Pregenerated sensors for ZFP955B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096910Ensembl transcript IDs: ENSMUST00000099414.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTACTCACCATGAGGTTAGGAAAGCCCAAAGGGGGTATTTCTTaGAGCGCCAGCCAAGGAAAAGCCTACGAGAGCAAGCGCAAGACA | + |
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Preference number: 1 (lower is better) Translates to: CLLTMRLGKPKGGIS*SASQGKAYESKRKT Trigger: TGTCTTGCGCTTGCTCTCGTAGGCTTTTCCTTGGCTGGCGCTTCAAGAAATACCCCCTTTGGGCTTTCCTAACCTCATGGTGAGTAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 90 bp | ACTGAGGATCTGAGCTCCATCACTGGGACTCACATAACGAAAATATaGGAACTGAATCCAGAAAGCTGTCTGCTGCTCCCCACATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: TEDLSSITGTHITKI*ELNPESCLLLPTCP Trigger: TGGACATGTGGGGAGCAGCAGACAGCTTTCTGGATTCAGTTCTCATATTTTCGTTATGTGAGTCCCAGTGATGGAGCTCAGATCCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR GCA 90 bp | CCAGTCTATCTCCATTCTTTTAAAGGCTTATTATCTCATGTATTTTaGCTATACGTATGTGTATGCGATGTTCAGAGCCCAGCAGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PVYLHSFKGLLSHVF*LYVCVCDVQSPAEG Trigger: ACCCTCTGCTGGGCTCTGAACATCGCATACACATACGTATAGGCAAAATACATGAGATAATAAGCCTTTAAAAGAATGGAGATAGACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 90 bp | GAAACCTCGACTTACTTCCGGCTGAAGAACTACCATGTCATAGACTaGGCTTTGAATACCACCCATTGTCTAAAACATGTTTATCTACAA | + |
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Preference number: 1 (lower is better) Translates to: ETSTYFRLKNYHVID*ALNTTHCLKHVYLQ Trigger: TTGTAGATAAACATGTTTTAGACAATGGGTGGTATTCAAAGCTCAGTCTATGACATGGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATGGCTGGGAGTCACCAGTGATGTGTGGCCGGTaGTTTAGCCAGAGTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: AEGVRSPGTGVTDGWESPVMCGR*FSQSSH Trigger: GTGGGAACTCTGGCTAAAGCACCGGCCACACATCAC...TGGTGACTCCCAGCCATCAGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CAA 90 bp | TTGCCTACTCACCATGAGGTTAGGAAAGCCCAAAGGGGGTATTTCTaGAAGCGCCAGCCAAGGAAAAGCCTACGAGAGCAAGCGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LPTHHEVRKAQRGYF*KRQPRKSLREQAQD Trigger: GTCTTGCGCTTGCTCTCGTAGGCTTTTCCTTGGCTGGCGCTTCAAGAAATACCCCCTTTGGGCTTTCCTAACCTCATGGTGAGTAGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGACCTCCTGCTCCTGACCGCACTCCTTGAGAGGCTGATGCTGTCACTGCTCACATCCTTCTTCCAATaGCAAGCATATGTTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ADLLLLTALLERLMLSLLTSFFQ*QAYVPD Trigger: ATCAGGAACATATGCTTGGCATTGGAAGAAGGATGT...GAGCAGTGACAGCATCAGCCTCTCAAGGAGTGCGGTCAGGAGCAGGAGGTCTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACAATCCAGAAAGCTGTCTaGTGCTCCCCACATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LPNSFFLQVVELKVCASTIQKAV*CSPHVH Trigger: GTGGACATGTGGGGAGCAGCAGACAGCTTTCTGGAT...TGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | ACGTATGTGTATGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAAGTTTGTGTTGAATCATaGCAGTGGCCTCACAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: TYVYAMFRAQQRVSDHQEVCVES*QWPHSV Trigger: GACGCTGTGAGGCCACTGGCATGATTCAACACAAAC...TTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCATACACATACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CCA 90 bp | ACGTATGTGTATGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACGCTCCTCCCTAGCATaGAGACTTCAGGAGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TYVYAMFRAQQRVSDHQERSSLA*RLQEFH Trigger: ATGAAACTCCTGAAGTCTCCATGCTAGGGAGGAGCG...TTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCATACACATACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | CCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACACTTTACCATGTCATAGACTaGGCTTTGAATACCACCCAT | + |
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Preference number: 2 (lower is better) Translates to: PNSFFLQVVELKVCASTLYHVID*ALNTTH Trigger: ATGGGTGGTATTCAAAGCTCAGTCTATGACATGGTA...AAGTGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGCTCACAGCGTCTGCATaGATAAACTCTGTTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSVEGFSDNPLLFVSFLLLTASA*INSVTR Trigger: CCTGGTAACAGAGTTTATTCATGCAGACGCTGTGAG...CAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAACACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATACTTAAATCCTAGCGGCTGTGAATaGCAGACAGTGTCCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LISVLYSRDDSHLQSYLNPSGCE*QTVSLV Trigger: AACCAAGGACACTGTCTGTCATTCACAGCCGCTAGG...ATTTAAGTATGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | CCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACACTTTGGAGCAGAAAGAACTaGAACAATAGTTTGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PNSFFLQVVELKVCASTLWSRKN*NNSLVR Trigger: TCTTACCAAACTATTGTTTCAGTTCTTTCTGCTCCA...AAGTGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTATTCTCTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATCCAAAGTGAGAAACTaGAGACCTCCTGCTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VYSLISVLYSRDDSHLQSSKVRN*RPPAPD Trigger: GTCAGGAGCAGGAGGTCTGCAGTTTCTCACTTTGGA...TGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAGAGAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CAA 90 bp | GCTGAAGAACTACCATGTCATAGACTGAGCTTTGAATACCACCCATaGTCTAAAACATGTTTATCTACAAGTTACTGCCCAGCACACTGT | + |
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Preference number: 2 (lower is better) Translates to: AEELPCHRLSFEYHP*SKTCLSTSYCPAHC Trigger: ACAGTGTGCTGGGCAGTAACTTGTAGATAAACATGTTTTAGACAATGGGTGGTATTCAAAGCTCAGTCTATGACATGGTAGTTCTTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGTGTCACTTGCTTTCTTaGAATGGGAATGGTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSVEGFSDNPLLFVSFLLCHLLS*NGNGLC Trigger: ACACAAACCATTCCCATTTCAAGAAAGCAAGTGACA...CAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAACACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATATGTTAGTAAAGGGTaGGAAGGTCTCCATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPYVSKG*EGLHVA Trigger: AGCCACATGGAGACCTTCTCACCCTTTACTAACATA...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCAGCTCCGAAGAGTGGATaGTTTACAGTAGAGCACTTA | + |
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Preference number: 2 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPAPKSG*FTVEHL Trigger: TAAGTGCTCTACTGTAAAGCATCCACTCTTCGGAGC...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTATTCTCTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCAATGCAAGAGCAAGTGTaGATCTATGTACACTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: VYSLISVLYSRDDSHLQSMQEQV*IYVHLY Trigger: GTACAAGTGTACATAGATGCACACTTGCTCTTGCAT...TGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAGAGAATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGATCCACTGGCGTGCCAATGGTTACTCTTATTTTTAGGAATTTCTGTAGTTCTTTCATGTATTTaGAGGGATTTGGAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FHDPLACQWLLLFLGISVVLSCI*RDLEKV Trigger: CACCTTTTCCAAATCCCTTCAAATACATGAAAGAAC...TACAGAAATTCCTAAAAATAAGAGTAACCATTGGCACGCCAGTGGATCATGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGATCCACTGGCGTGCCAATGGTTACTCTTATTTTTAGGAATTTCTGTATTCTTGAAATGGGAATaGTTTGTGTTGAATCATGCC | + |
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Preference number: 2 (lower is better) Translates to: FHDPLACQWLLLFLGISVFLKWE*FVLNHA Trigger: GGCATGATTCAACACAAACCATTCCCATTTCAAGAA...TACAGAAATTCCTAAAAATAAGAGTAACCATTGGCACGCCAGTGGATCATGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | GTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGTGGCTaGGATCCGCCAGGTAAAGGGAGCCACTTCCGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VLEKGQREEGGG*DPPGKGSHFRP Trigger: AGGCCGGAAGTGGCTCCCTTTACCTGGCGGATCCCAGCCACCGCCTTCCTCCCTTTGCCCCTTTTCCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CAA 90 bp | GCAGACCTCCTGCTCCTGACCGCACTCCTTGAGAGGCTGATGCTGTCACTGCTCGGCATGAGTGTATTCTaGCCCCAAACCTCATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ADLLLLTALLERLMLSLLGMSVF*PQTSCK Trigger: TTTGCATGAGGTTTGGGGCAAGAATACACTCATGCC...GAGCAGTGACAGCATCAGCCTCTCAAGGAGTGCGGTCAGGAGCAGGAGGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | CCGCTCCTCCCTAGCATGGAGACTTCAGGAGTTTCATaGCAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PLLPSMETSGVS*QCAETLSLAAL Trigger: GAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTCCTGAAGTCTCCATGCTAGGGAGGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | AAGCTGTCTGCTGCTCCCCACATGTCCACTGAGGCATaGGTGTATTCTTGCCCCAAACCTCATGCAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: KLSAAPHMSTEA*VYSCPKPHANE Trigger: CTCATTTGCATGAGGTTTGGGGCAAGAATACACTCATGCCTCAGTGGACATGTGGGGAGCAGCAGACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | ACCATGAGGTTAGGAAAGCCCAAAGGGGGTATTTCTTaGAGCGCCAGCCAAGGAAAAGCCTACGAGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: TMRLGKPKGGIS*SASQGKAYESK Trigger: CTTGCTCTCGTAGGCTTTTCCTTGGCTGGCGCTTCAAGAAATACCCCCTTTGGGCTTTCCTAACCTCATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | GAAGTGAAAGGTAGAGGAGAAAGCCGCTCCGAAGAGTaGATGCTTTACAGTAGAGCACTTAGACACCGCTCC | + |
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Preference number: 3 (lower is better) Translates to: EVKGRGESRSEE*MLYSRALRHRS Trigger: GGAGCGGTGTCTAAGTGCTCTACTGTAAAGCATCCACTCTTCGGAGCGGCTTTCTCCTCTACCTTTCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | AGCTTCCTTTTCTCCAATGTGTATGAGGTACCTGTATaGTGTGCTCTGATCACACCCACCCTTACCCTCGCC | + |
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Preference number: 3 (lower is better) Translates to: SFLFSNVYEVPV*CALITPTLTLA Trigger: GGCGAGGGTAAGGGTGGGTGTGATCAGAGCACATCATACAGGTACCTCATACACATTGGAGAAAAGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | TACAGTAGAGCACTTAGACACCGCTCCTCCCTAGCATaGAGACTTCAGGAGTTTCATGACAGTGCGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: YSRALRHRSSLA*RLQEFHDSALK Trigger: TTTCAGCGCACTGTCATGAAACTCCTGAAGTCTCCATGCTAGGGAGGAGCGGTGTCTAAGTGCTCTACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | CTGAGCTCCATCACTGGGACTCACATAACGAAAATATaGGAACTGAATCCAGAAAGCTGTCTGCTGCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSSITGTHITKI*ELNPESCLLLP Trigger: GGGGAGCAGCAGACAGCTTTCTGGATTCAGTTCTCATATTTTCGTTATGTGAGTCCCAGTGATGGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR GCA 72 bp | AGTTCAGAAGACAGTAGGATCTCTTGCCGACACATTTaGCTACTCACCATGAGGTTAGGAAAGCCCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SSEDSRISCRHI*LLTMRLGKPKG Trigger: CCCTTTGGGCTTTCCTAACCTCATGGTGAGTAGGCAAATGTGTCGGCAAGAGATCCTACTGTCTTCTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | GTCACTGCTCTGTCACTTGCTTTCTTGAAATGGGAATaGTTTGTGTTGAATCATGCCAGTGGCCTCACAGCG | + |
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Preference number: 3 (lower is better) Translates to: VTALSLAFLKWE*FVLNHASGLTA Trigger: CGCTGTGAGGCCACTGGCATGATTCAACACAAACCATTCCCATTTCAAGAAAGCAAGTGACAGAGCAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CAA 90 bp | ACGTATGTGTATGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGTCACTTGCTTTCTaGAAATGGGAATGGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: TYVYAMFRAQQRVSDHQELSLAF*KWEWFV Trigger: CACAAACCATTCCCATTTCAAGAAAGCAAGTGACAG...TTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCATACACATACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CAA 90 bp | ACGTATGTGTATGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAAACAACCCGCTTTTGTTaGTTTCTTTCCTTCTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: TYVYAMFRAQQRVSDHQETTRFC*FLSFCY Trigger: ATAGCAGAAGGAAAGAAACAAACAAAAGCGGGTTGT...TTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCATACACATACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | TATCTTCATGACTCATGTGCTAAGAAGATTGTCCCCTaGCATCCAAATGAACACTTGGGACCCACGTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: YLHDSCAKKIVP*HPNEHLGPTCL Trigger: TAGGCACGTGGGTCCCAAGTGTTCATTTGGATGTCAGGGGACAATCTTCTTAGCACATGAGTCATGAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR GCA 72 bp | TGCTTTCTTGAAATGGGAATGGTTTGTGTTGAATCATaGCAGTGGCCTCACAGCGTCTGCATGAATAAACTC | + |
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Preference number: 3 (lower is better) Translates to: CFLEMGMVCVES*QWPHSVCMNKL Trigger: GAGTTTATTCATGCAGACGCTGTGAGGCCACTGGCATGATTCAACACAAACCATTCCCATTTCAAGAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | CTTGAAATGGGAATGGTTTGTGTTGAATCATGCCAGTaGCCTCACAGCGTCTGCATGAATAAACTCTGTTAC | + |
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Preference number: 3 (lower is better) Translates to: LEMGMVCVESCQ*PHSVCMNKLCY Trigger: GTAACAGAGTTTATTCATGCAGACGCTGTGAGGCCACTGGCATGATTCAACACAAACCATTCCCATTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CCA 72 bp | TCTCTAGTTCGATCCATTCTCCAAGCAACAGGACTGTaGCTTTTCTTTTTCGACTCACAGTCTATTGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLVRSILQATGL*LFFFDSQSIVV Trigger: CACTACAATAGACTGTGAGTCGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATCGAACTAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR-3UTR CAA 90 bp | CTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATACTTAAATCAAAGGGGGTATTTCTaGAAGCGCCAGCCAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LISVLYSRDDSHLQSYLNQRGYF*KRQPRK Trigger: TTTCCTTGGCTGGCGCTTCAAGAAATACCCCCTTTG...ATTTAAGTATGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR GCA 72 bp | TTATTATCTCATGTATTTTGCCTATACGTATGTGTATaGGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: LLSHVFCLYVCV*DVQSPAEGVRS Trigger: TGATCTGACACCCTCTGCTGGGCTCTGAACATCGCATACACATACGTATAGGCAAAATACATGAGATAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR TCA 72 bp | ACTTACTTCCGGCTGAAGAACTACCATGTCATAGACTaGGCTTTGAATACCACCCATTGTCTAAAACATGTT | + |
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Preference number: 3 (lower is better) Translates to: TYFRLKNYHVID*ALNTTHCLKHV Trigger: AACATGTTTTAGACAATGGGTGGTATTCAAAGCTCAGTCTATGACATGGTAGTTCTTCAGCCGGAAGTAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR GCA 72 bp | CTCCATTCTTTTAAAGGCTTATTATCTCATGTATTTTaGCTATACGTATGTGTATGCGATGTTCAGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LHSFKGLLSHVF*LYVCVCDVQSP Trigger: TGGGCTCTGAACATCGCATACACATACGTATAGGCAAAATACATGAGATAATAAGCCTTTAAAAGAATGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | GCAGACCTCCTGCTCCTGACCGCACTCCTTGAGAGGCTGATGCTGTCACTGCTCCCCATTCTCCTAGACTaGAGTTCACAGCCACGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ADLLLLTALLERLMLSLLPILLD*SSQPRP Trigger: AGGACGTGGCTGTGAACTTCAGTCTAGGAGAATGGG...GAGCAGTGACAGCATCAGCCTCTCAAGGAGTGCGGTCAGGAGCAGGAGGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATGGCTGGGAGTCACCAGAGCACCCGAATGGGTaGAGGCTTTCCCACAATATT | + |
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Preference number: 4 (lower is better) Translates to: AEGVRSPGTGVTDGWESPEHPNG*RLSHNI Trigger: AATATTGTGGGAAAGCCTTCACCCATTCGGGTGCTC...TGGTGACTCCCAGCCATCAGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | ACCCACCCTTACCCTCGCCCGCCTCCTCCTGGTTCTCCTTTTATCCCAGAGAGTGTATACTGTTTCTCTTaGGTATGGCGTCTTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: THPYPRPPPPGSPFIPESVYCFS*VWRLSC Trigger: GCATGAAAGACGCCATACTCAAGAGAAACAGTATAC...ACTCTCTGGGATAAAAGGAGAACCAGGAGGAGGCGGGCGAGGGTAAGGGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATGGCTGGGAGTCACCAGTTTCTCTGGAGCTGTaGGTAGTTCACATCCATACT | + |
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Preference number: 4 (lower is better) Translates to: AEGVRSPGTGVTDGWESPVSLEL*VVHIHT Trigger: AGTATGGATGTGAACTACCCACAGCTCCAGAGAAAC...TGGTGACTCCCAGCCATCAGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CAA 72 bp | CACCATGAGGTTAGGAAAGCCCAAAGGGGGTATTTCTaGAAGCGCCAGCCAAGGAAAAGCCTACGAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HHEVRKAQRGYF*KRQPRKSLREQ Trigger: TTGCTCTCGTAGGCTTTTCCTTGGCTGGCGCTTCAAGAAATACCCCCTTTGGGCTTTCCTAACCTCATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATGGCTGGGAGTCACCAAGGATGAGTGACCATTaGTGTCTTTTACATTCACAC | + |
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Preference number: 4 (lower is better) Translates to: AEGVRSPGTGVTDGWESPRMSDH*CLLHSH Trigger: GTGTGAATGTAAAAGACATCAATGGTCACTCATCCT...TGGTGACTCCCAGCCATCAGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | GCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATGGCTGGGAGTCACCAATGCTTTTGAAGGTATaGGGAACATGTAAACCCTTT | + |
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Preference number: 4 (lower is better) Translates to: AEGVRSPGTGVTDGWESPMLLKV*GTCKPF Trigger: AAAGGGTTTACATGTTCCTCATACCTTCAAAAGCAT...TGGTGACTCCCAGCCATCAGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | CTGCCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACAAACGCTTTGCCACACTaGGCACATGTATACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPNSFFLQVVELKVCASTNALPH*AHVYCF Trigger: GAAACAGTATACATGTGCTCAGTGTGGCAAAGCGTT...TGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | CTGCCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACAGTTTTTCCTGCAGTATaGATTCGTTCATGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LPNSFFLQVVELKVCASTVFPAV*IRSWLE Trigger: TTCCAACCATGAACGAATTCATACTGCAGGAAAAAC...TGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | CCTAACTCTTTCTTCCTCCAAGTGGTGGAACTAAAGGTGTGTGCCAGCACACTTAATTTCTCAACCACCTaGATTCTCAAGTTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PNSFFLQVVELKVCASTLNFSTT*ILKFLW Trigger: CCAGAGAAACTTGAGAATTCAGGTGGTTGAGAAATT...AAGTGTGCTGGCACACACCTTTAGTTCCACCACTTGGAGGAAGAAAGAGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCAAACGCTTTGCCACACTaGGCACATGTATACCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPNALPH*AHVYRF Trigger: GAAACGGTATACATGTGCTCAGTGTGGCAAAGCGTT...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR GCA 90 bp | GTTTATTCTCTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATTCATAAACCGTGACTaGAGGATGACTCTCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: VYSLISVLYSRDDSHLQSFINRD*RMTLPI Trigger: AATGGGGAGAGTCATCCTGCAGTCACGGTTTATGAA...TGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAGAGAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR CCA 90 bp | CTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATACTTAAATCACAACTGTTCTCTGTaGCAGGAACACTCTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LISVLYSRDDSHLQSYLNHNCSL*QEHSQV Trigger: CACTTGAGAGTGTTCCTGCCACAGAGAACAGTTGTG...ATTTAAGTATGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR CCA 90 bp | GTTTATTCTCTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCAGATTACGACGGGCCATaGAATACAGGAAAGTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VYSLISVLYSRDDSHLQSDYDGP*NTGKFH Trigger: GTGAAACTTTCCTGTATTCCATGGCCCGTCGTAATC...TGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAGAGAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR CCA 90 bp | TGTAGTGTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGGATTATGACAGGCCATaGAATACAGGAAAGTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: CSVEGFSDNPLLFVSFLLDYDRP*NTGKFH Trigger: GTGAAACTTTCCTGTATTCCATGGCCTGTCATAATC...CAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAACACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATGGAGATCAGGTTCATaGAGGTTTCCATCATCACAT | + |
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Preference number: 4 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPWRSGS*RFPSSH Trigger: ATGTGATGATGGAAACCTTCATGAACCTGATCTCCA...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATTTTCCACGAGTTCCTaGCATCTGTATGGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPFSTSS*HLYGFS Trigger: AGAGAAACCATACAGATGTCAGGAACTCGTGGAAAA...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | TTTCATGATCCACTGGCGTGCCAATGGTTACTCTTATTTTTAGGAATTTCTGTAGGTTTCTCTTCATTTTaGCCTCTAAGGAGCACATCT | + |
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Preference number: 4 (lower is better) Translates to: FHDPLACQWLLLFLGISVGFSSF*PLRSTS Trigger: AGATGTGCTCCTTAGAGGTCAAAATGAAGAGAAACC...TACAGAAATTCCTAAAAATAAGAGTAACCATTGGCACGCCAGTGGATCATGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | ACACGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCAATTCTTTCATGTTTGTaGAGGTTTGAGGACCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TRGGNCTDKFYIMPSLSPILSCL*RFEDRL Trigger: TAGACGGTCCTCAAACCTTCACAAACATGAAAGAAT...TGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| 3UTR CAA 72 bp | CTACCATGTCATAGACTGAGCTTTGAATACCACCCATaGTCTAAAACATGTTTATCTACAAGTTACTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPCHRLSFEYHP*SKTCLSTSYCP Trigger: TGGGCAGTAACTTGTAGATAAACATGTTTTAGACAATGGGTGGTATTCAAAGCTCAGTCTATGACATGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | TTTCATGATCCACTGGCGTGCCAATGGTTACTCTTATTTTTAGGAATTTCTGTACGTCTTTCATGCTTTTaGAGGTATGAGGAACATGTA | + |
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Preference number: 4 (lower is better) Translates to: FHDPLACQWLLLFLGISVRLSCF*RYEEHV Trigger: TACATGTTCCTCATACCTTCAAAAGCATGAAAGACG...TACAGAAATTCCTAAAAATAAGAGTAACCATTGGCACGCCAGTGGATCATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS-3UTR TCA 90 bp | CTCATCTCAGTTTTATACAGCAGGGATGACAGTCATTTGCAGTCATACTTAAATAGGATTCAGAATAGGTaGCGTCTTTCCAACATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LISVLYSRDDSHLQSYLNRIQNR*RLSNIF Trigger: AAAAATGTTGGAAAGACGTCACCTATTCTGAATCCT...ATTTAAGTATGACTGCAAATGACTGTCATCCCTGCTGTATAAAACTGAGATGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS GCA 90 bp | ACCATTGATGTCTTTTACATTCACACTGCTTTCATAAACCGTGACTaGAGGATGACTCTCCCCATTAACAATATGCTCTGTCATCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TIDVFYIHTAFINRD*RMTLPINNMLCHLL Trigger: CAACAGATGACAGAGCATATTGTTAATGGGGAGAGTCATCCTGCAGTCACGGTTTATGAAAGCAGTGTGAATGTAAAAGACATCAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS GCA 72 bp | GTCTTTTACATTCACACTGCTTTCATAAACCGTGACTaGAGGATGACTCTCCCCATTAACAATATGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VFYIHTAFINRD*RMTLPINNMLC Trigger: ACAGAGCATATTGTTAATGGGGAGAGTCATCCTGCAGTCACGGTTTATGAAAGCAGTGTGAATGTAAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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| CDS CCA 72 bp | ATTCATAGGTCTGTGTATTTTCACAACTGTTCTCTGTaGCAGGAACACTCTCAAGTGTATGGAAGGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: IHRSVYFHNCSL*QEHSQVYGRIQ Trigger: CTGAATCCTTCCATACACTTGAGAGTGTTCCTGCCACAGAGAACAGTTGTGAAAATACACAGACCTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099414.5 |
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