Pregenerated sensors for ZFP954 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062116Ensembl transcript IDs: ENSMUST00000056246.8
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAAAACACTTATGGTCCGATCAGAGCCTATCCCAGGATCCAAGGGATGCATCCAGGTGTTCATGGAGATaGATAAGGGACCTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RKHLWSDQSLSQDPRDASRCSWR*IRDLFP Trigger: GGGGAAGAGGTCCCTTATTCATCTCCATGAACACCT...GGATGCATCCCTTGGATCCTGGGATAGGCTCTGATCGGACCATAAGTGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCACTCTCAGAACTTCTCCTTAAGGTCAGGTTCAACCCTAGGGCTGAAGGCTCTCTACAAACTCTaGACCCAGAGACCTATGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGHSQNFSLRSGSTLGLKALYKL*TQRPMQ Trigger: CTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGC...CTTCAGCCCTAGGGTTGAACCTGACCTTAAGGAGAAGTTCTGAGAGTGGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR TCA 72 bp | CCTATCCCAGGATCCAAGGGATGCATCCTAGTCCAGTaGCCGCTCTGCTTTTATGGGCTAGAGGTGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PIPGSKGCILVQ*PLCFYGLEVWL Trigger: CAGCCACACCTCTAGCCCATAAAAGCAGAGCGGTCACTGGACTAGGATGCATCCCTTGGATCCTGGGATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR GCA 72 bp | GGTTTGCCAGCGGCTGAAGCTGCTCTCTACAAACTCTaGACCCAGAGACCTATGCAGGGTGTGCGTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: GLPAAEAALYKL*TQRPMQGVRVV Trigger: AACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGCAGCTTCAGCCGCTGGCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR GCA 72 bp | TCCTTAAGGTCAGGTTCAACCCTAGGGCTGAAGGTTTaGCAGCGGCTGAAGCTGCTCTCTACAAACTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SLRSGSTLGLKV*QRLKLLSTNSA Trigger: TGCAGAGTTTGTAGAGAGCAGCTTCAGCCGCTGGCAAACCTTCAGCCCTAGGGTTGAACCTGACCTTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR CCA 72 bp | AGTCAAGAACACAGAGCTCAGTCTCCCGGAGCTCCCTaGTGTCAACTCCTGGGTAACAGAAAGATGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SQEHRAQSPGAP*CQLLGNRKMTA Trigger: TGCTGTCATCTTTCTGTTACCCAGGAGTTGACACCAGGGAGCTCCGGGAGACTGAGCTCTGTGTTCTTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR CCA 72 bp | ACCACTCCGTTCCCCCGTCATCCAAACTCAGCAGCATaGAAACTGCACTCTGTGAAGTCAAGAACACAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TTPFPRHPNSAA*KLHSVKSRTQS Trigger: GCTCTGTGTTCTTGACTTCACAGAGTGCAGTTTCCATGCTGCTGAGTTTGGATGACGGGGGAACGGAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR TCA 72 bp | GTCATCCAAACTCAGCAGCATGGAAACTGCACTCTGTaGAGTCAAGAACACAGAGCTCAGTCTCCCGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: VIQTQQHGNCTL*SQEHRAQSPGA Trigger: AGCTCCGGGAGACTGAGCTCTGTGTTCTTGACTTCACAGAGTGCAGTTTCCATGCTGCTGAGTTTGGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR TCA 72 bp | GAGCTCCCTGGTGTCAACTCCTGGGTAACAGAAAGATaGCAGCAGTCCTCATCATGTTCCAGTATACCTACT | + |
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Preference number: 3 (lower is better) Translates to: ELPGVNSWVTER*QQSSSCSSIPT Trigger: AGTAGGTATACTGGAACATGATGAGGACTGCTGTCATCTTTCTGTTACCCAGGAGTTGACACCAGGGAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR CCA 72 bp | ATGCAGGGTGTGCGTGTTGTTTTCAGAAAACACTTATaGTCCGATCAGAGCCTATCCCAGGATCCAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: MQGVRVVFRKHL*SDQSLSQDPRD Trigger: ATCCCTTGGATCCTGGGATAGGCTCTGATCGGACCATAAGTGTTTTCTGAAAACAACACGCACACCCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR GCA 72 bp | TCTACAAACTCTGCACCCAGAGACCTATGCAGGGTGTaGGTGTTGTTTTCAGAAAACACTTATGGTCCGATC | + |
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Preference number: 3 (lower is better) Translates to: STNSAPRDLCRV*VLFSENTYGPI Trigger: GATCGGACCATAAGTGTTTTCTGAAAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR GCA 72 bp | AAGCTGCTCTCTACAAACTCTGCACCCAGAGACCTATaGAGGGTGTGCGTGTTGTTTTCAGAAAACACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KLLSTNSAPRDL*RVCVLFSENTY Trigger: ATAAGTGTTTTCTGAAAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGATTTCAGGTGTTCATGGAGATGAATAAGGGACCTCTTCCCCTCATGGGCTCCAGAGGATGGTaGGGCCCTGGGAAGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRFQVFMEMNKGPLPLMGSRGW*GPGKSP Trigger: TGGCGACTTCCCAGGGCCCCACCATCCTCTGGAGCC...CATGAGGGGAAGAGGTCCCTTATTCATCTCCATGAACACCTGAAATCTCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CCA 90 bp | GGAAGCTTCAGTAGCTGTGTCTCACAAAGGCCACTCTCAGAACTTCTCCTTAAGTCGGGCTCCAGAGGATaGTGGGGCCCTGGGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: GSFSSCVSQRPLSELLLKSGSRG*WGPGKS Trigger: CGACTTCCCAGGGCCCCACCATCCTCTGGAGCCCGA...CTTAAGGAGAAGTTCTGAGAGTGGCCTTTGTGAGACACAGCTACTGAAGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR CAA 72 bp | CTCCTTAAGGTCAGGTTCAACCCTAGGGCTGAAGGTTaGCCAGCGGCTGAAGCTGCTCTCTACAAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLKVRFNPRAEG*PAAEAALYKLC Trigger: GCAGAGTTTGTAGAGAGCAGCTTCAGCCGCTGGCAAACCTTCAGCCCTAGGGTTGAACCTGACCTTAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | GTCTCACAAAGGCCACTCTCAGAACTTCTCCTTAAGGTCAGGTTCAACCCTAGGAAGTCACCTGATGCCTaGGAAGGCCCGAGGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VSQRPLSELLLKVRFNPRKSPDA*EGPRRS Trigger: AGACCTCCTCGGGCCTTCTCAGGCATCAGGTGACTT...CCTAGGGTTGAACCTGACCTTAAGGAGAAGTTCTGAGAGTGGCCTTTGTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR GCA 90 bp | AAACTGCACTCTGTGAAGTCAAGAACACAGAGCTCAGTCTCCCGGAGCTCCCTGCACAGCATGTGCTGTTaGAGTGTGGACGGACTGACA | + |
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Preference number: 4 (lower is better) Translates to: KLHSVKSRTQSSVSRSSLHSMCC*SVDGLT Trigger: TGTCAGTCCGTCCACACTGCAACAGCACATGCTGTG...CAGGGAGCTCCGGGAGACTGAGCTCTGTGTTCTTGACTTCACAGAGTGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR GCA 90 bp | GTCAAGAACACAGAGCTCAGTCTCCCGGAGCTCCCTGGTGTCAACTCCTGGGTATGCTCCTGTACGATTTaGCACATTCACTACACTCAA | + |
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Preference number: 4 (lower is better) Translates to: VKNTELSLPELPGVNSWVCSCTI*HIHYTQ Trigger: TTGAGTGTAGTGAATGTGGCAAATCGTACAGGAGCA...TACCCAGGAGTTGACACCAGGGAGCTCCGGGAGACTGAGCTCTGTGTTCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | CTGCTCTCTACAAACTCTGCACCCAGAGACCTATGCAGGGTGTGCGTGTTGTTTTTCTTCTTCTCACTCTaGATGGCCTCTCCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSTNSAPRDLCRVCVLFFFFSL*MASPLS Trigger: TGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAA...AAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | CCTATGCAGGGTGTGCGTGTTGTTTTCAGAAAACACTTATGGTCCGATCAGAGCCACACTCGTTGCACTTaGAAGGCTTGCCGTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PMQGVRVVFRKHLWSDQSHTRCT*KACREL Trigger: CAGTTCACGGCAAGCCTTTCAAGTGCAACGAGTGTG...GCTCTGATCGGACCATAAGTGTTTTCTGAAAACAACACGCACACCCTGCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| 3UTR CAA 72 bp | AACTCTGCACCCAGAGACCTATGCAGGGTGTGCGTGTaGTTTTCAGAAAACACTTATGGTCCGATCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSAPRDLCRVCV*FSENTYGPIRA Trigger: GGCTCTGATCGGACCATAAGTGTTTTCTGAAAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | TGTTCCAGTATACCTACTAGAGCAGGAAGCTTCAGTAGCTGTGTCTCACAAAGGGAAAGGCTTTTTGGCTaGAGGACTTGCCACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSIPTRAGSFSSCVSQRERLFG*RTCHTR Trigger: CCGAGTGTGGCAAGTCCTTCAGCCAAAAAGCCTTTC...CCTTTGTGAGACACAGCTACTGAAGCTTCCTGCTCTAGTAGGTATACTGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR GCA 90 bp | AGAGCCTATCCCAGGATCCAAGGGATGCATCCTAGTCCAGTGACCGCTCTGCTTCACAGTAAGTGCATTTaGAGTTCTTCTTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAYPRIQGMHPSPVTALLHSKCI*SSSSHS Trigger: AGAGTGAGAAGAAGAACTGCAAATGCACTTACTGTG...AAGCAGAGCGGTCACTGGACTAGGATGCATCCCTTGGATCCTGGGATAGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTATACCTACTAGAGCAGGAAGCTTCAGTAGCTGTGTCTCACAAAGGACGCAGCCCTCTTCCTaGTTGGCAGGTTTCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: CSSIPTRAGSFSSCVSQRTQPSS*LAGFTE Trigger: TTCAGTGAAACCTGCCAACCAGGAAGAGGGCTGCGT...CCTTTGTGAGACACAGCTACTGAAGCTTCCTGCTCTAGTAGGTATACTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | CTGCTCTCTACAAACTCTGCACCCAGAGACCTATGCAGGGTGTGCGTGTTGTTTTTTCACTCTCCACTTTaGTCCAACAACCTGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: LLSTNSAPRDLCRVCVLFFHSPL*SNNLSI Trigger: TATGGACAGGTTGTTGGATCAAAGTGGAGAGTGAAA...AAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGCAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGATTTCAGGTGTTCATGGAGATGAATAAGGGACCTCTTCCCCTCATGAGCCCTCTTCCTGGTTaGCAGGTTTCACTGAATACT | + |
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Preference number: 4 (lower is better) Translates to: LLRFQVFMEMNKGPLPLMSPLPG*QVSLNT Trigger: AGTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCT...CATGAGGGGAAGAGGTCCCTTATTCATCTCCATGAACACCTGAAATCTCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCCACTCTCAGAACTTCTCCTTAAGGTCAGGTTCAACCCTAGGGCTGAAGAAGTTCAAGTCTCAGTaGAGACACCAGTGTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: KGHSQNFSLRSGSTLGLKKFKSQ*RHQCED Trigger: ATCTTCACACTGGTGTCTTCACTGAGACTTGAACTT...CTTCAGCCCTAGGGTTGAACCTGACCTTAAGGAGAAGTTCTGAGAGTGGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | CAGAAAACACTTATGGTCCGATCAGAGCCTATCCCAGGATCCAAGGGATGCATCAGATTCCACCTGAGTTaGATCATGAATCCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QKTLMVRSEPIPGSKGCIRFHLS*IMNPRK Trigger: CTTTCTGGGATTCATGATTCAACTCAGGTGGAATCT...GATGCATCCCTTGGATCCTGGGATAGGCTCTGATCGGACCATAAGTGTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR TCA 90 bp | GACCTATGCAGGGTGTGCGTGTTGTTTTCAGAAAACACTTATGGTCCGATCAGAGGGAGATATTATGCTTaGAGGCTTTGCCACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: DLCRVCVLFSENTYGPIRGRYYA*RLCHTH Trigger: GTGAGTGTGGCAAAGCCTTCAAGCATAATATCTCCC...TCTGATCGGACCATAAGTGTTTTCTGAAAACAACACGCACACCCTGCATAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCTTCAGTAGCTGTGTCTCACAAAGGCCACTCTCAGAACTTCTCCTTAATAAGGGAGATATTATaGTTGAAGGCTTTGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: QEASVAVSHKGHSQNFSLIREIL*LKALPH Trigger: GTGTGGCAAAGCCTTCAAGCATAATATCTCCCTTAT...TAAGGAGAAGTTCTGAGAGTGGCCTTTGTGAGACACAGCTACTGAAGCTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CCA 90 bp | CATGTTCCAGTATACCTACTAGAGCAGGAAGCTTCAGTAGCTGTGTCTCACAAAATGAGCTCGGAGTTCTaGGTGAAATACATGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: HVPVYLLEQEASVAVSHKMSSEF*VKYMPH Trigger: ATGTGGCATGTATTTCACCCAGAACTCCGAGCTCAT...TTTGTGAGACACAGCTACTGAAGCTTCCTGCTCTAGTAGGTATACTGGAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR GCA 90 bp | TCATCATGTTCCAGTATACCTACTAGAGCAGGAAGCTTCAGTAGCTGTGTCTCATCTTGCCACAGTAAGTaGATTTGCAGTTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSCSSIPTRAGSFSSCVSSCHSK*ICSSSS Trigger: AGAAGAAGAACTGCAAATGCACTTACTGTGGCAAGA...TGAGACACAGCTACTGAAGCTTCCTGCTCTAGTAGGTATACTGGAACATGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 90 bp | CAGCCCTCTTCCTGGTTGGCAGGTTTCACTGAATACTGGGAAACCTaGGGCAGGGCTCCACCCGCAGCCTCCACAATCACCATCGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QPSSWLAGFTEYWET*GRAPPAASTITIGL Trigger: GAGCCCGATGGTGATTGTGGAGGCTGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS GCA 90 bp | ACATTGTCCGTGCTTAGCACGGGTGTCTCAGCACAGCACAGCATGTaGTGTTGCAGTGTGGACGGACTGACACCTCCTTCTGTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: TLSVLSTGVSAQHSM*CCSVDGLTPPSVDR Trigger: CCTGTCCACAGAAGGAGGTGTCAGTCCGTCCACACTGCAACAGCACATGCTGTGCTGTGCTGAGACACCCGTGCTAAGCACGGACAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 90 bp | TCTTGCCACAGTAAGTGCATTTGCAGTTCTTCTTCTCACTCTGAATaGCCTCTCCACTCTCAGTGTTCGTGGGGGTGTCCCCACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: SCHSKCICSSSSHSE*PLHSQCSWGCPHHW Trigger: CCAGTGGTGGGGACACCCCCACGAACACTGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAACTGCAAATGCACTTACTGTGGCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | AAACTGCACTCTGTGAAGTCAAGAACACAGAGCTCAGTCTCCCGGAGCTCCCTGCAGCCCTCTTCCTGGTaGGCAGGTTTCACTGAATAC | + |
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Preference number: 5 (lower is better) Translates to: KLHSVKSRTQSSVSRSSLQPSSW*AGFTEY Trigger: GTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCTG...CAGGGAGCTCCGGGAGACTGAGCTCTGTGTTCTTGACTTCACAGAGTGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | GCTCTCTACAAACTCTGCACCCAGAGACCTATGCAGGGTGTGCGTGTTGTTTTCACTCGTCCACACTCGTaGCACTTGAAAGGCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: ALYKLCTQRPMQGVRVVFTRPHS*HLKGLP Trigger: CGGCAAGCCTTTCAAGTGCAACGAGTGTGGACGAGT...GAAAACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | AGAGCCTATCCCAGGATCCAAGGGATGCATCCTAGTCCAGTGACCGCTCTGCTTAAGATTCCACCTGAGTaGAATCATGAATCCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RAYPRIQGMHPSPVTALLKIPPE*NHESQK Trigger: TTTCTGGGATTCATGATTCAACTCAGGTGGAATCTT...AAGCAGAGCGGTCACTGGACTAGGATGCATCCCTTGGATCCTGGGATAGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | AGAAAACACTTATGGTCCGATCAGAGCCTATCCCAGGATCCAAGGGATGCATCCTGCACGCATACTGCTTaGCTACAACGTGCACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKHLWSDQSLSQDPRDASCTHTA*LQRALS Trigger: TGAAAGTGCACGTTGTAGCAAAGCAGTATGCGTGCA...GGATGCATCCCTTGGATCCTGGGATAGGCTCTGATCGGACCATAAGTGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | CATGTTCCAGTATACCTACTAGAGCAGGAAGCTTCAGTAGCTGTGTCTCACAAACTGGTACAGGAGCCTTaGAGAGTCATCGAGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: HVPVYLLEQEASVAVSHKLVQEP*RVIEQC Trigger: ACACTGCTCGATGACTCTCAAAGGCTCCTGTACCAG...TTTGTGAGACACAGCTACTGAAGCTTCCTGCTCTAGTAGGTATACTGGAACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | GTCTCACAAAGGCCACTCTCAGAACTTCTCCTTAAGGTCAGGTTCAACCCTAGGAGGGAGATATTATGCTaGAAGGCTTTGCCACACTCA | + |
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Preference number: 5 (lower is better) Translates to: VSQRPLSELLLKVRFNPRREILC*KALPHS Trigger: TGAGTGTGGCAAAGCCTTCAAGCATAATATCTCCCT...CCTAGGGTTGAACCTGACCTTAAGGAGAAGTTCTGAGAGTGGCCTTTGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS TCA 90 bp | GAATTGAAGACTCGTCCACACTCGTTGCACTTGAAAGGCTTGCCGTaGACTGTTAGATGTTCAATGAGCTCGGAGTTCTGGGTGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: ELKTRPHSLHLKGLP*TVRCSMSSEFWVKY Trigger: GTATTTCACCCAGAACTCCGAGCTCATTGAACATCTAACAGTTCACGGCAAGCCTTTCAAGTGCAACGAGTGTGGACGAGTCTTCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCCTGCTGAGATTTCAGGTGTTCATGGAGATGAATAAGGGACCTCTTCCCGTTTCACTCTCCACTTaGATCCAACAACCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: FLLLRFQVFMEMNKGPLPVSLST*IQQPVH Trigger: ATGGACAGGTTGTTGGATCAAAGTGGAGAGTGAAAC...GGGAAGAGGTCCCTTATTCATCTCCATGAACACCTGAAATCTCAGCAGGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGAAAACACTTATGGTCCGATCAGAGCCTATCCCAGGATCCAAGGGATCTGCTCCTGTACGATTaGCCACATTCACTACACTCA | + |
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Preference number: 5 (lower is better) Translates to: VFRKHLWSDQSLSQDPRDLLLYD*PHSLHS Trigger: TGAGTGTAGTGAATGTGGCAAATCGTACAGGAGCAG...ATCCCTTGGATCCTGGGATAGGCTCTGATCGGACCATAAGTGTTTTCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS-3UTR CAA 90 bp | CTTAGTAAAAAGAGAATTCATGTCTCATTATTAAACCACTCCGTTCCCCCGTCAACCTTAAGGCCTTCTTaGCTCCTGTACGATTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LSKKRIHVSLLNHSVPPSTLRPS*LLYDFP Trigger: TGGGAAATCGTACAGGAGCAAAGAAGGCCTTAAGGT...TGACGGGGGAACGGAGTGGTTTAATAATGAGACATGAATTCTCTTTTTACTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 72 bp | CAGCCCTCTTCCTGGTTGGCAGGTTTCACTGAATACTaGGAAACCTGGGGCAGGGCTCCACCCGCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QPSSWLAGFTEY*ETWGRAPPAAS Trigger: GGAGGCTGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 72 bp | TCCTGGTTGGCAGGTTTCACTGAATACTGGGAAACCTaGGGCAGGGCTCCACCCGCAGCCTCCACAATCACC | + |
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Preference number: 6 (lower is better) Translates to: SWLAGFTEYWET*GRAPPAASTIT Trigger: GGTGATTGTGGAGGCTGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 72 bp | TCTCACTCTGAATGGCCTCTCCACTCTCAGTGTTCGTaGGGGTGTCCCCACCACTGGAAGTCACCTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SHSEWPLHSQCS*GCPHHWKSPDA Trigger: GGCATCAGGTGACTTCCAGTGGTGGGGACACCCCCACGAACACTGAGAGTGGAGAGGCCATTCAGAGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS GCA 72 bp | GTGCTTAGCACGGGTGTCTCAGCACAGCACAGCATGTaGTGTTGCAGTGTGGACGGACTGACACCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VLSTGVSAQHSM*CCSVDGLTPPS Trigger: AGAAGGAGGTGTCAGTCCGTCCACACTGCAACAGCACATGCTGTGCTGTGCTGAGACACCCGTGCTAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CCA 72 bp | CCACATCCTCAAAGGACACGCAGCCCTCTTCCTGGTTaGCAGGTTTCACTGAATACTGGGAAACCTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PHPQRTRSPLPG*QVSLNTGKPGA Trigger: TGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCTGCGTGTCCTTTGAGGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS TCA 72 bp | TCCCAGAAAGTTCAAGTCTCAGTGAAGACACCAGTGTaGAGATCTCCGTCATCACAGTCTGGTACAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SQKVQVSVKTPV*RSPSSQSGTGA Trigger: GGCTCCTGTACCAGACTGTGATGACGGAGATCTTCACACTGGTGTCTTCACTGAGACTTGAACTTTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS TCA 72 bp | ACTCGTCCACACTCGTTGCACTTGAAAGGCTTGCCGTaGACTGTTAGATGTTCAATGAGCTCGGAGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TRPHSLHLKGLP*TVRCSMSSEFW Trigger: CCAGAACTCCGAGCTCATTGAACATCTAACAGTTCACGGCAAGCCTTTCAAGTGCAACGAGTGTGGACGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CAA 72 bp | CAGGCACAGAGAGATCTCCACAAGATTCCACCTGAGTaGAATCATGAATCCCAGAAAGTTCAAGTCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QAQRDLHKIPPE*NHESQKVQVSV Trigger: CACTGAGACTTGAACTTTCTGGGATTCATGATTCAACTCAGGTGGAATCTTGTGGAGATCTCTCTGTGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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| CDS CAA 90 bp | ATCTTAGTGCAGGCACAGAGAGATCTCCACAAGATTCCACCTGAGTaGAATCATGAATCCCAGAAAGTTCAAGTCTCAGTGAAGACACCA | + |
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Preference number: 6 (lower is better) Translates to: ILVQAQRDLHKIPPE*NHESQKVQVSVKTP Trigger: TGGTGTCTTCACTGAGACTTGAACTTTCTGGGATTCATGATTCAACTCAGGTGGAATCTTGTGGAGATCTCTCTGTGCCTGCACTAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056246.8 |
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