Pregenerated sensors for ZFP955A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094441Ensembl transcript IDs: ENSMUST00000008830.10
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAGGATCTGAGCTCCATCACTGGGACTCACATAACGAAAATATaGGAACTGAATCCAGAAAGCTGTCTGCTGCTCCCCATATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: TEDLSSITGTHITKI*ELNPESCLLLPICP Trigger: TGGACATATGGGGAGCAGCAGACAGCTTTCTGGATTCAGTTCTCATATTTTCGTTATGTGAGTCCCAGTGATGGAGCTCAGATCCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTAAGGTAAACCACTCTTaGGCCATCTTTCAAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTKVNHS*AIFQAS Trigger: TGAGGCTTGAAAGATGGCTCAAGAGTGGTTTACCTT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTATCCCTGGAGCTCTGACCTGCCTAACTCTTTCTTCCCAAGTGGTGGAAACCACATGGATGATGTaGCTTGAACCCAGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSIPGALTCLTLSSQVVETTWMM*LEPRSS Trigger: AGAGGACCTGGGTTCAAGTCACATCATCCATGTGGT...TTCCACCACTTGGGAAGAAAGAGTTAGGCAGGTCAGAGCTCCAGGGATACTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTATGGGTTTCTTTCCATaGCCGAGATTTTTCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTMGFFP*PRFFMP Trigger: AGGCATGAAAAATCTCGGTCATGGAAAGAAACCCAT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTATCCCTGGAGCTCTGACCTGCCTAACTCTTTCTTCCCAAGTGGTGGAAAAGCAAGTTAAATGCTaGTGGGATGGCTTAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSIPGALTCLTLSSQVVEKQVKC*WDGLEG Trigger: CCCTTCTAAGCCATCCCATCAGCATTTAACTTGCTT...TTCCACCACTTGGGAAGAAAGAGTTAGGCAGGTCAGAGCTCCAGGGATACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTGATTTTTCATGCCTTTaGAAGTGTAAGAAGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTDFSCL*KCKKHA Trigger: TGCATGCTTCTTACACTTTCAAAGGCATGAAAAATC...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTCACATAACGAAAATATaGGAACTGAATCCAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTHITKI*ELNPES Trigger: GCTTTCTGGATTCAGTTCTCATATTTTCGTTATGTG...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATCTGAGACTGAGGATCTaGGCTCCATCACTGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: HVGEIVLISFILCPVYLHLRLRI*APSLGL Trigger: GAGTCCCAGTGATGGAGCTCAGATCCTCAGTCTCAG...ATGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATGAGTCACCACATGGATaGTGTGACTTGAACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HVGEIVLISFILCPVYLHESPHG*CDLNPG Trigger: ACCTGGGTTCAAGTCACATCATCCATGTGGTGACTC...ATGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | TACACAGGTACAAGTTCTACCCAATGGGTTTCTTTCCATGACCGAGATTTTTCAGTTCTCTCATGTATTTaGAGGAATTTGGAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: YTGTSSTQWVSFHDRDFSVLSCI*RNLEKV Trigger: CACCTTTTCCAAATTCCTTCAAATACATGAGAGAAC...TGAAAAATCTCGGTCATGGAAAGAAACCCATTGGGTAGAACTTGTACCTGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATGTCTCAAAACCAAGTTaGCTAGTTACACATAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: HVGEIVLISFILCPVYLHVSKPS*LVTHSL Trigger: TAAGCTATGTGTAACTAGTCAACTTGGTTTTGAGAC...ATGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR TCA 72 bp | CCAGGTCCTCTGCAAGCACAGAAGGTAAACCACTCTTaGGCCATCTTTCAAGCCTCAACTATCTATGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: PGPLQAQKVNHS*AIFQASTIYEV Trigger: AACCTCATAGATAGTTGAGGCTTGAAAGATGGCTCAAGAGTGGTTTACCTTCTGTGCTTGCAGAGGACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR GCA 72 bp | AACTCTTTCTTCCCAAGTGGTGGAATTAAAGGTGTGTaGCAGCACACTTGGATCTCTCATGTTTTCACAGTA | + |
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Preference number: 3 (lower is better) Translates to: NSFFPSGGIKGV*QHTWISHVFTV Trigger: TACTGTGAAAACATGAGAGATCCAAGTGTGCTGGCACACACCTTTAATTCCACCACTTGGGAAGAAAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR CCA 72 bp | CCAAGTGGTGGAATTAAAGGTGTGTGCCAGCACACTTaGATCTCTCATGTTTTCACAGTAACCACTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: PSGGIKGVCQHT*ISHVFTVTTEF Trigger: AAATTCAGTGGTTACTGTGAAAACATGAGAGATCCAAGTGTGCTGGCACACACCTTTAATTCCACCACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR-3UTR CAA 90 bp | CATGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATGAAGGTAAACCACTCTaGAGCCATCTTTCAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HVGEIVLISFILCPVYLHEGKPL*SHLSSL Trigger: GAGGCTTGAAAGATGGCTCAAGAGTGGTTTACCTTC...ATGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR TCA 90 bp | CTAAGTATCCCTGGAGCTCTGACCTGCCTAACTCTTTCTTCCCAAGTGGTGGAAGAGCACCCGGATGGGTaGAGGCTTTCCCACAATATT | + |
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Preference number: 4 (lower is better) Translates to: LSIPGALTCLTLSSQVVEEHPDG*RLSHNI Trigger: AATATTGTGGGAAAGCCTTCACCCATCCGGGTGCTC...TTCCACCACTTGGGAAGAAAGAGTTAGGCAGGTCAGAGCTCCAGGGATACTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR TCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTATTCTTTCATGTCTGTaGAGGTTTGAGGACCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTILSCL*RFEDRL Trigger: TAGACGGTCCTCAAACCTTCACAGACATGAAAGAAT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR TCA 90 bp | CTAAGTATCCCTGGAGCTCTGACCTGCCTAACTCTTTCTTCCCAAGTGGTGGAAACCTTGACTGCAGGATaGCTCTCCCCATTAACAATA | + |
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Preference number: 4 (lower is better) Translates to: LSIPGALTCLTLSSQVVETLTAG*LSPLTI Trigger: TATTGTTAATGGGGAGAGTCATCCTGCAGTCAAGGT...TTCCACCACTTGGGAAGAAAGAGTTAGGCAGGTCAGAGCTCCAGGGATACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CCA 90 bp | CTCCCCATATGTCCACTGAGGCATGAGTGTATTCTTGCCCCAAACCTCATGCAAGATCACGACAGGCCTTaGAATACAGGAAAGTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LPICPLRHECILAPNLMQDHDRP*NTGKFH Trigger: GTGAAACTTTCCTGTATTCCAAGGCCTGTCGTGATC...TTGCATGAGGTTTGGGGCAAGAATACACTCATGCCTCAGTGGACATATGGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR GCA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTAAGGCTTCTCCACATTaGTTATACTCAAGTGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTKASPH*LYSSGF Trigger: AAAACCACTTGAGTATAAGCAATGTGGAGAAGCCTT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CCA 90 bp | TACACAGGTACAAGTTCTACCCAATGGGTTTCTTTCCATGACCGAGATTTTTCAGTCCTCAAAGGTCACTaGACCCATCTTCTGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: YTGTSSTQWVSFHDRDFSVLKGH*THLLLP Trigger: CGGAAGCAGAAGATGGGTCCAGTGACCTTTGAGGAC...TGAAAAATCTCGGTCATGGAAAGAAACCCATTGGGTAGAACTTGTACCTGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| 3UTR CAA 72 bp | CCAAGTGCTATCTTCATGACTCATGTGCTAAGAAGATaGTCCCCTGACATCCAAATGAACACTTGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: PSAIFMTHVLRR*SPDIQMNTWDP Trigger: TGGGTCCCAAGTGTTCATTTGGATGTCAGGGGACAATCTTCTTAGCACATGAGTCATGAAGATAGCACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR TCA 90 bp | ATGACTCATGTGCTAAGAAGATTGTCCCCTGACATCCAAATGAACACTTGGGACATGCTTTTGAAGGTATaGGGAAAGTGTAAACCCTTT | + |
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Preference number: 4 (lower is better) Translates to: MTHVLRRLSPDIQMNTWDMLLKV*GKCKPF Trigger: AAAGGGTTTACACTTTCCTCATACCTTCAAAAGCAT...GTCCCAAGTGTTCATTTGGATGTCAGGGGACAATCTTCTTAGCACATGAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR GCA 90 bp | CATGTGGGGGAAATTGTACTGATAAGTTTTATATTATGCCCAGTCTATCTCCATGTTGATAAGAATGAATaGATGCTTTCCCACAATACT | + |
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Preference number: 4 (lower is better) Translates to: HVGEIVLISFILCPVYLHVDKNE*MLSHNT Trigger: AGTATTGTGGGAAAGCATGCATTCATTCTTATCAAC...ATGGAGATAGACTGGGCATAATATAAAACTTATCAGTACAATTTCCCCCACATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTATGCTCTGTCATCTGTaGGTGAGTCTTTCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTMLCHL*VSLSTL Trigger: CAGTGTGGAAAGACTCACCAACAGATGACAGAGCAT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTAAAGGCTTCTCCACATaGCTTATACTCAAGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTKGFST*LILKWF Trigger: AAACCACTTGAGTATAAGCAATGTGGAGAAGCCTTT...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | CTCCCCATATGTCCACTGAGGCATGAGTGTATTCTTGCCCCAAACCTCATGCAATGGTTTCTCTTCATTTaGACCTCTAAGGAGCACATC | + |
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Preference number: 5 (lower is better) Translates to: LPICPLRHECILAPNLMQWFLFI*TSKEHI Trigger: GATGTGCTCCTTAGAGGTCAAAATGAAGAGAAACCA...TTGCATGAGGTTTGGGGCAAGAATACACTCATGCCTCAGTGGACATATGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | TGCGATGTTCAGAGCCCAGCAGAGGGTGTCAGATCACCAGGAACTGGAGTTACTTTCATGCTGAAGAAGTaGATAAGAATGAATGCATGC | + |
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Preference number: 5 (lower is better) Translates to: CDVQSPAEGVRSPGTGVTFMLKK*IRMNAC Trigger: GCATGCATTCATTCTTATCAACTTCTTCAGCATGAA...AGTAACTCCAGTTCCTGGTGATCTGACACCCTCTGCTGGGCTCTGAACATCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | ATGACTCATGTGCTAAGAAGATTGTCCCCTGACATCCAAATGAACACTTGGGACTCATGGTTGGAACAGTaGCCCTCACTGATAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: MTHVLRRLSPDIQMNTWDSWLEQ*PSLIKA Trigger: GGCCTTTATCAGTGAGGGCAACTGTTCCAACCATGA...GTCCCAAGTGTTCATTTGGATGTCAGGGGACAATCTTCTTAGCACATGAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS CCA 90 bp | ACAGAATTTCTCAACCACCTGAATTCTCGAGTTTCTCTGGAGCTGTaGGTAGTTCACATCCATACTTTCTTCCTCTGTCTTCCCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: TEFLNHLNSRVSLEL*VVHIHTFFLCLPYG Trigger: TCCATAGGGAAGACAGAGGAAGAAAGTATGGATGTGAACTACCCACAGCTCCAGAGAAACTCGAGAATTCAGGTGGTTGAGAAATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS-3UTR CAA 90 bp | ATGACTCATGTGCTAAGAAGATTGTCCCCTGACATCCAAATGAACACTTGGGACTCTGTAGAGCTTCTTTaGGTAAGAATCCAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: MTHVLRRLSPDIQMNTWDSVELL*VRIQQS Trigger: GCTCTGCTGGATTCTTACCAAAAGAAGCTCTACAGA...GTCCCAAGTGTTCATTTGGATGTCAGGGGACAATCTTCTTAGCACATGAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS GCA 90 bp | ACCATTGATGTCTTTTACATTCACACTGCTTTCATAAACCTTGACTaGAGGATGACTCTCCCCATTAACAATATGCTCTGTCATCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TIDVFYIHTAFINLD*RMTLPINNMLCHLL Trigger: CAACAGATGACAGAGCATATTGTTAATGGGGAGAGTCATCCTGCAGTCAAGGTTTATGAAAGCAGTGTGAATGTAAAAGACATCAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS CAA 90 bp | GACTGCAGGATGACTCTCCCCATTAACAATATGCTCTGTCATCTGTaGGTGAGTCTTTCCACACTGACTGCTATGTTCATAGTCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: DCRMTLPINNMLCHL*VSLSTLTAMFIVTE Trigger: TTCTGTGACTATGAACATAGCAGTCAGTGTGGAAAGACTCACCAACAGATGACAGAGCATATTGTTAATGGGGAGAGTCATCCTGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS CAA 72 bp | ATGACTCTCCCCATTAACAATATGCTCTGTCATCTGTaGGTGAGTCTTTCCACACTGACTGCTATGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: MTLPINNMLCHL*VSLSTLTAMFI Trigger: TATGAACATAGCAGTCAGTGTGGAAAGACTCACCAACAGATGACAGAGCATATTGTTAATGGGGAGAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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| CDS GCA 72 bp | GTCTTTTACATTCACACTGCTTTCATAAACCTTGACTaGAGGATGACTCTCCCCATTAACAATATGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VFYIHTAFINLD*RMTLPINNMLC Trigger: ACAGAGCATATTGTTAATGGGGAGAGTCATCCTGCAGTCAAGGTTTATGAAAGCAGTGTGAATGTAAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008830.10 |
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