGGGTCTACAATGGGAACTGCTTGTTTGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GWVAYFSLISGS*GSTMGTACLVF Trigger: GAAAACCAAACAAGCAGTTCCCATTGTAGACCCTCAAGAACCGGAGATCAAGCTAAAGTACGCTACCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS TCA 72 bp | TCTCTGCAGTCTCACCTTGTGCTTGGGGCACCTCACTaGGAAATTCTCCTCATTCAGCAAACAATCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLQSHLVLGAPH*EILLIQQTICI Trigger: GATGCAGATTGTTTGCTGAATGAGGAGAATTTCTCAGTGAGGTGCCCCAAGCACAAGGTGAGACTGCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
||
| CDS CCA 72 bp | GACTTTGCTCTGCATTTCTGTGGACCTCTTAGGAGGTaGATTCTTCGGAAGAGTGGCTGGATAATTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: DFALHFCGPLRR*ILRKSGWIILG Trigger: CCCCAAAATTATCCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CCA 72 bp | GGCCATAGAGCCTGCCATAGACCAAGTAGGTTCCATTaGCCCAGAGAATACAATCCTCATGGACCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: GHRACHRPSRFH*PREYNPHGPKI Trigger: AATTTTGGGTCCATGAGGATTGTATTCTCTGGGCCAATGGAACCTACTTGGTCTATGGCAGGCTCTATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 72 bp | ACAGAGGGCTTTGTGTCTAAAACAGTCTCTTTACTGTaGCCCTTAGAGGCTACATTTTTACGAGGGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TEGFVSKTVSLL*PLEATFLRGRP Trigger: GGGGCGCCCTCGTAAAAATGTAGCCTCTAAGGGCAACAGTAAAGAGACTGTTTTAGACACAAAGCCCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 90 bp | TGCTCCTCCTCCTCAGTGTCAGTTTTAGAACCCTTAGAAGCACTTTaGTGCCGAACCTTGACTTTGCTCTGCATTTCTGTGGACCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: CSSSSVSVLEPLEAL*CRTLTLLCISVDLL Trigger: TAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGACACTGAGGAGGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS TCA 72 bp | AGATTCTGTTACCACAGGTCCCTGCAGCATAAAGGATaGAGCTGGGAGCACTTTGCTTCCTGTGTTGCTATA | + |
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Preference number: 6 (lower is better) Translates to: RFCYHRSLQHKG*SWEHFASCVAI Trigger: TATAGCAACACAGGAAGCAAAGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGACCTGTGGTAACAGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CCA 72 bp | AGAGAATACAATCCTCATGGACCCAAAATTCGTTGCTaGGGAGAGGTCGTTCAGGGATTTGTAACTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: REYNPHGPKIRC*GEVVQGFVTPT Trigger: AGTGGGAGTTACAAATCCCTGAACGACCTCTCCCCAGCAACGAATTTTGGGTCCATGAGGATTGTATTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 72 bp | AGGAGGTGGATTCTTCGGAAGAGTGGCTGGATAATTTaGGGGATAAAAGGGTCCAAAGAGGTCACCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: RRWILRKSGWII*GIKGSKEVTHV Trigger: AACATGGGTGACCTCTTTGGACCCTTTTATCCCCAAAATTATCCAGCCACTCTTCCGAAGAATCCACCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 90 bp | TCAGTTTTAGAACCCTTAGAAGCACTTTTGTGCCGAACCTTGACTTaGCTCTGCATTTCTGTGGACCTCTTAGGAGGTGGATTCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: SVLEPLEALLCRTLT*LCISVDLLGGGFFG Trigger: TCCGAAGAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 90 bp | TCAGTGTCAGTTTTAGAACCCTTAGAAGCACTTTTGTGCCGAACCTaGACTTTGCTCTGCATTTCTGTGGACCTCTTAGGAGGTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: SVSVLEPLEALLCRT*TLLCISVDLLGGGF Trigger: GAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS GCA 72 bp | TTAGAAGCACTTTTGTGCCGAACCTTGACTTTGCTCTaGATTTCTGTGGACCTCTTAGGAGGTGGATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LEALLCRTLTLL*ISVDLLGGGFF Trigger: GAAGAATCCACCTCCTAAGAGGTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS GCA 72 bp | TCAGTGTCAGTTTTAGAACCCTTAGAAGCACTTTTGTaGCGAACCTTGACTTTGCTCTGCATTTCTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SVSVLEPLEALL*RTLTLLCISVD Trigger: GTCCACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 72 bp | TCCTCAGTGTCAGTTTTAGAACCCTTAGAAGCACTTTaGTGCCGAACCTTGACTTTGCTCTGCATTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSVSVLEPLEAL*CRTLTLLCISV Trigger: CACAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGTGCTTCTAAGGGTTCTAAAACTGACACTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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| CDS CAA 90 bp | TTCCGGCTCCTCACCAATTTGATCTGTTCTTCGTCTTCTTCAGCATaGACGATTGTACAAACAGCTCCAAGTTCACCCTTATTTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: FRLLTNLICSSSSSA*TIVQTAPSSPLFTA Trigger: TGCAGTAAATAAGGGTGAACTTGGAGCTGTTTGTACAATCGTCAATGCTGAAGAAGACGAAGAACAGATCAAATTGGTGAGGAGCCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040802.5 ENSMUST00000161649.9 |
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