Pregenerated sensors for ZFP953 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098905Ensembl transcript IDs: ENSMUST00000081582.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCAAGAAACTTCCAAAATTATAGAAACAACAGAGACCACTAGCTaGCTGGACAGTTACCCACATTCCTCTGCAACACTTGGGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: EQETSKIIETTETTS*LDSYPHSSATLGHP Trigger: TGGATGCCCAAGTGTTGCAGAGGAATGTGGGTAACTGTCCAGGCAGCTAGTGGTCTCTGTTGTTTCTATAATTTTGGAAGTTTCTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 90 bp | GACACTGGGTCTGAACCTTTGAAACCTCAAATATATGTCCCCCAGTaGCACTCTTACACCAATGATGCCACACTTCTTAATCCTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: DTGSEPLKPQIYVPQ*HSYTNDATLLNPFP Trigger: TGGAAAAGGATTAAGAAGTGTGGCATCATTGGTGTAAGAGTGTCACTGGGGGACATATATTTGAGGTTTCAAAGGTTCAGACCCAGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR GCA 90 bp | TATATTATTTCTGGGCACAGAAATTTATGTTTGTGTGGGGGTCCATaGAAGAAGGTCAGAGGACAAGCTTTAGAGGTAATTACCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: YIISGHRNLCLCGGP*KKVRGQALEVITSF Trigger: GAAAGAGGTAATTACCTCTAAAGCTTGTCCTCTGACCTTCTTGCATGGACCCCCACACAAACATAAATTTCTGTGCCCAGAAATAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CCA 90 bp | GATCTAGGTTTATATTATTTCTGGGCACAGAAATTTATGTTTGTGTaGGGGTCCATGCAAGAAGGTCAGAGGACAAGCTTTAGAGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: DLGLYYFWAQKFMFV*GSMQEGQRTSFRGN Trigger: ATTACCTCTAAAGCTTGTCCTCTGACCTTCTTGCATGGACCCCCACACAAACATAAATTTCTGTGCCCAGAAATAATATAAACCTAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR TCA 90 bp | GATTGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAAAGACGTTTAGTCGCCACTGATAATTaGAGACCTTGCCACATACTT | + |
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Preference number: 2 (lower is better) Translates to: DWGCCQKLMCLAVTKRRLVATDN*RPCHIL Trigger: AAGTATGTGGCAAGGTCTTCAATTATCAGTGGCGAC...TAAACGTCTTTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAAAGACGTTTAGGTTTCTCACCTGTGTaGATTCTCTTTTCAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: DWGCCQKLMCLAVTKRRLGFSPV*ILFSES Trigger: ACTTTCTGAAAAGAGAATCCACACAGGTGAGAAACC...TAAACGTCTTTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACCGATCGCTCTCCTTTTaGCATGGTAGTATGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: MQGMSHKNNNTKVQASVDRSLSF*HGSMDD Trigger: ATCATCCATACTACCATGCCAAAAGGAGAGCGATCG...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCACTGGGAATGCTAACATaGGTGTGGGTCTTCTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQALGMLT*VWVFLA Trigger: TGCCAAGAAGACCCACACCCATGTTAGCATTCCCAG...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAAAGACGTTTAAACTTTCATCATACATaGAAAAATCCACCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: DWGCCQKLMCLAVTKRRLNFHHT*KNPPCL Trigger: AAGGCAGGGTGGATTTTTCCATGTATGATGAAAGTT...TAAACGTCTTTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR GCA 90 bp | CTATGTGAGGATACTGGGAATGCTAACATGGGTGTGGGTCTTCTTGGCATTCAGCACGATCCTCACTTTTaGATATTTTCTTTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LCEDTGNANMGVGLLGIQHDPHF*IFSFQN Trigger: ATTCTGGAAAGAAAATATGCAAAAGTGAGGATCGTG...CTGAATGCCAAGAAGACCCACACCCATGTTAGCATTCCCAGTATCCTCACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR GCA 90 bp | GATTGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAAAGACGTTTAGAATCTTGCCATTTTTaGTTTGTTTCCTCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: DWGCCQKLMCLAVTKRRLESCHF*FVSSQT Trigger: TGTTTGAGAGGAAACAAAGCAAAAATGGCAAGATTC...TAAACGTCTTTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATGGAAAAATCCACCCTaGCTTTTGGGAATGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQAWKNPP*LLGMRL Trigger: CAGTCTCATTCCCAAAAGGCAGGGTGGATTTTTCCA...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACCACAACACATGGTGAGAAAGTTAAAACATCAGGAACATAAGCAGCTGTTGATGGATAATGGATaGCATTGCCACCTACTTCAC | + |
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Preference number: 2 (lower is better) Translates to: FQPQHMVRKLKHQEHKQLLMDNG*HCHLLH Trigger: GTGAAGTAGGTGGCAATGCCATCCATTATCCATCAA...CAGCTGCTTATGTTCCTGATGTTTTAACTTTCTCACCATGTGTTGTGGTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACTTCAGAAAGTACTTATaGACAATAGAAGGTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: MQGMSHKNNNTKVQASVDFRKYL*TIEGQA Trigger: GGCCTGACCTTCTATTGTCCATAAGTACTTTCTGAA...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATGTCCACACTTTGGATaGCATACTTTGTGCAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQACPHFG*HTLCSL Trigger: TAGACTGCACAAAGTATGTCATCCAAAGTGTGGACA...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCAAGGAACATAAGCAGCTaGTCATGTTTCTTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQARNISS*SCFFHS Trigger: ACTGTGGAAGAAACATGACCAGCTGCTTATGTTCCT...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACTATTTGTCCACACTTTaGATGACATACTTTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: MQGMSHKNNNTKVQASVDYLSTL*MTYFVQ Trigger: CTGCACAAAGTATGTCATCCAAAGTGTGGACAAATA...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCAAGTCCATGTGTCACATaGGATTCAAGGCAATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQASPCVT*DSRQSF Trigger: AAAAGATTGCCTTGAATCTCATGTGACACATGGACT...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATTCAAATCTATTCTATaGGCCCTTGGGGCAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQAFKSIL*ALGAIL Trigger: AAGAATTGCCCCAAGGGCTCATAGAATAGATTTGAA...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACGACTTCTCTCTTGCATaGATTGTTATGTTTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: MQGMSHKNNNTKVQASVDDFSLA*IVMFVK Trigger: CTTTACAAACATAACAATCCATGCAAGAGAGAAGTC...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCAGATAATCAAAGGCTTTaGCACACATTTCACAACTGT | + |
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Preference number: 2 (lower is better) Translates to: KTLMQGMSHKNNNTKVQADNQRL*HTFHNC Trigger: ACAGTTGTGAAATGTGTGGCAAAGCCTTTGATTATC...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCAACCACAACACATGGTGAGAAAGTTAAAACATCAGGAACATAAGCAGCTGAACCAACAAGAGGCTTaGAATTCAAATGATTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: FQPQHMVRKLKHQEHKQLNQQEA*NSNDSR Trigger: TCTAGAATCATTTGAATTGCAAGCCTCTTGTTGGTT...CAGCTGCTTATGTTCCTGATGTTTTAACTTTCTCACCATGTGTTGTGGTTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACCACAACACATGGTGAGAAAGTTAAAACATCAGGAACATAAGCAGCTGGTTCAGACCATGCAATaGAATTCAAAAATATTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FQPQHMVRKLKHQEHKQLVQTMQ*NSKIFA Trigger: GGCAAATATTTTTGAATTCCATTGCATGGTCTGAAC...CAGCTGCTTATGTTCCTGATGTTTTAACTTTCTCACCATGTGTTGTGGTTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR GCA 72 bp | TTGGTGCCCATCATCTTCTTGGAAGTAGATTGGGGGTaGTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVPIIFLEVDWG*CQKLMCLAVTK Trigger: TTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATCTACTTCCAAGAAGATGATGGGCACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACTGGGTGTGGGTCTTCTaGGCATTCAGTATGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: MQGMSHKNNNTKVQASVDWVWVF*AFSMFP Trigger: TGGGAACATACTGAATGCCAAGAAGACCCACACCCA...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | GATTGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGTCACGAAAAGACGTTTACTGGTAATACAGTGTTaGCCACATTTTTCACATGCA | + |
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Preference number: 3 (lower is better) Translates to: DWGCCQKLMCLAVTKRRLLVIQC*PHFSHA Trigger: TGCATGTGAAAAATGTGGCAAACACTGTATTACCAG...TAAACGTCTTTTCGTGACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGATCAGCCCCAAATTGAGAATGACAACCACACAGCCCGATCGCTCTCCTTTAAGAATTCTTTGATGTaGCTTAAGACCCAAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: KDQPQIENDNHTARSLSFKNSLM*LKTQRL Trigger: CAGTCTTTGGGTCTTAAGCAACATCAAAGAATTCTT...AAAGGAGAGCGATCGGGCTGTGTGGTTGTCATTCTCAATTTGGGGCTGATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | TCAACTTCCCGGTGTCCTATTTGTCCACACTTTGGATaGCATACTTTGTGCAGTCTAGGCAAAGGTAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: STSRCPICPHFG*HTLCSLGKGRF Trigger: AAACCTACCTTTGCCTAGACTGCACAAAGTATGTCATCCAAAGTGTGGACAAATAGGACACCGGGAAGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR GCA 72 bp | TCTGGGCACAGAAATTTATGTTTGTGTGGGGGTCCATaGAAGAAGGTCAGAGGACAAGCTTTAGAGGTAATT | + |
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Preference number: 3 (lower is better) Translates to: SGHRNLCLCGGP*KKVRGQALEVI Trigger: AATTACCTCTAAAGCTTGTCCTCTGACCTTCTTGCATGGACCCCCACACAAACATAAATTTCTGTGCCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CCA 72 bp | TTCTATGTGAGGATACTGGGAATGCTAACATGGGTGTaGGTCTTCTTGGCATTCAGTATGTTCCCAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: FYVRILGMLTWV*VFLAFSMFPKS Trigger: TGACTTTGGGAACATACTGAATGCCAAGAAGACCCACACCCATGTTAGCATTCCCAGTATCCTCACATAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR GCA 72 bp | ACTTCCAAAATTATAGAAACAACAGAGACCACTAGCTaGCTGGACAGTTACCCACATTCCTCTGCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: TSKIIETTETTS*LDSYPHSSATL Trigger: AAGTGTTGCAGAGGAATGTGGGTAACTGTCCAGGCAGCTAGTGGTCTCTGTTGTTTCTATAATTTTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACCTTGCCATTTTTGCTTaGTTTCCTCTCAAACACCAT | + |
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Preference number: 3 (lower is better) Translates to: MQGMSHKNNNTKVQASVDLAIFA*FPLKHH Trigger: ATGGTGTTTGAGAGGAAACAAAGCAAAAATGGCAAG...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | GGACTTCGATTCAGCATGAAGCTGTTGATAAATTTTGAGGGTCTGGAGAAGTATCCACGATCCTCACTTTaGCATATTTTCTTTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GLRFSMKLLINFEGLEKYPRSSL*HIFFPE Trigger: TTCTGGAAAGAAAATATGCAAAAGTGAGGATCGTGG...ATACTTCTCCAGACCCTCAAAATTTATCAACAGCTTCATGCTGAATCGAAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | TACAACACTATAAAAGACCACAGTCCATGTGTCACATaGGATTCAAGGCAATCTTTTGACTGTGAGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: YNTIKDHSPCVT*DSRQSFDCELL Trigger: TAGGAGCTCACAGTCAAAAGATTGCCTTGAATCTCATGTGACACATGGACTGTGGTCTTTTATAGTGTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | TCTGAACCTTTGAAACCTCAAATATATGTCCCCCAGTaGCACTCTTACACCAATGATGCCACACTTCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: SEPLKPQIYVPQ*HSYTNDATLLN Trigger: ATTAAGAAGTGTGGCATCATTGGTGTAAGAGTGTCACTGGGGGACATATATTTGAGGTTTCAAAGGTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | CATCCTCATCAGAGACCTGACAAGGATAAAATTACCTaGGAAAACAGGAAATGCAGAGCAAGAAACTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: HPHQRPDKDKIT*ENRKCRARNFQ Trigger: TTGGAAGTTTCTTGCTCTGCATTTCCTGTTTTCTCAGGTAATTTTATCCTTGTCAGGTCTCTGATGAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CCA 72 bp | CTCACCTGTGTGGATTCTCTTTTCAGAAAGTACTTATaGACAATAGAAGGTCAGGCCACGTACTTCATATTT | + |
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Preference number: 3 (lower is better) Translates to: LTCVDSLFRKYL*TIEGQATYFIF Trigger: AAATATGAAGTACGTGGCCTGACCTTCTATTGTCCATAAGTACTTTCTGAAAAGAGAATCCACACAGGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR-3UTR CAA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCACTATTTGTCCACACTTaGGATGACATACTTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: KTLMQGMSHKNNNTKVQALFVHT*DDILCA Trigger: TGCACAAAGTATGTCATCCAAAGTGTGGACAAATAG...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | AGGACTTCGATTCAGCATGAAGCTGTTGATAAATTTTaGGGGTCTGGAGAAGTATTAAGATGTTATGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: RTSIQHEAVDKF*GSGEVLRCYEH Trigger: ATGCTCATAACATCTTAATACTTCTCCAGACCCTCAAAATTTATCAACAGCTTCATGCTGAATCGAAGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | GTATTATCTGATACTGCAGCATCTCAGTCAAACAGATaGTTAAAACTGCAATCAACAGACCTCCTGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: VLSDTAASQSNR*LKLQSTDLLKS Trigger: TGATTTCAGGAGGTCTGTTGATTGCAGTTTTAATCATCTGTTTGACTGAGATGCTGCAGTATCAGATAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR TCA 72 bp | AGGAGATGGATAAATAGTTGGTCTCAGGGTATTATCTaGTACTGCAGCATCTCAGTCAAACAGATGATTAAA | + |
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Preference number: 3 (lower is better) Translates to: RRWINSWSQGII*YCSISVKQMIK Trigger: TTTAATCATCTGTTTGACTGAGATGCTGCAGTATCAGATAATACCCTGAGACCAACTATTTATCCATCTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CCA 72 bp | TCATTTCAAAAGTGTGATCTAGGTTTATATTATTTCTaGGCACAGAAATTTATGTTTGTGTGGGGGTCCATG | + |
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Preference number: 3 (lower is better) Translates to: SFQKCDLGLYYF*AQKFMFVWGSM Trigger: CATGGACCCCCACACAAACATAAATTTCTGTGCCCAGAAATAATATAAACCTAGATCACACTTTTGAAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR GCA 72 bp | TTAATCAAGAGAAATTCAACAAACCAACAAGAGGCTTaGAATTCAAATGATTCTAGAACTCATGCTGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LIKRNSTNQQEA*NSNDSRTHAAN Trigger: GTTAGCAGCATGAGTTCTAGAATCATTTGAATTGCAAGCCTCTTGTTGGTTTGTTGAATTTCTCTTGATTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CAA 72 bp | ACTACAGTGGGAGGTTCTTTGGTGCCCATCATCTTCTaGGAAGTAGATTGGGGGTGCTGTCAGAAGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TTVGGSLVPIIF*EVDWGCCQKLM Trigger: CATCAGCTTCTGACAGCACCCCCAATCTACTTCCAAGAAGATGATGGGCACCAAAGAACCTCCCACTGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| 3UTR CAA 72 bp | AGGTTCTTTGGTGCCCATCATCTTCTTGGAAGTAGATaGGGGGTGCTGTCAGAAGCTGATGTGTCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RFFGAHHLLGSR*GVLSEADVSCC Trigger: ACAGCAAGACACATCAGCTTCTGACAGCACCCCCAATCTACTTCCAAGAAGATGATGGGCACCAAAGAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR GCA 90 bp | GGACTTCGATTCAGCATGAAGCTGTTGATAAATTTTGAGGGTCTGGAGAAGTATGAAAGCGGAAGGCCTTaGCACATTTATCACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: GLRFSMKLLINFEGLEKYESGRP*HIYHTC Trigger: GCAAGTGTGATAAATGTGGCAAGGCCTTCCGCTTTC...ATACTTCTCCAGACCCTCAAAATTTATCAACAGCTTCATGCTGAATCGAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR GCA 90 bp | ATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCATCAGTCGACTCCCCACAAAGATGTTaGCACATTCTTTGCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: MQGMSHKNNNTKVQASVDSPQRC*HILCTY Trigger: ATACGTGCAAAGAATGTGGCAACATCTTTGTGGGGA...GTCGACTGATGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR CCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCAAGTGATGGTGAAGAGTaGAAGGCCTTTCCACAGACT | + |
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Preference number: 4 (lower is better) Translates to: KTLMQGMSHKNNNTKVQASDGEE*KAFPQT Trigger: AGTCTGTGGAAAGGCCTTCCACTCTTCACCATCACT...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR TCA 90 bp | AAAACACTGATGCAAGGAATGAGCCATAAAAATAACAACACCAAAGTCCAGGCAATGTTGAAAAAGTTTTaGTGGAACATGGAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KTLMQGMSHKNNNTKVQAMLKKF*WNMEGP Trigger: AGGGCCTTCCATGTTCCATCAAAACTTTTTCAACAT...TGCCTGGACTTTGGTGTTGTTATTTTTATGGCTCATTCCTTGCATCAGTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCAGCCCCAAATTGAGAATGACAACCACACAGCCCGATCGCTCTCCTTTGGATATTCGAAGGCCTaGCCACATACATCACACTTA | + |
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Preference number: 5 (lower is better) Translates to: KDQPQIENDNHTARSLSFGYSKA*PHTSHL Trigger: TAAGTGTGATGTATGTGGCAAGGCCTTCGAATATCC...AAAGGAGAGCGATCGGGCTGTGTGGTTGTCATTCTCAATTTGGGGCTGATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCAGCCCCAAATTGAGAATGACAACCACACAGCCCGATCGCTCTCCTTTTATGTTGAAAAAGTTTaGATGGAACATGGAAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KDQPQIENDNHTARSLSFYVEKV*MEHGRP Trigger: GGGCCTTCCATGTTCCATCAAAACTTTTTCAACATA...AAAGGAGAGCGATCGGGCTGTGTGGTTGTCATTCTCAATTTGGGGCTGATCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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| CDS-3UTR CAA 90 bp | TTCCAACCACAACACATGGTGAGAAAGTTAAAACATCAGGAACATAAGCAGCTGTTCCCCACAAAGATGTaGCCACATTCTTTGCACGTA | + |
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Preference number: 5 (lower is better) Translates to: FQPQHMVRKLKHQEHKQLFPTKM*PHSLHV Trigger: TACGTGCAAAGAATGTGGCAACATCTTTGTGGGGAA...CAGCTGCTTATGTTCCTGATGTTTTAACTTTCTCACCATGTGTTGTGGTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081582.8 |
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