Pregenerated sensors for ZFP952 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053390Ensembl transcript IDs: ENSMUST00000087666.11, ENSMUST00000141815.3, ENSMUST00000157017.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCTGAGCCATCTGACTGACCCTGCATACACTTTTCCTGACAGTTaGTCAAAGATCTATATGGGCTTCAGTTCTACCCACTGGGTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SLSHLTDPAYTFPDS*SKIYMGFSSTHWVS Trigger: AGAAACCCAGTGGGTAGAACTGAAGCCCATATAGATCTTTGATCAACTGTCAGGAAAAGTGTATGCAGGGTCAGTCAGATGGCTCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR CCA 90 bp | ACAAGTCAGAGGCAAACCTTGGAAATTCAGTTCTCTCTCTTCACATaGGTTCTGAGGTTCCAACTATGGCTACCAAGCTTAGGGCAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: TSQRQTLEIQFSLFT*VLRFQLWLPSLGQV Trigger: CACTTGCCCTAAGCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR CCA 90 bp | TTCTTTCCCAATTTGTCTTTAATTACACCTATGAGACTAGAAAGATaGCTCAGAATATACTGCTCTCCGGAGGACCCAAGCTGGATTTCC | + |
|
Preference number: 1 (lower is better) Translates to: FFPNLSLITPMRLER*LRIYCSPEDPSWIS Trigger: GGAAATCCAGCTTGGGTCCTCCGGAGAGCAGTATATTCTGAGCCATCTTTCTAGTCTCATAGGTGTAATTAAAGACAAATTGGGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTTTAAGGCCAGCCTGGGGGTATGCATGCAAATaGCAGCACATATGTACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LNTRKAEAGGPLSLRPAWGYACK*QHICTS Trigger: ACTTGTACATATGTGCTGTCATTTGCATGCATACCC...CCAGGCTGGCCTTAAACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCAGCTCCTGGGGAATGTGATGCCTCTGACTGCTGTGTGCTCCAGCCCTCAAGTTTATCTCCAGTGTaGATTTGCTCACAATACCGG | + |
|
Preference number: 2 (lower is better) Translates to: TPAPGECDASDCCVLQPSSLSPV*ICSQYR Trigger: CCGGTATTGTGAGCAAATTCACACTGGAGATAAACT...TGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACATTCCCCAGGAGCTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAAGCTTAGGGCAAGTGCTGGACAACCAAGGGGCTaGACAGTGAAACCCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LHMGSEVPTMATKLRASAGQPRG*TVKPCL Trigger: GAGACAGGGTTTCACTGTGCAGCCCCTTGGTTGTCC...AGCACTTGCCCTAAGCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAAGCTTAGGGCAAGTGCTCCTGAGCCATCTGACTaGCCCTGCATACACTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LHMGSEVPTMATKLRASAPEPSD*PCIHFS Trigger: GGAAAAGTGTATGCAGGGTCAGTCAGATGGCTCAGG...AGCACTTGCCCTAAGCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTGGACTTTGCTTTGTCTaGAAGGACTCAGAAGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSGLCFV*KDSEEV Trigger: TACTTCTTCTGAGTCCTTTCAGACAAAGCAAAGTCC...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAGGACAACCAAGGGGCTaGACAGTGAAACCCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CNFLASPSPMSKWHEAGTGQPRG*TVKPCL Trigger: GAGACAGGGTTTCACTGTGCAGCCCCTTGGTTGTCC...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTGTCAGAGGCAAACCTTaGAAATTCAGTTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSVRGKP*KFSSLS Trigger: AGAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGAC...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTAAGGCTTTCTCAACTTaGTTCCATTCACGGAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSKAFST*FHSRSL Trigger: TAAACTCCGTGAATGGAAGCAAGTTGAGAAAGCCTT...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCAAGGCCAGCCTGGTCTaGAGAGTGAGTTGCAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SQVCANPLYSILQFSSISKASLV*RVSCRT Trigger: TGTCCTGCAACTCACTCTGCAGACCAGGCTGGCCTT...GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCTGTGATGCCTCTGACTaGTGTGTGCTCCAGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SQVCANPLYSILQFSSISCDASD*CVLQPS Trigger: TGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACA...GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTGGCATGTGGACACCATaGACACACACCTATGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: FLLRAYREKRTDQTSESCGMWTP*THTYVM Trigger: CATTACATAGGTGTGTGTGCATGGTGTCCACATGCC...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGATTTCCAGCCGTCACATaGGACACCTCACCGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VFLLLQHTGENSLSPYLRFPAVT*DTSPAP Trigger: AGGAGCCGGTGAGGTGTCCCATGTGACGGCTGGAAA...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCTTCTCTCATGGTTGTTaGGATGACTGGCACGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SQVCANPLYSILQFSSISFSHGC*DDWHGG Trigger: TCCTCCGTGCCAGTCATCTCAACAACCATGAGAGAA...GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTCCAATTCCAATCTATGTGAGGGTATaGATGCAAATGACAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: RAYREKRTDQTSESCPIPIYVRV*MQMTAH Trigger: ATGTGCTGTCATTTGCATGCATACCCTCACATAGAT...TGGAATTGGACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCTGCTCCAGCCCTCACATaGACATACCCACACATAACT | + |
|
Preference number: 2 (lower is better) Translates to: PRCVQIHCIQFCNFLASPAPALT*TYPHIT Trigger: AGTTATGTGTGGGTATGTGCATGTGAGGGCTGGAGC...AGGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | CAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAACATACAACTTACTGGCTCAGAATATACTaGTCTCCGGAGGACCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QHTGENSLSPYLRQHTTYWLRIY*SPEDPS Trigger: GCTTGGGTCCTCCGGAGAGCAGTATATTCTGAGCCA...GTAAGTTGTATGTTGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCTCTGTCCAATTCCACATaGACACTGGCATGTGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: PRCVQIHCIQFCNFLASPLSNST*TLACGH Trigger: GTGTCCACATGCCAGTGTGCATGTGGAATTGGACAG...AGGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTATTCTTTCATGGTTCTaGAGGGATGAGGAATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLLRAYREKRTDQTSESCILSWF*RDEEYL Trigger: CAGATATTCCTCATCCCTTCAGAACCATGAAAGAAT...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTCAGAAGCATCGCGCTGGATaGAGGCTTTCCCACAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: TNSTKSDFQREAFIWSAQKHRAG*RLSHNA Trigger: AGCATTGTGGGAAAGCCTTCATCCAGCGCGATGCTT...CTGAGCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGATGGCTCAGAATATACTaGTCTCCGGAGGACCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFLLLQHTGENSLSPYLRWLRIY*SPEDPS Trigger: GCTTGGGTCCTCCGGAGAGCAGTATATTCTGAGCCA...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAAATTCAGTTCTCTCTCTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAGTGCTCAGTTTTCTTaGTTTTACAACACACAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GNSVLSLHMGSEVPTMATSAQFS*FYNTQE Trigger: CTCCTGTGTGTTGTAAAAGCAAGAAAACTGAGCACT...GGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAACTGAATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAGTCAGAGGCAAACCTTaGAAATTCAGTTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CNFLASPSPMSKWHEAGTVRGKP*KFSSLS Trigger: AGAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGAC...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACACTGCTTACACACAAATaGTTCCTCTCCAATGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CNFLASPSPMSKWHEAGTLLTHK*FLSNGD Trigger: ATCACCATTGGAGAGGAACCATTTGTGTGTAAGCAG...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR CAA 90 bp | CCGGTCAGAATTAAGACTCCTATAGGCTTCATTAGATTGCTTATTTaGATAGGGTGTCTCTCGAGGAGGACTTTGCTTTGTCTGAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PVRIKTPIGFIRLLI*IGCLSRRTLLCLKG Trigger: TCCTTTCAGACAAAGCAAAGTCCTCCTCGAGAGACACCCTATCAAAATAAGCAATCTAATGAAGCCTATAGGAGTCTTAATTCTGACCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTTGCATACACTTTTCCTaGCAGTTGATCAAAGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: FLLRAYREKRTDQTSESCCIHFS*QLIKDL Trigger: TAGATCTTTGATCAACTGTCAGGAAAAGTGTATGCA...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCCAAGGGGCTGCACAGTaGAACCCTGTCTCAAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECQGAAQ*NPVSKQ Trigger: TTGTTTTGAGACAGGGTTTCACTGTGCAGCCCCTTG...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAGTTCCTCTCCAATGGTaGTTCTCTCATATATTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CNFLASPSPMSKWHEAGTVPLQW*FSHIFD Trigger: GTCAAATATATGAGAGAATCACCATTGGAGAGGAAC...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCGCTCCAGCCCTCACATaGACATACCCACACATAACT | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECAPALT*TYPHIT Trigger: AGTTATGTGTGGGTATGTGCATGTGAGGGCTGGAGC...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACACTGTCCAATTCCACATaGACACTGGCATGTGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: FLAFTTHRREFPFTLFETLSNST*TLACGH Trigger: GTGTCCACATGCCAGTGTGCATGTGGAATTGGACAG...TGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTATGAGACTAGAAAGATaGCTCAGAATATACTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FLLRAYREKRTDQTSESCMRLER*LRIYCS Trigger: AGAGCAGTATATTCTGAGCCATCTTTCTAGTCTCAT...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCCATCTCCTTCTCCAATaGGTAAATGGCATGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECHLLLQ*VNGMRQ Trigger: CTGCCTCATGCCATTTACTCATTGGAGAAGGAGATG...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTCTCCAATGAGTAAATaGCATGAGGCAGGGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECSPMSK*HEAGTA Trigger: TGCTGTCCCTGCCTCATGCCATTTACTCATTGGAGA...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCACTTTTCCTGACAGTTaGTCAAAGATCTATATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SQVCANPLYSILQFSSISTFPDS*SKIYMG Trigger: GCCCATATAGATCTTTGATCAACTGTCAGGAAAAGT...GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | CAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAACATACAACTTACAAGGCTTCACCATACTaGTTACACACAAATGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QHTGENSLSPYLRQHTTYKASPY*LHTNGS Trigger: GGAACCATTTGTGTGTAAGCAGTATGGTGAAGCCTT...GTAAGTTGTATGTTGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAGGGTATGCATGCAAATaGCAGCACATATGTACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FLAFTTHRREFPFTLFETGYACK*QHICTS Trigger: ACTTGTACATATGTGCTGTCATTTGCATGCATACCC...TGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGAATGGTTCTGAAGGGATaGGGAATATCTGAATGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VFLLLQHTGENSLSPYLRMVLKG*GISECL Trigger: AAGGCATTCAGATATTCCTCATCCCTTCAGAACCAT...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR GCA 90 bp | GCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTCATCTATGTGAGGGTATaGATGCAAATGACAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: AQIPQNQTFKGKHLFGVLIYVRV*MQMTAH Trigger: ATGTGCTGTCATTTGCATGCATACCCTCACATAGAT...GAGCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTTCTCTCTCTTCACATaGGTTCTGAGGTTCCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECFSLFT*VLRFQL Trigger: TAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAA...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTTCAGTTCTACCCACTaGGTTTCTTTTCAGCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: MHKFHKIRLSKGSIYLECFSSTH*VSFQHE Trigger: CTCATGCTGAAAAGAAACCCAGTGGGTAGAACTGAA...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAACTTTTCCTGACAGTTaGTCAAAGATCTATATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FLAFTTHRREFPFTLFETTFPDS*SKIYMG Trigger: GCCCATATAGATCTTTGATCAACTGTCAGGAAAAGT...TGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR TCA 90 bp | CAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAACATACAACTTACTGCATACACTTTTCCTaGCAGTTGATCAAAGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: QHTGENSLSPYLRQHTTYCIHFS*QLIKDL Trigger: TAGATCTTTGATCAACTGTCAGGAAAAGTGTATGCA...GTAAGTTGTATGTTGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGAAGGGAAGCATTTATTTaGAGTGCTCAGTTTTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: VFLLLQHTGENSLSPYLRREAFI*SAQFSC Trigger: GCAAGAAAACTGAGCACTCCAAATAAATGCTTCCCT...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR CCA 72 bp | CTCCGGAGGACCCAAGCTGGATTTCCAGCCGTCACATaGGACACCTCACCGGCTCCTGTAACTCCAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRRTQAGFPAVT*DTSPAPVTPAP Trigger: AGGAGCTGGAGTTACAGGAGCCGGTGAGGTGTCCCATGTGACGGCTGGAAATCCAGCTTGGGTCCTCCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR GCA 72 bp | GTAACTCCAGCTCCTGGGGAATGTGATGCCTCTGACTaGTGTGTGCTCCAGCCCTCACATGCACATACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VTPAPGECDASD*CVLQPSHAHTH Trigger: GTGGGTATGTGCATGTGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACATTCCCCAGGAGCTGGAGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR GCA 72 bp | TCTGAGTTTAAGGCCAGCCTGGTCTGCAGAGTGAGTTaGAGGACAACCAAGGGGCTGCACAGTGAAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEFKASLVCRVS*RTTKGLHSETL Trigger: CAGGGTTTCACTGTGCAGCCCCTTGGTTGTCCTGCAACTCACTCTGCAGACCAGGCTGGCCTTAAACTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR GCA 72 bp | CAGCTCCTGGGGAATGTGATGCCTCTGACTGCTGTGTaGTCCAGCCCTCACATGCACATACCCACACATAAC | + |
|
Preference number: 3 (lower is better) Translates to: QLLGNVMPLTAV*SSPHMHIPTHN Trigger: GTTATGTGTGGGTATGTGCATGTGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACATTCCCCAGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGGGGAATGTGATGCCTCTGACTGCTGTGTGCTCCAGCCCTCACATGCACAGTCAGAGGCAAACCTaGGAAATTCAGTTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLGNVMPLTAVCSSPHMHSQRQT*EIQFSL Trigger: GAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGACT...GTGCATGTGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACATTCCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTCCAATTCCAGGTCTGCAGAGTGAGTaGCAGGACAACCAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAYREKRTDQTSESCPIPGLQSE*QDNQGA Trigger: AGCCCCTTGGTTGTCCTGCAACTCACTCTGCAGACC...TGGAATTGGACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTCTCTCGAGGAGGACTTaGCTTTGTCTGAAAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSLSRRT*LCLKGL Trigger: GAGTCCTTTCAGACAAAGCAAAGTCCTCCTCGAGAG...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAGGTCTGCAGAGTGAGTaGCAGGACAACCAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CNFLASPSPMSKWHEAGTGLQSE*QDNQGA Trigger: AGCCCCTTGGTTGTCCTGCAACTCACTCTGCAGACC...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGTTCTCTCTCTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAAGCGAGGAGGACTTTGCTTaGTCTGAAAGGACTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQFSLFTWVLRFQLWLPSEEDFA*SERTQK Trigger: CTTCTGAGTCCTTTCAGACAAAGCAAAGTCCTCCTC...GCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAACTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR CCA 72 bp | TTCTCTCTCTTCACATGGGTTCTGAGGTTCCAACTATaGCTACCAAGCTTAGGGCAAGTGCTTTTATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLFTWVLRFQL*LPSLGQVLLSL Trigger: CAGGGATAAAAGCACTTGCCCTAAGCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAGAGTGCTCAGTTTTCTaGCTTTTACAACACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CNFLASPSPMSKWHEAGTECSVF*LLQHTG Trigger: TCCTGTGTGTTGTAAAAGCAAGAAAACTGAGCACTC...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTATTAGATTGCTTATTTaGATAGGGTGTCTCTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLLRAYREKRTDQTSESCIRLLI*IGCLSR Trigger: CCTCGAGAGACACCCTATCAAAATAAGCAATCTAAT...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAAAGGGAAGCATTTATTaGGAGTGCTCAGTTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CNFLASPSPMSKWHEAGTKGSIY*ECSVFL Trigger: CAAGAAAACTGAGCACTCCAAATAAATGCTTCCCTT...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGGAAGCATTTATTTGGAGTGCTCAGTTTTCTTGCTTTTACAACACACAGAGTCAGAGGCAAACCTaGGAAATTCAGTTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QREAFIWSAQFSCFYNTQSQRQT*EIQFSL Trigger: GAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGACT...CTGTGTGTTGTAAAAGCAAGAAAACTGAGCACTCCAAATAAATGCTTCCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR GCA 72 bp | CCTCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTaGAATTTTCTAGCATCTCCTTCTCCAATGAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPRCVQIHCIQF*NFLASPSPMSK Trigger: TTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACCACTGTATTCAATTTaGCAATTTTCTAGCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFLLLQHTGENSLSPYLRPLYSI*QFSSIS Trigger: GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGG...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCGCCTGTTTCAAAAGCAGCCTGAGTTCCTTCTTAGGGCCTACAGAGAGCCCACAGGGTTTCTCTaGAGTTTCACATCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRRLFQKQPEFLLRAYREPTGFL*SFTSEV Trigger: CACCTCAGATGTGAAACTGCAGAGAAACCCTGTGGG...CTCTCTGTAGGCCCTAAGAAGGAACTCAGGCTGCTTTTGAAACAGGCGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAAGTGCTTTTATCCCTGAGCCATCTGACTGACCCTGCATACACTTTTCCTCCCACAGGGTTTCTCTaGAGTTTCACATCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQVLLSLSHLTDPAYTFPPTGFL*SFTSEV Trigger: CACCTCAGATGTGAAACTGCAGAGAAACCCTGTGGG...AGGAAAAGTGTATGCAGGGTCAGTCAGATGGCTCAGGGATAAAAGCACTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTGGTCATAGGAACGAATaGAGGTTTTTCCACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSGHRNE*RFFHIA Trigger: AGCAATGTGGAAAAACCTTCATTCGTTCCTATGACC...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTCCAATTCCATTCTCTCATGGTTGTTaGGATGACTGGCACGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAYREKRTDQTSESCPIPFSHGC*DDWHGG Trigger: TCCTCCGTGCCAGTCATCTCAACAACCATGAGAGAA...TGGAATTGGACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | CTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAAGCTTAGGGCAAGTGCTACTTCTGAGAGGGAATaGACAAGGATGTCTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHMGSEVPTMATKLRASATSERE*TRMSLA Trigger: TGCTAGAGACATCCTTGTTCATTCCCTCTCAGAAGT...AGCACTTGCCCTAAGCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GTGCACACTTTTAATCTCAACACTCGGAAGGCAGAGGCAGGGGGACCTCTGAGTGTTCCTCTCCAATGGTaGTTCTCTCATATATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTFNLNTRKAEAGGPLSVPLQW*FSHIFD Trigger: GTCAAATATATGAGAGAATCACCATTGGAGAGGAAC...ACTCAGAGGTCCCCCTGCCTCTGCCTTCCGAGTGTTGAGATTAAAAGTGTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTGCTCGTTCATGTTTGTaGAGGCATGTGGAGACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRAYREKRTDQTSESCARSCL*RHVETL Trigger: TAGGGTCTCCACATGCCTTCACAAACATGAACGAGC...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTTTTCTCCACACTGACTaGCATCTCCGTAGTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLRAYREKRTDQTSESCFLHTD*HLRSHN Trigger: GTTGTGACTACGGAGATGTCAGTCAGTGTGGAGAAA...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR CCA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACAAGAGCTTCTTTTGACTaGAATCCAGCAGAGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CNFLASPSPMSKWHEAGTRASFD*NPAEPT Trigger: AGTGGGCTCTGCTGGATTCCAGTCAAAAGAAGCTCT...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GGAAATTCAGTTCTCTCTCTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCATGGTTCTGAAGGGATaGGGAATATCTGAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNSVLSLHMGSEVPTMATMVLKG*GISECL Trigger: AAGGCATTCAGATATTCCTCATCCCTTCAGAACCAT...GGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAACTGAATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGTGTGTGCAAATCCACTGTATTCAATTTTGCAATTTTCTAGCATCTCCTTTCTCCACACTGACTaGCATCTCCGTAGTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQVCANPLYSILQFSSISFLHTD*HLRSHN Trigger: GTTGTGACTACGGAGATGTCAGTCAGTGTGGAGAAA...GGAGATGCTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGAAAGCATCGCGCTGGATaGAGGCTTTCCCACAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLQHTGENSLSPYLRKHRAG*RLSHNA Trigger: AGCATTGTGGGAAAGCCTTCATCCAGCGCGATGCTT...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTTAGGGCCTACAGAGAGAAAAGAACAGACCAGACCTCTGAAAGCTGTAAGGCTTTCTCAACTTaGTTCCATTCACGGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRAYREKRTDQTSESCKAFST*FHSRSL Trigger: TAAACTCCGTGAATGGAAGCAAGTTGAGAAAGCCTT...ACAGCTTTCAGAGGTCTGGTCTGTTCTTTTCTCTCTGTAGGCCCTAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAAGTCAGAGGCAAACCTTGGAAATTCAGTTCTCTCTCTTCACATGGAGAGCTTCTTTTGACTaGAATCCAGCAGAGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ICTSQRQTLEIQFSLFTWRASFD*NPAEPT Trigger: AGTGGGCTCTGCTGGATTCCAGTCAAAAGAAGCTCT...CCATGTGAAGAGAGAGAACTGAATTTCCAAGGTTTGCCTCTGACTTGTACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACATAGACAAAGAACCTaGAGGAGGGAGGACGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLQHTGENSLSPYLRHRQRT*RREDER Trigger: CCGTTCGTCCTCCCTCCTCCAGGTTCTTTGTCTATG...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| 3UTR CAA 72 bp | CCGGTCAGAATTAAGACTCCTATAGGCTTCATTAGATaGCTTATTTTGATAGGGTGTCTCTCGAGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVRIKTPIGFIR*LILIGCLSRRT Trigger: AGTCCTCCTCGAGAGACACCCTATCAAAATAAGCAATCTAATGAAGCCTATAGGAGTCTTAATTCTGACCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTCTCTGAGGTGCACTTCTaGGAGGGAATGAACAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQIPQNQTFKGKHLFGVLSEVHF*EGMNKD Trigger: ATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGA...GAGCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| 3UTR CAA 72 bp | AAATGGTTCCTCTCCAATGGTGATTCTCTCATATATTaGACCGTAACTGTACCTCCAGAAGGCTTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KWFLSNGDSLIY*TVTVPPEGFLN Trigger: GTTGAGAAAGCCTTCTGGAGGTACAGTTACGGTCAAATATATGAGAGAATCACCATTGGAGAGGAACCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCTCACTTCTGAGAGGGAATaGACAAGGATGTCTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQIPQNQTFKGKHLFGVLTSERE*TRMSLA Trigger: TGCTAGAGACATCCTTGTTCATTCCCTCTCAGAAGT...GAGCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGAAGCATTTATTTGGAGTGCTCAGTTTTCTTGCTTTTACAACACACAGGGACTTTGCTTTGTCTaGAAGGACTCAGAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QREAFIWSAQFSCFYNTQGLCFV*KDSEEV Trigger: TACTTCTTCTGAGTCCTTTCAGACAAAGCAAAGTCC...CTGTGTGTTGTAAAAGCAAGAAAACTGAGCACTCCAAATAAATGCTTCCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACAAGTTTATCTCCAGTGTaGATTTGCTCACAATACCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLAFTTHRREFPFTLFETSLSPV*ICSQYR Trigger: CCGGTATTGTGAGCAAATTCACACTGGAGATAAACT...TGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR GCA 90 bp | ATGCACAAATTCCACAAAATCAGACTTTCAAAGGGAAGCATTTATTTGGAGTGCAAGGCTTCACCATACTaGTTACACACAAATGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHKFHKIRLSKGSIYLECKASPY*LHTNGS Trigger: GGAACCATTTGTGTGTAAGCAGTATGGTGAAGCCTT...GCACTCCAAATAAATGCTTCCCTTTGAAAGTCTGATTTTGTGGAATTTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| 3UTR CAA 72 bp | ATTAAGACTCCTATAGGCTTCATTAGATTGCTTATTTaGATAGGGTGTCTCTCGAGGAGGACTTTGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPIGFIRLLI*IGCLSRRTLLC Trigger: ACAAAGCAAAGTCCTCCTCGAGAGACACCCTATCAAAATAAGCAATCTAATGAAGCCTATAGGAGTCTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGAATTCTTTCATGGTTCTaGAGGGATGAGGAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLQHTGENSLSPYLRILSWF*RDEEYL Trigger: CAGATATTCCTCATCCCTTCAGAACCATGAAAGAAT...TCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGCCTTAGCACATTTGATGGAACTCGTTTTTATCCAACATCACATTTCACTGCTTACACACAAATaGTTCCTCTCCAATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSALAHLMELVFIQHHISLLTHK*FLSNGD Trigger: ATCACCATTGGAGAGGAACCATTTGTGTGTAAGCAG...TGAAATGTGATGTTGGATAAAAACGAGTTCCATCAAATGTGCTAAGGCACTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGCTTTTACAACACACAGGAGAGAATTCCCTTTCACCTTATTTGAGACATGTGGAGACCCTAAATaGTTTCCCACAATAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: FLAFTTHRREFPFTLFETCGDPK*FPTIIT Trigger: TGTAATTATTGTGGGAAAGCATTTAGGGTCTCCACA...TGTCTCAAATAAGGTGAAAGGGAATTCTCTCCTGTGTGTTGTAAAAGCAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| 3UTR CAA 72 bp | CATCTTAAGGTCTATTCCAGCTATTTCTTTCCCAATTaGTCTTTAATTACACCTATGAGACTAGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLKVYSSYFFPN*SLITPMRLERW Trigger: CCATCTTTCTAGTCTCATAGGTGTAATTAAAGACAAATTGGGAAAGAAATAGCTGGAATAGACCTTAAGATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGCTCCTGGGGAATGTGATGCCTCTGACTGCTGTGTGCTCCAGCCCTCAGAGGAGGACTTTGCTTaGTCTGAAAGGACTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPAPGECDASDCCVLQPSEEDFA*SERTQK Trigger: CTTCTGAGTCCTTTCAGACAAAGCAAAGTCCTCCTC...TGAGGGCTGGAGCACACAGCAGTCAGAGGCATCACATTCCCCAGGAGCTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCGCCTGTTTCAAAAGCAGCCTGAGTTCCTTCTTAGGGCCTACAGAGAGTCTGTAGAGCTTCTTTaGACTGGAATCCAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRRLFQKQPEFLLRAYRESVELL*TGIQQS Trigger: GCTCTGCTGGATTCCAGTCAAAAGAAGCTCTACAGA...CTCTCTGTAGGCCCTAAGAAGGAACTCAGGCTGCTTTTGAAACAGGCGCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS TCA 90 bp | AAGGACTCAGAAGAAGTAGACTCTTTGCAACACTTCACATATTCCTaGGACCCACAGGGTTTCTCTGCAGTTTCACATCTGAGGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KDSEEVDSLQHFTYS*DPQGFSAVSHLRCT Trigger: AGTGCACCTCAGATGTGAAACTGCAGAGAAACCCTGTGGGTCTCAGGAATATGTGAAGTGTTGCAAAGAGTCTACTTCTTCTGAGTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000157017.2 |
||
| CDS-3UTR CAA 90 bp | TGCAATTTTCTAGCATCTCCTTCTCCAATGAGTAAATGGCATGAGGCAGGGACATCTGTAGAGCTTCTTTaGACTGGAATCCAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CNFLASPSPMSKWHEAGTSVELL*TGIQQS Trigger: GCTCTGCTGGATTCCAGTCAAAAGAAGCTCTACAGA...TGTCCCTGCCTCATGCCATTTACTCATTGGAGAAGGAGATGCTAGAAAATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 |
||
| CDS-3UTR CAA 90 bp | GGGCAAGTGCTTTTATCCCTGAGCCATCTGACTGACCCTGCATACACTTTTCCTGAAGAAGTAGACTCTTaGCAACACTTCACATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQVLLSLSHLTDPAYTFPEEVDS*QHFTYS Trigger: GGAATATGTGAAGTGTTGCAAAGAGTCTACTTCTTC...AGGAAAAGTGTATGCAGGGTCAGTCAGATGGCTCAGGGATAAAAGCACTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS TCA 90 bp | GGTTTCTCTGCAGTTTCACATCTGAGGTGCACTTCTGAGAGGGAATaGACAAGGATGTCTCTAGCAAGCACACTGTTTTTACACACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GFSAVSHLRCTSERE*TRMSLASTLFLHTD Trigger: ATCAGTGTGTAAAAACAGTGTGCTTGCTAGAGACATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGATGTGAAACTGCAGAGAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 90 bp | AACCTGGAGGAGGGAGGACGAACGGCACGACTGATTTTGCTTCTGTaGGAATTTGTAAATATAAATGAGCCAACTGAACATTCAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLEEGGRTARLILLL*EFVNINEPTEHSTQ Trigger: CTGGGTTGAATGTTCAGTTGGCTCATTTATATTTACAAATTCTCACAGAAGCAAAATCAGTCGTGCCGTTCGTCCTCCCTCCTCCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| CDS-3UTR CAA 90 bp | ATTCAGTTCTCTCTCTTCACATGGGTTCTGAGGTTCCAACTATGGCTACCAAGCATTAGATTGCTTATTTaGATAGGGTGTCTCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IQFSLFTWVLRFQLWLPSIRLLI*IGCLSR Trigger: CCTCGAGAGACACCCTATCAAAATAAGCAATCTAAT...GCTTGGTAGCCATAGTTGGAACCTCAGAACCCATGTGAAGAGAGAGAACTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGCCTTAGCACATTTGATGGAACTCGTTTTTATCCAACATCACATTTCACTCTCGAGGAGGACTTaGCTTTGTCTGAAAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: KSALAHLMELVFIQHHISLSRRT*LCLKGL Trigger: GAGTCCTTTCAGACAAAGCAAAGTCCTCCTCGAGAG...TGAAATGTGATGTTGGATAAAAACGAGTTCCATCAAATGTGCTAAGGCACTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087666.11 |
||
| CDS CCA 72 bp | CTCCGTAGTCACAACTCCTCTCAGCCACCAGAGTTCTaGGCCATAGACAAAGAACCTGGAGGAGGGAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LRSHNSSQPPEF*AIDKEPGGGRT Trigger: CGTCCTCCCTCCTCCAGGTTCTTTGTCTATGGCCCAGAACTCTGGTGGCTGAGAGGAGTTGTGACTACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141815.3 |
||
| CDS TCA 72 bp | ACTCTGGAATCCGTTGCCGGGTTTCTCCACACTGACTaGCATCTCCGTAGTCACAACTCCTCTCAGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TLESVAGFLHTD*HLRSHNSSQPP Trigger: TGGTGGCTGAGAGGAGTTGTGACTACGGAGATGTCAGTCAGTGTGGAGAAACCCGGCAACGGATTCCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS CAA 72 bp | AGGCGTGTCTCTACGAATGATACACTCTGGAATCCGTaGCCGGGTTTCTCCACACTGACTGACATCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRVSTNDTLWNP*PGFSTLTDISV Trigger: TACGGAGATGTCAGTCAGTGTGGAGAAACCCGGCAACGGATTCCAGAGTGTATCATTCGTAGAGACACGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 72 bp | CCTGAGACCCACAGGGTTTCTCTGCAGTTTCACATCTaGGGTGCACTTCTGAGAGGGAATGAACAAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: PETHRVSLQFHI*GALLRGNEQGC Trigger: ACATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGATGTGAAACTGCAGAGAAACCCTGTGGGTCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 72 bp | TACACACTGATATTTCAGGAGGCGTGTCTCTACGAATaGTACACTCTGGAATCCGTTGCCGGGTTTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: YTLIFQEACLYE*YTLESVAGFLH Trigger: GTGGAGAAACCCGGCAACGGATTCCAGAGTGTATCATTCGTAGAGACACGCCTCCTGAAATATCAGTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 72 bp | GGGTTTCTCTGCAGTTTCACATCTGAGGTGCACTTCTaGGAGGGAATGAACAAGGATGTCTCTAGCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GFLCSFTSEVHF*EGMNKDVSSKH Trigger: GTGCTTGCTAGAGACATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGATGTGAAACTGCAGAGAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 72 bp | GCAGTTTCACATCTGAGGTGCACTTCTGAGAGGGAATaGACAAGGATGTCTCTAGCAAGCACACTGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AVSHLRCTSERE*TRMSLASTLFL Trigger: TAAAAACAGTGTGCTTGCTAGAGACATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGATGTGAAACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||
| CDS TCA 72 bp | AAGGATGTCTCTAGCAAGCACACTGTTTTTACACACTaGTATTTCAGGAGGCGTGTCTCTACGAATGATACA | + |
|
Preference number: 6 (lower is better) Translates to: KDVSSKHTVFTH*YFRRRVSTNDT Trigger: TGTATCATTCGTAGAGACACGCCTCCTGAAATATCAGTGTGTAAAAACAGTGTGCTTGCTAGAGACATCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087666.11 ENSMUST00000141815.3 ENSMUST00000157017.2 |
||