Pregenerated sensors for ZFP950 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074733Ensembl transcript IDs: ENSMUST00000122927.8, ENSMUST00000127117.8, ENSMUST00000127290.8, ENSMUST00000143264.8, ENSMUST00000180544.3, ENSMUST00000205712.2, ENSMUST00000205854.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTAAGCAAGGCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCGTaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: AKQGRGSKPVSNIPP*PLHQLLLPDLLEFQ Trigger: CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCACGGAGGGATGTTACTTACTGGCTTGCTTCCCCTGCCTTGCTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR GCA 90 bp | AGGAAGGGACCAGGGAAAGTTATAGCCTTTGCCTGCCCAGGTGACTaGGCAGGGTGGAAAGATTGGGGAGCCATATGCCATGCTTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RKGPGKVIAFACPGD*AGWKDWGAICHAFQ Trigger: CTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAAGGCTATAACTTTCCCTGGTCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR CCA 90 bp | CCAGGGAAAGTTATAGCCTTTGCCTGCCCAGGTGACTGCGCAGGGTaGAAAGATTGGGGAGCCATATGCCATGCTTTTCAGCTTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: PGKVIAFACPGDCAG*KDWGAICHAFQLLA Trigger: GGCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAAGGCTATAACTTTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR GCA 90 bp | GCCTGCCCAGGTGACTGCGCAGGGTGGAAAGATTGGGGAGCCATATaGCATGCTTTTCAGCTTCTTGCCACAGTACTGATTTCTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: ACPGDCAGWKDWGAI*HAFQLLATVLISEQ Trigger: CTGTTCAGAAATCAGTACTGTGGCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR CCA 90 bp | GTTATAGCCTTTGCCTGCCCAGGTGACTGCGCAGGGTGGAAAGATTaGGGAGCCATATGCCATGCTTTTCAGCTTCTTGCCACAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: VIAFACPGDCAGWKD*GAICHAFQLLATVL Trigger: CAGTACTGTGGCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAAGGCTATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR TCA 90 bp | GTCTGCGTCTGCAGCCTGGTTTCACTTCAGTTTCTCACAGCAAGATaGTGCAGGTCCCTTGGGCCCTGTTTCCTTTCTTGTGACCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: VCVCSLVSLQFLTAR*CRSLGPCFLSCDLH Trigger: GTGAAGGTCACAAGAAAGGAAACAGGGCCCAAGGGACCTGCATCATCTTGCTGTGAGAAACTGAAGTGAAACCAGGCTGCAGACGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR TCA 90 bp | TGCGTAGGCAGACATAGGGCTAGAGGAGCCAAGGGTTCTATATCTTaGTCTGAAGGTAGCCAGGAAGAGACTTTCCACACTGGGTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: CVGRHRARGAKGSIS*SEGSQEETFHTGWS Trigger: ACTCCACCCAGTGTGGAAAGTCTCTTCCTGGCTACCTTCAGATCAAGATATAGAACCCTTGGCTCCTCTAGCCCTATGTCTGCCTACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR TCA 90 bp | AGAGACTTTCCACACTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTaGTGCATTTCCTCCAACATGGCCACACTTACTCCAACAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: RDFPHWVEFQSLCPQ*CISSNMATLTPTRS Trigger: TGACCTTGTTGGAGTAAGTGTGGCCATGTTGGAGGAAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAGTGTGGAAAGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR CCA 90 bp | GTGTCTGGGATCTACACATGGTCTTCTGGGCTCCTCCAAAGGGCTTaGGTCATTTCTCCAACTCTGTCCTGTTGTAGAACTCCAGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: VSGIYTWSSGLLQRA*VISPTLSCCRTPGL Trigger: TAAACCTGGAGTTCTACAACAGGACAGAGTTGGAGAAATGACCCAAGCCCTTTGGAGGAGCCCAGAAGACCATGTGTAGATCCCAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR CCA 90 bp | GGTATCCATGGCAACGTTAACTTTACAGCTTCTTGTTCCAGTGTCTaGGATCTACACATGGTCTTCTGGGCTCCTCCAAAGGGCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GIHGNVNFTASCSSV*DLHMVFWAPPKGLG Trigger: ACCCAAGCCCTTTGGAGGAGCCCAGAAGACCATGTGTAGATCCCAGACACTGGAACAAGAAGCTGTAAAGTTAACGTTGCCATGGATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR TCA 90 bp | CACAGCAAGATGATGCAGGTCCCTTGGGCCCTGTTTCCTTTCTTGTaGCCTTCACTTTATCACCTGGGTTCTTGTAGGCTGTCTTATCCT | + |
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Preference number: 1 (lower is better) Translates to: HSKMMQVPWALFPFL*PSLYHLGSCRLSYP Trigger: AGGATAAGACAGCCTACAAGAACCCAGGTGATAAAGTGAAGGTCACAAGAAAGGAAACAGGGCCCAAGGGACCTGCATCATCTTGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR TCA 90 bp | ATTGGGGCATATAATCCTTGCAAGACCAAGGACCTCTCCTCCCAATaGTGGCCAATTAGGCCATCTTCTGCTACATATGCAGCTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: IGAYNPCKTKDLSSQ*WPIRPSSATYAARD Trigger: GTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAATTGGCCATCATTGGGAGGAGAGGTCCTTGGTCTTGCAAGGATTATATGCCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR CCA 90 bp | CTCCTTTCAGCTTTGTTGACTGCAACAAATTTCTTTTTCAAGGGCTaGTTCCACTCCCTGCTAGCAACTTTCCATGGCAGGTATCCCATG | + |
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Preference number: 1 (lower is better) Translates to: LLSALLTATNFFFKG*FHSLLATFHGRYPM Trigger: CATGGGATACCTGCCATGGAAAGTTGCTAGCAGGGAGTGGAACCAGCCCTTGAAAAAGAAATTTGTTGCAGTCAACAAAGCTGAAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR CCA 90 bp | CAATACCTCTGTGTGGAGTTGCTTCAATTGTGGCAAGCTAGCCACTaGGCAAGAAATGCCCTAACACTATCTGTCCAAAAAGGACACATG | + |
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Preference number: 1 (lower is better) Translates to: QYLCVELLQLWQASH*ARNALTLSVQKGHM Trigger: CATGTGTCCTTTTTGGACAGATAGTGTTAGGGCATTTCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR TCA 90 bp | ATGAGCTGGGCAGAAATCTTCACCTTTTTGCTATTAGAGTTGGCCTaGTGCTACTTGTACTCTGATACTAATACTGGTTCCTCAAGATCT | + |
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Preference number: 1 (lower is better) Translates to: MSWAEIFTFLLLELA*CYLYSDTNTGSSRS Trigger: AGATCTTGAGGAACCAGTATTAGTATCAGAGTACAAGTAGCATCAGGCCAACTCTAATAGCAAAAAGGTGAAGATTTCTGCCCAGCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR CCA 90 bp | ATTATCTTTGGAAATGCTCTCTGCTCCCTACCTAATGATGCACTATaGGATGCTGGCTTGATGGTAATTAAAATAGTATGGCCTGGAACA | + |
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Preference number: 1 (lower is better) Translates to: IIFGNALCSLPNDAL*DAGLMVIKIVWPGT Trigger: TGTTCCAGGCCATACTATTTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCAGAGAGCATTTCCAAAGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR CCA 90 bp | TTTTTAACTAGCAAGTCCTATATGGTTCACTGGACACAGTGCATGTaGCTGAGAAGTCTAGACATAGAGGCTGTTTTGTGTGAAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: FLTSKSYMVHWTQCM*LRSLDIEAVLCEEV Trigger: AACTTCTTCACACAAAACAGCCTCTATGTCTAGACTTCTCAGCCACATGCACTGTGTCCAGTGAACCATATAGGACTTGCTAGTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR CCA 90 bp | GTTACTGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTaGCTGATTTTGTGTGTTAACTTGACACAAGTTGGAGTTACCATA | + |
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Preference number: 1 (lower is better) Translates to: VTGPKGCYFGKEVLY*LILCVNLTQVGVTI Trigger: TATGGTAACTCCAACTTGTGTCAAGTTAACACACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR CCA 90 bp | TGGAGAAAATATGTCACTTGGAGTGGACTTGAGTGTTTATGGATATaGATATACACCATTTCTAGTTCCCACTCTCTGCTTCATGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: WRKYVTWSGLECLWI*IYTISSSHSLLHAV Trigger: AACAGCATGAAGCAGAGAGTGGGAACTAGAAATGGTGTATATCCATATCCATAAACACTCAAGTCCACTCCAAGTGACATATTTTCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| 3UTR TCA 90 bp | CCAATCAATAGCAGCTCGATTACAATAAGTTCTTGTCATTTCCACTaGCCTGAGTTTGAGTTGTGTTGGATCTCAGTAAACCCAATAACA | + |
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Preference number: 1 (lower is better) Translates to: PINSSSITISSCHFH*PEFELCWISVNPIT Trigger: TGTTATTGGGTTTACTGAGATCCAACACAACTCAAACTCAGGTCAGTGGAAATGACAAGAACTTATTGTAATCGAGCTGCTATTGATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| 3UTR TCA 90 bp | CAGAGCTCATTCATTAGTGCGGCTATCTCTGTTCTTTCAGGTTTGTaGAGCCCCTCATACAATTTATATTGCATCTTTATATTTTGCATA | + |
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Preference number: 1 (lower is better) Translates to: QSSFISAAISVLSGL*SPSYNLYCIFIFCI Trigger: TATGCAAAATATAAAGATGCAATATAAATTGTATGAGGGGCTTCACAAACCTGAAAGAACAGAGATAGCCGCACTAATGAATGAGCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR GCA 90 bp | TTCGTCATGGTGTTTTATGCAGGAATAGAAACCCTGACTAAGACATaGTCTATATTTTTGTTGACAAACAAACAAACAACAACAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: FVMVFYAGIETLTKT*SIFLLTNKQTTTAT Trigger: TGTTGCTGTTGTTGTTTGTTTGTTTGTCAACAAAAATATAGAGCATGTCTTAGTCAGGGTTTCTATTCCTGCATAAAACACCATGACGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTTCCTCCAACATGGCTCCCTGGCCTCTTGCTaGGGTCCAGCCTCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LGGVSKPVPTVMHFLQHGSLASC*GPASAG Trigger: TCCTGCTGAGGCTGGACCTCAGCAAGAGGCCAGGGA...GCCATGTTGGAGGAAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTTCCTCCAACATGGCGCTAGCAACTTTCCATaGCAGGTATCCCATGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LGGVSKPVPTVMHFLQHGASNFP*QVSHGS Trigger: GGAGCCATGGGATACCTGCCATGGAAAGTTGCTAGC...GCCATGTTGGAGGAAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCACAGTGATGCATTTCCTCCAACATGGCCACACTTACTCCAACAAGGTCACACCCCTTCAGTCCTGTaGTGTCAACTGCACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AHSDAFPPTWPHLLQQGHTPSVL*CQLHLH Trigger: GTGAAGGTGCAGTTGACAGCACAGGACTGAAGGGGT...GTGACCTTGTTGGAGTAAGTGTGGCCATGTTGGAGGAAATGCATCACTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR CAA 90 bp | TTCAACCCACCCACTCTCGTTTCCTGTCCCTGGTATTCCCCTGTATaGGGGCATATAATCCTTGCAAGACCAAGGACCTCTCCTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: FNPPTLVSCPWYSPV*GHIILARPRTSPPN Trigger: ATTGGGAGGAGAGGTCCTTGGTCTTGCAAGGATTATATGCCCCAATACAGGGGAATACCAGGGACAGGAAACGAGAGTGGGTGGGTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGTCTGGGGTACACAGCTaGGGAGGTAGCCAGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVSGVHS*GGSQTS Trigger: GCTGGTCTGGCTACCTCCCCAGCTGTGTACCCCAGA...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTTTCCACACTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTTCTCCTCCAAAGGGCTTaGGTCATTTCTCCAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: ETFHTGWSFKACAHSDAFLLQRA*VISPTL Trigger: CAGAGTTGGAGAAATGACCCAAGCCCTTTGGAGGAG...AAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAGTGTGGAAAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTCACCTCGTCGTGAACAGGAAGCAACAGGAAGGGACCAGGGAAAGTTATCTGTTTCCTTTCTTGTaGCCTTCACTTTATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: SPHLVVNRKQQEGTRESYLFPFL*PSLYHL Trigger: CAGGTGATAAAGTGAAGGTCACAAGAAAGGAAACAG...ATAACTTTCCCTGGTCCCTTCCTGTTGCTTCCTGTTCACGACGAGGTGAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCCTACCTAATGATGCACTATGGGATGCTGGCTTGATGGTAATTAAAATACTTTGCCTGCCCAGGTaGCTGCGCAGGGTGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: CSLPNDALWDAGLMVIKILCLPR*LRRVER Trigger: TCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAAG...TATTTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGTCGTGAACAGGAAGCAACAGGAAGGGACCAGGGAAAGTTATAGCCTTGGAAACAAAATTGTCTaGGTCTGCAGCCTGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: HLVVNRKQQEGTRESYSLGNKIV*VCSLVS Trigger: TGAAACCAGGCTGCAGACGCAGACAATTTTGTTTCC...AAGGCTATAACTTTCCCTGGTCCCTTCCTGTTGCTTCCTGTTCACGACGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATAAACTTTTCCCTGAGTGCCTCAATGTCATTTGTCACTTTGGTTCTCCTAGCCTGCCCAGGTGACTaGGCAGGGTGGAAAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: RINFSLSASMSFVTLVLLACPGD*AGWKDW Trigger: CCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGC...TAGGAGAACCAAAGTGACAAATGACATTGAGGCACTCAGGGAAAAGTTTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTCCCTACCTAATGATGCACTATGGGATGCTGGCTTGATGGTAATTAAAGGTGACTGCGCAGGGTaGAAAGATTGGGGAGCCATA | + |
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Preference number: 2 (lower is better) Translates to: LCSLPNDALWDAGLMVIKGDCAG*KDWGAI Trigger: TATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACC...TTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCACAGTGATGCATTTCCTCCAACATGGCCACACTTACTCCAACAAGGTCACTCTTGTTCCAGTGTCTaGGATCTACACATGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AHSDAFPPTWPHLLQQGHSCSSV*DLHMVF Trigger: GAAGACCATGTGTAGATCCCAGACACTGGAACAAGA...GTGACCTTGTTGGAGTAAGTGTGGCCATGTTGGAGGAAATGCATCACTGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACTTTCCACACTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTTTTGACACCAGACTTTTaGCTGTCCCCAACCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: ETFHTGWSFKACAHSDAFLTPDF*LSPTSI Trigger: AATAGAGGTTGGGGACAGGCAAAAGTCTGGTGTCAA...AAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAGTGTGGAAAGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGGAGACCATGAGCACATaGCAGGAGAACCAGCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVETMST*QENQQV Trigger: TACCTGCTGGTTCTCCTGGCATGTGCTCATGGTCTC...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGACTTTCCTCCCCAATTTaGTTCTTCGTCATGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGLSSPI*FFVMVF Trigger: AAACACCATGACGAAGAAGCAAATTGGGGAGGAAAG...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGAACTGGACCAAAGGGATaGTATTTTGGGAAAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGTGPKG*YFGKEV Trigger: AACCTCTTTCCCAAAATAGCATCCCTTTGGTCCAGT...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCTCGTCGTGAACAGGAAGCAACAGGAAGGGACCAGGGAAAGTTATAGCGGCTGTCTTATCCTCTaGAAGTTATCCAGAAATATA | + |
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Preference number: 2 (lower is better) Translates to: PHLVVNRKQQEGTRESYSGCLIL*KLSRNI Trigger: TATATTTCTGGATAACTTTCAGAGGATAAGACAGCC...GCTATAACTTTCCCTGGTCCCTTCCTGTTGCTTCCTGTTCACGACGAGGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGACTGCAACAAATTTCTTTTTCAAGGGCTGGTTCCACTCCCTGCTAGCAACAGTCTTAAGGGGTCCTaGAGGTCACAGTATCACCAT | + |
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Preference number: 2 (lower is better) Translates to: VDCNKFLFQGLVPLPASNSLKGS*RSQYHH Trigger: ATGGTGATACTGTGACCTTCAGGACCCCTTAAGACT...GTTGCTAGCAGGGAGTGGAACCAGCCCTTGAAAAAGAAATTTGTTGCAGTCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCACAGTGATGCATTTCCTCCAACATGGCCACACTTACTCCAACAAGGTCACCATATTCAAAGCAAATaGACCAGACAGCAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: AHSDAFPPTWPHLLQQGHHIQSK*TRQQAH Trigger: ATGTGCTTGCTGTCTGGTTCATTTGCTTTGAATATG...GTGACCTTGTTGGAGTAAGTGTGGCCATGTTGGAGGAAATGCATCACTGTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
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| 3UTR-3UTR TCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGAGAAGAAAGCATCCATaGGGGGAGAGAGACCATGAG | + |
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Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVRRKHP*GERDHE Trigger: CTCATGGTCTCTCTCCCCTCATGGATGCTTTCTTCT...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGTGGCAAGCTAGCCACTaGGCAAGAAATGCCCTAACA | + |
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Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVWQASH*ARNALT Trigger: TGTTAGGGCATTTCTTGCCCAGTGGCTAGCTTGCCA...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGGAGTTGCTTCAATTGTaGCAAGCTAGCCACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVELLQL*QASHWA Trigger: TGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTC...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGAATTGAACAGGATAAACTTTTCCCTGAGTGCCTCAATGTCATTTGTCTTTCTCACAGCAAGATaGTGCAGGTCCCTTGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ERELNRINFSLSASMSFVFLTAR*CRSLGP Trigger: GGGCCCAAGGGACCTGCATCATCTTGCTGTGAGAAA...GACAAATGACATTGAGGCACTCAGGGAAAAGTTTATCCTGTTCAATTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGTTATACCCAATACCCTaGTCTTCAACCCACCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVLYPIP*SSTHPL Trigger: GAGTGGGTGGGTTGAAGAGCAGGGTATTGGGTATAA...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGATTGACTGCTATACTCTaGCAAGACAGAGCAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGLTAIL*QDRAIF Trigger: AAATATTGCTCTGTCTTGCCAGAGTATAGCAGTCAA...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCCCTACCTAATGATGCACTATGGGATGCTGGCTTGATGGTAATTAAAATAGGGAGCCATATGCCATaGTTTTCAGCTTCTTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CSLPNDALWDAGLMVIKIGSHMP*FSASCH Trigger: GTGGCAAGAAGCTGAAAAGCATGGCATATGGCTCCC...TATTTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGAAGACGCGGCATTCTTTaGTTATTCAAATATGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGRRGIL*LFKYAI Trigger: TATAGCATATTTGAATAAGCAAAGAATGCCGCGTCT...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTTTTAACTATGAGACATGTCTGCTCCTGACAATATACACTTCAAAAAGGGAACCAGCAGGTATCTaGGGTACACAGCTGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RSFNYETCLLLTIYTSKREPAGI*GTQLGR Trigger: CCTCCCCAGCTGTGTACCCCAGATACCTGCTGGTTC...CCTTTTTGAAGTGTATATTGTCAGGAGCAGACATGTCTCATAGTTAAAAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGCAGCCAACTACTAGATaGATTAGAGGTAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: WTKGMLFWERGSVLADFVQPTTR*IRGRWV Trigger: AACCCACCTACCTCTAATCCATCTAGTAGTTGGCTG...CACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTCATTTCTCCAACTCTGTCCTGTTGTAGAACTCCAGGTTTAGGTAGATCCGTTCTTTCAGGTTTGTaGAGCCCCTCATACAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: WVISPTLSCCRTPGLGRSVLSGL*SPSYNL Trigger: TAAATTGTATGAGGGGCTTCACAAACCTGAAAGAAC...GGATCTACCTAAACCTGGAGTTCTACAACAGGACAGAGTTGGAGAAATGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTCACCAGAGACATTTTTaGTTCCTGGAATCATGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSCNRKPACKLEVRKVNPHQRHF*FLESCH Trigger: ATGGCATGATTCCAGGAAGCAAAAATGTCTCTGGTG...AGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTAAGATGACTGTGGTGTaGAAAGGCTTTACCACATTG | + |
|
Preference number: 2 (lower is better) Translates to: GSCNRKPACKLEVRKVNPKMTVV*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACACCACAGTCATCTT...AGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCCACTCTCTGCTTCATaGTGTTCGGCTACCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LARVTESQHVSLKSEKSIPLSAS*CSATKY Trigger: ATATTTGGTAGCCGAACAGCATGAAGCAGAGAGTGG...GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR CAA 90 bp | TATTTTGGGAAAGAGGTTCTGTACTGGCTGATTTTGTGTGTTAACTaGACACAAGTTGGAGTTACCATAGAGAAAGGAGCCTCCCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YFGKEVLYWLILCVN*TQVGVTIEKGASLA Trigger: TGCAAGGGAGGCTCCTTTCTCTATGGTAACTCCAACTTGTGTCAAGTTAACACACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCCTGTTGTAGAACTCCAGGTTTAGGTAGATCCATTCCAGTGCTGTTCTTGACCCAGGTTCTCTTTTaGTCATTCCATAAATCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSCCRTPGLGRSIPVLFLTQVLF*SFHKSV Trigger: TACTGATTTATGGAATGATCAAAAGAGAACCTGGGT...CAAGAACAGCACTGGAATGGATCTACCTAAACCTGGAGTTCTACAACAGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCTCTTGTCATTTCCACTaGCCTGAGTTTGAGTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LARVTESQHVSLKSEKSISCHFH*PEFELC Trigger: ACACAACTCAAACTCAGGTCAGTGGAAATGACAAGA...GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACAACTCTAATCTGCTTGAAATAGCTCTTGCAAACCAGGGCCACTTTCTTTGGACACAGTGCATGTaGCTGAGAAGTCTAGACATA | + |
|
Preference number: 2 (lower is better) Translates to: KDNSNLLEIALANQGHFLWTQCM*LRSLDI Trigger: TATGTCTAGACTTCTCAGCCACATGCACTGTGTCCA...AAGAAAGTGGCCCTGGTTTGCAAGAGCTATTTCAAGCAGATTAGAGTTGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACAACTCTAATCTGCTTGAAATAGCTCTTGCAAACCAGGGCCACTTTCTTCACCAGAGACATTTTTaGTTCCTGGAATCATGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KDNSNLLEIALANQGHFLHQRHF*FLESCH Trigger: ATGGCATGATTCCAGGAAGCAAAAATGTCTCTGGTG...AAGAAAGTGGCCCTGGTTTGCAAGAGCTATTTCAAGCAGATTAGAGTTGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTGCTTCCTGGAATCATGCCATTTCTAATTATCATGGAGTCACTGACCTTGGAACATTCTCCTCAATaGTTCCGGTCTCTTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLLPGIMPFLIIMESLTLEHSPQ*FRSLLN Trigger: ATTAAGAAGAGACCGGAATCATTGAGGAGAATGTTC...CAAGGTCAGTGACTCCATGATAATTAGAAATGGCATGATTCCAGGAAGCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127117.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTTTCAGTTGGAAGACTATAATAGTGTaGAAAGGCTTCACCATACTA | + |
|
Preference number: 2 (lower is better) Translates to: TESQHVSLKSEKSILFSWKTIIV*KGFTIL Trigger: TAGTATGGTGAAGCCTTTGCACACTATTATAGTCTT...CCAACTGAAAAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGTTGGTAGTATTTGGGGGAGATTTAGAAAATGCTGACCTGCTGGAGAAAGGACTTGAGTGTTTATaGATATGGATATACACCATT | + |
|
Preference number: 2 (lower is better) Translates to: FQLVVFGGDLENADLLEKGLECL*IWIYTI Trigger: AATGGTGTATATCCATATCCATAAACACTCAAGTCC...TTTCTCCAGCAGGTCAGCATTTTCTAAATCTCCCCCAAATACTACCAACTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTTTTAACTATGAGACATGTCTGCTCCTGACAATATACACTTCAAAAAGGGGAATTGTTGAGGTTTaGTCCACTGCTATTATGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RSFNYETCLLLTIYTSKRGIVEV*STAIMY Trigger: ATACATAATAGCAGTGGACCAAACCTCAACAATTCC...CCTTTTTGAAGTGTATATTGTCAGGAGCAGACATGTCTCATAGTTAAAAGATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | GGCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCGTaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GRGSKPVSNIPP*PLHQLLLPDLL Trigger: AAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCACGGAGGGATGTTACTTACTGGCTTGCTTCCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | TGCCAGGAGAACCAGCAGGTATCTGGGGTACACAGCTaGGGAGGTAGCCAGACCAGCAGCTTAGACTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQENQQVSGVHS*GGSQTSSLDSR Trigger: TCTTGAGTCTAAGCTGCTGGTCTGGCTACCTCCCCAGCTGTGTACCCCAGATACCTGCTGGTTCTCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACCTCGTCGTGAACAGGAAGCAACAGGAAGGGACCAGGGAAAGTTATAGCCGCAGGGTGGAAAGATaGGGGAGCCATATGCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PHLVVNRKQQEGTRESYSRRVER*GSHMPC Trigger: GCATGGCATATGGCTCCCCAATCTTTCCACCCTGCG...GCTATAACTTTCCCTGGTCCCTTCCTGTTGCTTCCTGTTCACGACGAGGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CCA 72 bp | TTTGCCTGCCCAGGTGACTGCGCAGGGTGGAAAGATTaGGGAGCCATATGCCATGCTTTTCAGCTTCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FACPGDCAGWKD*GAICHAFQLLA Trigger: GGCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CCA 72 bp | GTTATAGCCTTTGCCTGCCCAGGTGACTGCGCAGGGTaGAAAGATTGGGGAGCCATATGCCATGCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VIAFACPGDCAG*KDWGAICHAFQ Trigger: CTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACCTGGGCAGGCAAAGGCTATAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CCA 72 bp | CAAGGGCTGGTTCCACTCCCTGCTAGCAACTTTCCATaGCAGGTATCCCATGGCTCCCACAGCTTTAACATC | + |
|
Preference number: 3 (lower is better) Translates to: QGLVPLPASNFP*QVSHGSHSFNI Trigger: GATGTTAAAGCTGTGGGAGCCATGGGATACCTGCCATGGAAAGTTGCTAGCAGGGAGTGGAACCAGCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | TGGCTACAGCCAACTACTAGATGGATTAGAGGTAGGTaGGTTTGGAGTGACCAGGTTGGGGGAGGAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: WLQPTTRWIRGR*VWSDQVGGGEM Trigger: CATCTCTCCTCCCCCAACCTGGTCACTCCAAACCCACCTACCTCTAATCCATCTAGTAGTTGGCTGTAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGATGGTTGCTCAGCTACATGTGTTGGGGCAAGAACATCATGGTGATGGGGATGATGCAGGTCCCTaGGGCCCTGTTTCCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLMVAQLHVLGQEHHGDGDDAGP*GPVSFL Trigger: AAGAAAGGAAACAGGGCCCAAGGGACCTGCATCATC...CCCATCACCATGATGTTCTTGCCCCAACACATGTAGCTGAGCAACCATCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR GCA 72 bp | GGTGACTGCGCAGGGTGGAAAGATTGGGGAGCCATATaGCATGCTTTTCAGCTTCTTGCCACAGTACTGATT | + |
|
Preference number: 3 (lower is better) Translates to: GDCAGWKDWGAI*HAFQLLATVLI Trigger: AATCAGTACTGTGGCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CCA 72 bp | TCTTGTTCCAGTGTCTGGGATCTACACATGGTCTTCTaGGCTCCTCCAAAGGGCTTGGGTCATTTCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SCSSVWDLHMVF*APPKGLGHFSN Trigger: GTTGGAGAAATGACCCAAGCCCTTTGGAGGAGCCCAGAAGACCATGTGTAGATCCCAGACACTGGAACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR TCA 72 bp | CAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTGATGAACAGCAATGTGGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QLLLPDLLEFQS*LPLVMNSNVES Trigger: ACTTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | TTACAGCTTCTTGTTCCAGTGTCTGGGATCTACACATaGTCTTCTGGGCTCCTCCAAAGGGCTTGGGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LQLLVPVSGIYT*SSGLLQRAWVI Trigger: AATGACCCAAGCCCTTTGGAGGAGCCCAGAAGACCATGTGTAGATCCCAGACACTGGAACAAGAAGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | TCTGAAGGTAGCCAGGAAGAGACTTTCCACACTGGGTaGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SEGSQEETFHTG*SFKACAHSDAF Trigger: AAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAGTGTGGAAAGTCTCTTCCTGGCTACCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTTTCCACACTGGGTGGAGTTTCAAAGCCTGTGCCCACAGTGATGCATTTCACAGTATCACCATATaGGTGAGGATCACCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ETFHTGWSFKACAHSDAFHSITI*VRITRD Trigger: GTCTCTGGTGATCCTCACCAATATGGTGATACTGTG...AAATGCATCACTGTGGGCACAGGCTTTGAAACTCCACCCAGTGTGGAAAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR GCA 72 bp | ACAAGTTGGAGTTACCATAGAGAAAGGAGCCTCCCTTaGAGAAATGCCTCCATGAGATCCAGCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSWSYHRERSLP*RNASMRSSCKA Trigger: TGCCTTACAGCTGGATCTCATGGAGGCATTTCTGCAAGGGAGGCTCCTTTCTCTATGGTAACTCCAACTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | ATCTACACATGGTCTTCTGGGCTCCTCCAAAGGGCTTaGGTCATTTCTCCAACTCTGTCCTGTTGTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: IYTWSSGLLQRA*VISPTLSCCRT Trigger: AGTTCTACAACAGGACAGAGTTGGAGAAATGACCCAAGCCCTTTGGAGGAGCCCAGAAGACCATGTGTAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | GGCAACGTTAACTTTACAGCTTCTTGTTCCAGTGTCTaGGATCTACACATGGTCTTCTGGGCTCCTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GNVNFTASCSSV*DLHMVFWAPPK Trigger: CTTTGGAGGAGCCCAGAAGACCATGTGTAGATCCCAGACACTGGAACAAGAAGCTGTAAAGTTAACGTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGACAAAGGGATGCTATTTaGGGAAAGAGGTTCTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGQRDAI*GKRFCT Trigger: AGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTG...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGCAGAGAGAACATTCTCCTCAATGATTCCGGTCTCTTCTTAATCACTGCTATGGAGTCACTGACCTaGGCAGAGAGAACATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGRENILLNDSGLFLITAMESLT*AERTFS Trigger: GGAGAATGTTCTCTCTGCCAAGGTCAGTGACTCCAT...AGCAGTGATTAAGAAGAGACCGGAATCATTGAGGAGAATGTTCTCTCTGCCAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127117.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGAGAGACGCGGCATTCTTaGCTTATTCAAATATGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGETRHS*LIQICY Trigger: ATAGCATATTTGAATAAGCAAAGAATGCCGCGTCTC...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR TCA 72 bp | GGTGGTCATCCCATGGTACTGACATCTCTGATATGCTaGTGCCTTCTGCTGCAACTAGTAGGCTTCATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGHPMVLTSLIC*CLLLQLVGFIN Trigger: ATTGATGAAGCCTACTAGTTGCAGCAGAAGGCATCAGCATATCAGAGATGTCAGTACCATGGGATGACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR TCA 72 bp | AGACATAGGGCTAGAGGAGCCAAGGGTTCTATATCTTaGTCTGAAGGTAGCCAGGAAGAGACTTTCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: RHRARGAKGSIS*SEGSQEETFHT Trigger: AGTGTGGAAAGTCTCTTCCTGGCTACCTTCAGATCAAGATATAGAACCCTTGGCTCCTCTAGCCCTATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | GAACATCAATACCTCTGTGTGGAGTTGCTTCAATTGTaGCAAGCTAGCCACTGGGCAAGAAATGCCCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: EHQYLCVELLQL*QASHWARNALT Trigger: TGTTAGGGCATTTCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTGATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAACTCATGTTTTCAGAGTTCTTTCCCACAGTCTTAAGGGGTCCTGAAGGTCACAGTATCACCATATaGGTGAGGATCACCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VELMFSEFFPTVLRGPEGHSITI*VRITRD Trigger: GTCTCTGGTGATCCTCACCAATATGGTGATACTGTG...ACCTTCAGGACCCCTTAAGACTGTGGGAAAGAACTCTGAAAACATGAGTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127290.8 ENSMUST00000205854.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTGTTGTAGAACTCCAGGTTTAGGTAGATCCATTCCAGTGCTGTTCTTGATACCAAGAACTTCTTaGCATGACCCCTTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSCCRTPGLGRSIPVLFLIPRTS*HDPFSP Trigger: AGGACTGAAGGGGTCATGCAAAGAAGTTCTTGGTAT...CAAGAACAGCACTGGAATGGATCTACCTAAACCTGGAGTTCTACAACAGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR TCA 72 bp | GTGAATGGGAACAGTGAAAGAATAACTTGGAGACAGTaGTGGATGCCAGCTGACAGCTCTGTAATCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VNGNSERITWRQ*WMPADSSVICS Trigger: TGAGCAGATTACAGAGCTGTCAGCTGGCATCCATCACTGTCTCCAAGTTATTCTTTCACTGTTCCCATTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR TCA 72 bp | TATAATCCTTGCAAGACCAAGGACCTCTCCTCCCAATaGTGGCCAATTAGGCCATCTTCTGCTACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YNPCKTKDLSSQ*WPIRPSSATYA Trigger: TGCATATGTAGCAGAAGATGGCCTAATTGGCCATCATTGGGAGGAGAGGTCCTTGGTCTTGCAAGGATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | AGCAAGTCCTATATGGTTCACTGGACACAGTGCATGTaGCTGAGAAGTCTAGACATAGAGGCTGTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSYMVHWTQCM*LRSLDIEAVLC Trigger: ACACAAAACAGCCTCTATGTCTAGACTTCTCAGCCACATGCACTGTGTCCAGTGAACCATATAGGACTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | TGTGTGGAGTTGCTTCAATTGTGGCAAGCTAGCCACTaGGCAAGAAATGCCCTAACACTATCTGTCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CVELLQLWQASH*ARNALTLSVQK Trigger: TTTTTGGACAGATAGTGTTAGGGCATTTCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR GCA 72 bp | TTAACTAGCAAGTCCTATATGGTTCACTGGACACAGTaGATGTGGCTGAGAAGTCTAGACATAGAGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSKSYMVHWTQ*MWLRSLDIEAV Trigger: AACAGCCTCTATGTCTAGACTTCTCAGCCACATGCACTGTGTCCAGTGAACCATATAGGACTTGCTAGTTAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCCTACCTAATGATGCACTATGGGATGCTGGCTTGATGGTAATTAAAATATTTCTGGAAACAAAATaGTCTGCGTCTGCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSLPNDALWDAGLMVIKIFLETK*SASAAW Trigger: CCAGGCTGCAGACGCAGACAATTTTGTTTCCAGAAA...TATTTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCTCACCAGAGACATTTTaGCTTCCTGGAATCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LARVTESQHVSLKSEKSISPETF*LPGIMP Trigger: TGGCATGATTCCAGGAAGCAAAAATGTCTCTGGTGA...GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
||
| 3UTR GCA 72 bp | CTCCTAAAACCATTAATTATCTTTGGAAATGCTCTCTaGTCCCTACCTAATGATGCACTATGGGATGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKPLIIFGNAL*SLPNDALWDAG Trigger: GCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCAGAGAGCATTTCCAAAGATAATTAATGGTTTTAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR GCA 72 bp | AAGCAAAACAGAAAACCATCTGGGCTAATTCTGAACTaGACCTCCATGTCTGATATCCACTCCTTTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KQNRKPSGLILN*TSMSDIHSFQL Trigger: AAGCTGAAAGGAGTGGATATCAGACATGGAGGTGCAGTTCAGAATTAGCCCAGATGGTTTTCTGTTTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR GCA 72 bp | AAAAGGATAATGAACATCAATACCTCTGTGTGGAGTTaGTTCAATTGTGGCAAGCTAGCCACTGGGCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KRIMNINTSVWS*FNCGKLATGQE Trigger: TTCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTGATGTTCATTATCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | GGAAATGCTCTCTGCTCCCTACCTAATGATGCACTATaGGATGCTGGCTTGATGGTAATTAAAATAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: GNALCSLPNDAL*DAGLMVIKIVW Trigger: CCATACTATTTTAATTACCATCAAGCCAGCATCCCATAGTGCATCATTAGGTAGGGAGCAGAGAGCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CCA 72 bp | ACTTCAAAAAGGATAATGAACATCAATACCTCTGTGTaGAGTTGCTTCAATTGTGGCAAGCTAGCCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TSKRIMNINTSV*SCFNCGKLATG Trigger: CCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTGATGTTCATTATCCTTTTTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATCATGCCATTTCTAATTATCATGGAGTCACTGACCTTGGCAGAGAGAACAGCCAGCATGTAAGCTaGAAGTCAGAAAAGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: WNHAISNYHGVTDLGRENSQHVS*KSEKSI Trigger: GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCT...GTTCTCTCTGCCAAGGTCAGTGACTCCATGATAATTAGAAATGGCATGATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCAGCCAGCATGTAAGCTaGAAGTCAGAAAAGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LARVTESQHVSLKSEKSISQHVS*KSEKSI Trigger: GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCT...GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 ENSMUST00000180544.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTAACTCAGGTGTTGAGGCTTACCTAGAGTTTCTCTTCATCATGAATTGGATTTCTTTCATGCCTTaGAAGATGACTGTGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SCNSGVEAYLEFLFIMNWISFMP*KMTVVC Trigger: GCACACCACAGTCATCTTCAAAGGCATGAAAGAAAT...CCAATTCATGATGAAGAGAAACTCTAGGTAAGCCTCAACACCTGAGTTACAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR GCA 72 bp | GGATATGGATATACACCATTTCTAGTTCCCACTCTCTaGTTCATGCTGTTCGGCTACCAAATATTTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GYGYTPFLVPTL*FMLFGYQIFSV Trigger: CACAGAAAATATTTGGTAGCCGAACAGCATGAAGCAGAGAGTGGGAACTAGAAATGGTGTATATCCATATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR CCA 72 bp | CCAAAGGGATGCTATTTTGGGAAAGAGGTTCTGTACTaGCTGATTTTGTGTGTTAACTTGACACAAGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PKGCYFGKEVLY*LILCVNLTQVG Trigger: TCCAACTTGTGTCAAGTTAACACACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | ATGACTTTAGGTTACTGGACCAAAGGGATGCTATTTTaGGAAAGAGGTTCTGTACTGGCTGATTTTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MTLGYWTKGMLF*ERGSVLADFVC Trigger: ACACACAAAATCAGCCAGTACAGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCAGTAACCTAAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR TCA 72 bp | AGCAGCTCGATTACAATAAGTTCTTGTCATTTCCACTaGCCTGAGTTTGAGTTGTGTTGGATCTCAGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSSITISSCHFH*PEFELCWISVN Trigger: GTTTACTGAGATCCAACACAACTCAAACTCAGGTCAGTGGAAATGACAAGAACTTATTGTAATCGAGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR TCA 72 bp | GACAACAACCCTGGTGGAGGTAGTATAAGAATACACTaGCCCATTCGTATTAGATATGTTTCCTGTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: DNNPGGGSIRIH*PIRIRYVSCYF Trigger: AAAATAACAGGAAACATATCTAATACGAATGGGTCAGTGTATTCTTATACTACCTCCACCAGGGTTGTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR TCA 72 bp | TTGACCAAATCATTGTCTTCTTCTTTAGTATCTTTCTaGCAGAGCTCATTCATTAGTGCGGCTATCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTKSLSSSLVSF*QSSFISAAISV Trigger: AACAGAGATAGCCGCACTAATGAATGAGCTCTGTCAGAAAGATACTAAAGAAGAAGACAATGATTTGGTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CCA 72 bp | GCTATATCATCTATACTTTTGATGACTTTAGGTTACTaGACCAAAGGGATGCTATTTTGGGAAAGAGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AISSILLMTLGY*TKGMLFWERGS Trigger: AGAACCTCTTTCCCAAAATAGCATCCCTTTGGTCCAGTAACCTAAAGTCATCAAAAGTATAGATGATATAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CCA 72 bp | AGAAAATATGTCACTTGGAGTGGACTTGAGTGTTTATaGATATGGATATACACCATTTCTAGTTCCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKYVTWSGLECL*IWIYTISSSHS Trigger: AGAGTGGGAACTAGAAATGGTGTATATCCATATCCATAAACACTCAAGTCCACTCCAAGTGACATATTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR TCA 72 bp | TTCATTAGTGCGGCTATCTCTGTTCTTTCAGGTTTGTaGAGCCCCTCATACAATTTATATTGCATCTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: FISAAISVLSGL*SPSYNLYCIFI Trigger: TATAAAGATGCAATATAAATTGTATGAGGGGCTTCACAAACCTGAAAGAACAGAGATAGCCGCACTAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR GCA 72 bp | GAAATAGCTCTTGCAAACCAGGGCCACTTTCTTATTTaGATAAGCTACTTCCTTAGTAACTGTTTAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: EIALANQGHFLI*ISYFLSNCLII Trigger: AATGATTAAACAGTTACTAAGGAAGTAGCTTATGCAAATAAGAAAGTGGCCCTGGTTTGCAAGAGCTATTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127290.8 |
||
| 3UTR CAA 72 bp | TCCTTGGCTTGGGGGTCGAAGGAGAACCATGAGGGGTaGAAGGTGAATGGAAGAGAAAGAAGCCTCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAWGSKENHEG*KVNGRERSLHG Trigger: CCCATGGAGGCTTCTTTCTCTTCCATTCACCTTCAACCCCTCATGGTTCTCCTTCGACCCCCAAGCCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR CCA 90 bp | CTGCGCAGGGTGGAAAGATTGGGGAGCCATATGCCATGCTTTTCAGCTTCTTGCCACTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRVERLGSHMPCFSASCHFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGTG...GCAAGAAGCTGAAAAGCATGGCATATGGCTCCCCAATCTTTCCACCCTGCGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CAA 72 bp | GTCTTAAGGGGTCCTGAAGGTCACAGTATCACCATATaGGTGAGGATCACCAGAGACATTTTTGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRGPEGHSITI*VRITRDIFASW Trigger: CCAGGAAGCAAAAATGTCTCTGGTGATCCTCACCAATATGGTGATACTGTGACCTTCAGGACCCCTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 ENSMUST00000205854.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCACATGTAGACCCAAGGATTTAGTGTTCCTTGGCTTGGGGGTCGAAGGAACCTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTCRPKDLVFLGLGVEGTFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGT...TCCTTCGACCCCCAAGCCAAGGAACACTAAATCCTTGGGTCTACATGTGGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| 3UTR CAA 72 bp | AATGAACATCAATACCTCTGTGTGGAGTTGCTTCAATaGTGGCAAGCTAGCCACTGGGCAAGAAATGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NEHQYLCVELLQ*WQASHWARNAL Trigger: TAGGGCATTTCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTGATGTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR TCA 90 bp | GCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTCCCACTCTTCCTGAGTaGAGTTCACATGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARVTESQHVSLKSEKSILPTLPE*SSHALH Trigger: ATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGG...AAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 ENSMUST00000180544.3 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCCCACTCTTCCTGAGTaGAGTTCACATGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LARVTESQHVSLKSEKSIPTLPE*SSHALH Trigger: ATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGG...GATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 ENSMUST00000180544.3 |
||
| CDS-3UTR TCA 90 bp | CATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGCCCACTCTTCCTGAGTaGAGTTCACATGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HELARVTESQHVSLKSEKPTLPE*SSHALH Trigger: ATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGG...CTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 ENSMUST00000180544.3 ENSMUST00000205712.2 |
||
| 3UTR CAA 72 bp | CCTTCCTTCAAGGCTAGAGTTTCTCTTCATCATGAATaGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFKARVSLHHE*ARVTESQHVSL Trigger: CAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATGATGAAGAGAAACTCTAGCCTTGAAGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127117.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAAACTTTTCCCTGAGTGCCTCAATGTCATTTGTCACTTTGGTTCTCCTACCCACTCTTCCTGAGTaGAGTTCACATGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RINFSLSASMSFVTLVLLPTLPE*SSHALH Trigger: ATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGG...TAGGAGAACCAAAGTGACAAATGACATTGAGGCACTCAGGGAAAAGTTTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CAA 72 bp | AAAAAGGATAATGAACATCAATACCTCTGTGTGGAGTaGCTTCAATTGTGGCAAGCTAGCCACTGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKDNEHQYLCVE*LQLWQASHWAR Trigger: TCTTGCCCAGTGGCTAGCTTGCCACAATTGAAGCAACTCCACACAGAGGTATTGATGTTCATTATCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTTTCACTCGGAGATTTCTGTaGCATGCAAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTESQHVSLKSEKSILFTRRFL*HAKALP Trigger: TGGTAAAGCCTTTGCATGTCACAGAAATCTCCGAGT...GAAAAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| 3UTR CAA 72 bp | GCTGTTGAGACTTGCTGTATGAGACTTGAAAGAGAATaGAACAGGATAAACTTTTCCCTGAGTGCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AVETCCMRLERE*NRINFSLSASM Trigger: CATTGAGGCACTCAGGGAAAAGTTTATCCTGTTCAATTCTCTTTCAAGTCTCATACAGCAAGTCTCAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
||
| 3UTR CAA 72 bp | AAAGAGGTTCTGTACTGGCTGATTTTGTGTGTTAACTaGACACAAGTTGGAGTTACCATAGAGAAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEVLYWLILCVN*TQVGVTIEKGA Trigger: GGCTCCTTTCTCTATGGTAACTCCAACTTGTGTCAAGTTAACACACAAAATCAGCCAGTACAGAACCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGCTTCATGCTGTTCGGCTACCAAATATTTTCTGTGGCCCCAATCAATAGAGATTACTATCATGTaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LSASCCSATKYFLWPQSIEITIM*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACATGATAGTAATCTC...TATTGATTGGGGCCACAGAAAATATTTGGTAGCCGAACAGCATGAAGCAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR GCA 90 bp | TTCATGATGATGTACAAAGGCTTCACCATATTAAATACACTCACAGGGTTTCCTACGCGGAGACTACTGTaGTGTGAAAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FMMMYKGFTILNTLTGFPTRRLL*CEKALP Trigger: TGGTAAAGCCTTTTCACAGCACAGTAGTCTCCGCGT...AGGAAACCCTGTGAGTGTATTTAATATGGTGAAGCCTTTGTACATCATCATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR GCA 90 bp | CATCATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGATGACTGTTACGTaGAAAGGCTTTACCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: HHELARVTESQHVSLKSEKMTVT*KGFTTF Trigger: GAATGTGGTAAAGCCTTTGCACGTAACAGTCATCTT...TTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR GCA 90 bp | CATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGGAGATTTCTGTGACATaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HELARVTESQHVSLKSEKEISVT*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATGTCACAGAAATCTC...CTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR CCA 90 bp | GTTGAACTCATGTTTTCAGAGTTCTTTCCCACAGTCTTAAGGGGTCCTGAAGGTTCCTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VELMFSEFFPTVLRGPEGSFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGA...ACCTTCAGGACCCCTTAAGACTGTGGGAAAGAACTCTGAAAACATGAGTTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205854.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTTTTAACTATGAGACATGTCTGCTCCTGACAATATACACTTCAAAAAGGCCCACTCTTCCTGAGTaGAGTTCACATGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFNYETCLLLTIYTSKRPTLPE*SSHALH Trigger: ATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGG...CCTTTTTGAAGTGTATATTGTCAGGAGCAGACATGTCTCATAGTTAAAAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTTTCATTTGGAGGTCACTGTaGGTTACAAAAGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTESQHVSLKSEKSILFIWRSL*VTKALP Trigger: TGGTAAAGCTTTTGTAACTCACAGTGACCTCCAAAT...GAAAAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR TCA 90 bp | AGAGTTTCTCTTCATCATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCAGATTTAGAAAATGCTaGCCACAATGGTTACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLHHELARVTESQHVSRFRKC*PQWLHP Trigger: TGGATGTAACCATTGTGGTCAGCATTTTCTAAATCT...GCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATGATGAAGAGAAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205712.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATCATGCCATTTCTAATTATCATGGAGTCACTGACCTTGGCAGAGAGAACTGCTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WNHAISNYHGVTDLGRENCFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGCA...GTTCTCTCTGCCAAGGTCAGTGACTCCATGATAATTAGAAATGGCATGATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
||
| 3UTR CAA 72 bp | GTAAGGTTTCCCCATAACATTCTTGACTCACATACATaGCCCCTCTCATCAAACTTAGCAATGTTACTACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRFPHNILDSHT*PLSSNLAMLLH Trigger: ATGTAGTAACATTGCTAAGTTTGATGAGAGGGGCAATGTATGTGAGTCAAGAATGTTATGGGGAAACCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTTTCAGTTGGAAGATTACTGTGATATaGAAAGGCTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: TESQHVSLKSEKSILFSWKITVI*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATATCACAGTAATCTT...CCAACTGAAAAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR GCA 90 bp | CGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTTTTCAAGATGACTGTGATATaGAAAGGTTTTACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTESQHVSLKSEKSILFKMTVI*KGFTTL Trigger: CAATGTGGTAAAACCTTTGCATATCACAGTCATCTT...GAAAAGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCTTCCTGGAATCATGCCATTTCTAATTATCATGGAGTCACTGACCTTGTGCTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPGIMPFLIIMESLTLCFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGCA...CAAGGTCAGTGACTCCATGATAATTAGAAATGGCATGATTCCAGGAAGCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
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| CDS-3UTR CCA 90 bp | TTCATGATGATGTACAAAGGCTTCACCATATTAAATACACTCACAGGGTTTCCTGCCTTCCATGTCTTCTaGAACTTTGACAATGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FMMMYKGFTILNTLTGFPAFHVF*NFDNVL Trigger: AAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGC...AGGAAACCCTGTGAGTGTATTTAATATGGTGAAGCCTTTGTACATCATCATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| CDS-3UTR CCA 90 bp | TTCATGATGATGTACAAAGGCTTCACCATATTAAATACACTCACAGGGTTTCCTGTTCTTTTATGTACATaGAGACCACTGAGTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FMMMYKGFTILNTLTGFPVLLCT*RPLSCE Trigger: TTCACAACTCAGTGGTCTCCATGTACATAAAAGAAC...AGGAAACCCTGTGAGTGTATTTAATATGGTGAAGCCTTTGTACATCATCATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| 3UTR CAA 72 bp | AACTTTTCCCTGAGTGCCTCAATGTCATTTGTCACTTaGGTTCTCCTAAAACCATTAATTATCTTTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: NFSLSASMSFVT*VLLKPLIIFGN Trigger: ATTTCCAAAGATAATTAATGGTTTTAGGAGAACCAAAGTGACAAATGACATTGAGGCACTCAGGGAAAAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| 3UTR CAA 72 bp | GACATATACCTATCACCTATTCAGTGTGTATTCCTTTaGCAATATCTAAGTGGTAGGAGACTAAACAAATTG | + |
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Preference number: 4 (lower is better) Translates to: DIYLSPIQCVFL*QYLSGRRLNKL Trigger: CAATTTGTTTAGTCTCCTACCACTTAGATATTGCAAAAGGAATACACACTGAATAGGTGATAGGTATATGTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143264.8 |
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| CDS-3UTR CAA 90 bp | CCTCACCTCGTCGTGAACAGGAAGCAACAGGAAGGGACCAGGGAAAGTTATAGCTTCTTTCAGTTTTCTTaGAAGACTTCCCAGAGCACA | + |
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Preference number: 5 (lower is better) Translates to: PHLVVNRKQQEGTRESYSFFQFS*KTSQST Trigger: TGTGCTCTGGGAAGTCTTCAAAGAAAACTGAAAGAA...GCTATAACTTTCCCTGGTCCCTTCCTGTTGCTTCCTGTTCACGACGAGGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122927.8 |
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| CDS-3UTR CAA 90 bp | GTTGAACTCATGTTTTCAGAGTTCTTTCCCACAGTCTTAAGGGGTCCTGAAGGTATGGAGTCACTGACCTaGGCAGAGAGAACATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VELMFSEFFPTVLRGPEGMESLT*AERTFS Trigger: GGAGAATGTTCTCTCTGCCAAGGTCAGTGACTCCAT...ACCTTCAGGACCCCTTAAGACTGTGGGAAAGAACTCTGAAAACATGAGTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205854.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCTTCATGCTGTTCGGCTACCAAATATTTTCTGTGGCCCCAATCAATAAGTTATCTCATGCCTTaGAAGATGACTGTGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: LSASCCSATKYFLWPQSISYLMP*KMTVPC Trigger: GCATGGCACAGTCATCTTCAAAGGCATGAGATAACT...TATTGATTGGGGCCACAGAAAATATTTGGTAGCCGAACAGCATGAAGCAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| CDS CCA 90 bp | GAGTCACTGACCTTGGCAGAGAGAACATTCTCCTTCCATGTCTTCTaGAACTTTGACAATGTTCTTCAATATTATGGTCGTCCCAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: ESLTLAERTFSFHVF*NFDNVLQYYGRPSC Trigger: ACAACTGGGACGACCATAATATTGAAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGAGAATGTTCTCTCTGCCAAGGTCAGTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205854.2 |
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| CDS-3UTR CAA 90 bp | GGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTAATTCTTTCATGCCTTaGGGGATGACTCCAATACAC | + |
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Preference number: 5 (lower is better) Translates to: GSCNRKPACKLEVRKVNPNSFMP*GMTPIH Trigger: GTGTATTGGAGTCATCCCCAAAGGCATGAAAGAATT...AGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTTCATCATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAATTCTTTCATGCCTTaGGGGATGACTCCAATACAC | + |
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Preference number: 5 (lower is better) Translates to: VSLHHELARVTESQHVSLNSFMP*GMTPIH Trigger: GTGTATTGGAGTCATCCCCAAAGGCATGAAAGAATT...CAAGCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATGATGAAGAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180544.3 ENSMUST00000205712.2 |
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| CDS-3UTR CAA 90 bp | GGCTCGTGTAACAGAAAGCCAGCATGTAAGCTTGAAGTCAGAAAAGTCAATCCTAATTCTTTCATGCCTTaGAAGATTACTGTGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: GSCNRKPACKLEVRKVNPNSFMP*KITVMC Trigger: GCACATCACAGTAATCTTCAAAGGCATGAAAGAATT...AGGATTGACTTTTCTGACTTCAAGCTTACATGCTGGCTTTCTGTTACACGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTTCTCTTCATCATGAATTGGCTCGTGTAACAGAAAGCCAGCATGTAAGCAATTCTTTTATGCCTTaGAAGATGACTGTTACGTGC | + |
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Preference number: 5 (lower is better) Translates to: RVSLHHELARVTESQHVSNSFMP*KMTVTC Trigger: GCACGTAACAGTCATCTTCAAAGGCATAAAAGAATT...GCTTACATGCTGGCTTTCTGTTACACGAGCCAATTCATGATGAAGAGAAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180544.3 |
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| CDS TCA 72 bp | GAAAATGCTGACCTGCTTCCATGTCTTCTGGAACTTTaGCAATGTTCTTCAATATTATGGTCGTCCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: ENADLLPCLLEL*QCSSILWSSQL Trigger: CAACTGGGACGACCATAATATTGAAGAACATTGTCAAAGTTCCAGAAGACATGGAAGCAGGTCAGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
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| CDS TCA 72 bp | TCAGTTGGTAGTATTTGGGGGAGATTTAGAAAATGCTaGCCTGCTTCCATGTCTTCTGGAACTTTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: SVGSIWGRFRKC*PASMSSGTLTM Trigger: CATTGTCAAAGTTCCAGAAGACATGGAAGCAGGTCAGCATTTTCTAAATCTCCCCCAAATACTACCAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127117.8 ENSMUST00000127290.8 |
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| CDS CAA 72 bp | ATGACTTGTTTCATGCCTTCCATGTCTTCTGGAACTTaGACAATGTTCTTCAATATTATGGTCGTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: MTCFMPSMSSGT*TMFFNIMVVPV Trigger: AACTGGGACGACCATAATATTGAAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGCATGAAACAAGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180544.3 ENSMUST00000205712.2 |
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