Pregenerated sensors for ZFP948 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067931Ensembl transcript IDs: ENSMUST00000088787.7
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACAGTTGGTGGGTTCATaGAGCATTTCACCAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPQLVGS*SISPSS Trigger: TGAACTTGGTGAAATGCTTCATGAACCCACCAACTG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATGGCATTGCCCACACTaGTATCGTTTCTCTCTATTG | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPWHCPH*YRFSLL Trigger: CAATAGAGAGAAACGATACCAGTGTGGGCAATGCCA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACTGAAACTGGAACAGTaGGCAAAGAATCTGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPLKLEQ*AKNLSH Trigger: GTGTGACAGATTCTTTGCCCACTGTTCCAGTTTCAG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR TCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACCAGTATGCATTTTCTaGTGGCTTTTAAGTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPPVCIF*WLLSAD Trigger: GTCAGCACTTAAAAGCCATCAGAAAATGCATACTGG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR TCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACCAGTATGGAGTCTGTaGTCGCTTTTAAAGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPPVWSL*SLLKCE Trigger: TTCACACTTTAAAAGCGATCACAGACTCCATACTGG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR GCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAATGTATAGTGAGGTTTaGGGAGGTACTGAAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPMYSEV*GGTEAS Trigger: AGATGCTTCAGTACCTCCGCAAACCTCACTATACAT...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATGTGTAGAGCTGAAATaGCCACCATGTTTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPCVELK*PPCFSC Trigger: ACAGGAAAAACATGGTGGCCATTTCAGCTCTACACA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGTCTTTACCACAATCTaGGCCAGTATGTTTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPVFTTI*ASMFLS Trigger: GCTAAGAAACATACTGGCCCAGATTGTGGTAAAGAC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR GCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAACTTGTATTATAAGGTaGACAGTTGGTGGGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPTCIIR*TVGGFM Trigger: CATGAACCCACCAACTGTGCACCTTATAATACAAGT...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR GCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCTGATCTTGAGCAATaGTGGAAGATTTCTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPSDLEQ*WKISHS Trigger: ACTGTGAGAAATCTTCCAGCATTGCTCAAGATCAGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR GCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCCCTGTTCTTTGTTTaGACTGTTTGTTCTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPSLFFV*TVCSLI Trigger: GATCAGAGAACAAACAGTGCAAACAAAGAACAGGGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGATCTTGAGCAATGCTaGAAGATTTCTCACAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPDLEQC*KISHSL Trigger: AAGACTGTGAGAAATCTTCCAGCATTGCTCAAGATC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACTTAGATATGTGAGCTaGGTAAAGGACTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPLRYVS*VKDLSH Trigger: ATGTGACAAGTCCTTTACCCAGCTCACATATCTAAG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR TCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAATCGCTTTTAAAGTGTaGAAGCTGATGCAAGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPIAFKV*KLMQVF Trigger: AAAGACTTGCATCAGCTTTCACACTTTAAAAGCGAT...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR TCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGGTTTCTCTTTAGTATaGACTCTTTGGTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPGFSLV*TLWCVL Trigger: AAGAACACACCAAAGAGTTCATACTAAAGAGAAACC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR GCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCTCTGTTCTTTGTTTaGACTGTTTGTTCTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPSLFFV*TVCSLI Trigger: GATCAGAGAACAAACAGTGCAAACAAAGAACAGAGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAATGTTAACAGATGCTTaGACATGTTTACTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: YLCESTTYSLVICKQGTPMLTDA*TCLLEI Trigger: AATCTCCAGTAAACATGTCCAAGCATCTGTTAACAT...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 90 bp | AGAGCTGAAATGGCCACCATGTTTTTCCTGTCTCTGTTCTTTGTTTaGACTGTTTGTTCTCTGATCTTGAGCAATGCTGGAAGATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RAEMATMFFLSLFFV*TVCSLILSNAGRFL Trigger: GAGAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAGAACAGAGACAGGAAAAACATGGTGGCCATTTCAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGCAATGCTGGAAGATTaGAGACTGTGTGTAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPAMLED*RLCVEL Trigger: CAGCTCTACACACAGTCTCAAATCTTCCAGCATTGC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCCTGTCCCTGTTCTTaGTTTGCACTGTTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPSCPCS*FALFVL Trigger: GAGAACAAACAGTGCAAACAAAGAACAGGGACAGGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACACTGGGCAAAGGATTaGTCACAAAAGTTGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPHWAKD*SQKLHL Trigger: CAAGTGCAACTTTTGTGACAAATCCTTTGCCCAGTG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCCTGTCTCTGTTCTTaGTTTGCACTGTTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPSCLCS*FALFVL Trigger: GAGAACAAACAGTGCAAACAAAGAACAGAGACAGGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGTCCCTGTTCTTTGTTaGCACTGTTTGTTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPVPVLC*HCLFSD Trigger: ATCAGAGAACAAACAGTGCAAACAAAGAACAGGGAC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAAGCTGGGTAAAGGACTaGTCACATTCTACACATTTG | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPSWVKD*SHSTHL Trigger: CAAATGTGTAGAATGTGACAAGTCCTTTACCCAGCT...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACCCGTTGTAAAGGACTaGTCACATACTGTACAATTG | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPPVVKD*SHTVQL Trigger: CAATTGTACAGTATGTGACAAGTCCTTTACAACGGG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 90 bp | TCTGTAGTTGTTAGAGGTTTCTGTAGTGTCACTTGTATTATAAGGTaGACAGTTGGTGGGTTCATGAAGCATTTCACCAAGTTCATTACA | + |
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Preference number: 5 (lower is better) Translates to: SVVVRGFCSVTCIIR*TVGGFMKHFTKFIT Trigger: TGTAATGAACTTGGTGAAATGCTTCATGAACCCACCAACTGTGCACCTTATAATACAAGTGACACTACAGAAACCTCTAACAACTACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 90 bp | GTCTCTGTTCTTTGTTTGCACTGTTTGTTCTCTGATCTTGAGCAATaGTGGAAGATTTCTCACAGTCTTTATATTCACAACGTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VSVLCLHCLFSDLEQ*WKISHSLYIHNVLL Trigger: GAGAAGAACGTTGTGAATATAAAGACTGTGAGAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAGAACAGAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGTTTGTTCTCTGATCTaGAGCAATGCTGGAAGATTT | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPVCSLI*SNAGRF Trigger: AAATCTTCCAGCATTGCTCAAGATCAGAGAACAAAC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCACTTTGTTTGCACTGTTaGTTCTCTGATCTTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPLCLHC*FSDLEQ Trigger: TTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAG...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCAGTCTCTGTTCTTTGTTaGCACTGTTTGTTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPVSVLC*HCLFSD Trigger: ATCAGAGAACAAACAGTGCAAACAAAGAACAGAGAC...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCTATTGAAGATTGCTaGTTGCATGAGACTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPSIEDC*LHETVC Trigger: ACACACAGTCTCATGCAACAAGCAATCTTCAATAGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATCCAGTATGAAGACGTaGGTGTGTTTTAAGAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPSSMKT*VCFKSC Trigger: ACAACTCTTAAAACACACCAACGTCTTCATACTGGA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTGAGTCTACTACTTATTCCCTTGTGATTTGTAAGCAGGGAACACCATATCGTTTCTCTCTATaGAAGATTGCTTGTTGCATG | + |
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Preference number: 5 (lower is better) Translates to: YLCESTTYSLVICKQGTPYRFSL*KIACCM Trigger: CATGCAACAAGCAATCTTCAATAGAGAGAAACGATA...TGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAAAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 72 bp | GTGAGGTTTGCGGAGGTACTGAAGCATCTCTGGCATTaGCCACACTGGTATCGTTTCTCTCTATTGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: VRFAEVLKHLWH*PHWYRFSLLKI Trigger: AATCTTCAATAGAGAGAAACGATACCAGTGTGGGCAATGCCAGAGATGCTTCAGTACCTCCGCAAACCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CAA 90 bp | CTGAAGCATCTCTGGCATTGCCCACACTGGTATCGTTTCTCTCTATaGAAGATTGCTTGTTGCATGAGACTGTGTGTAGAGCTGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: LKHLWHCPHWYRFSL*KIACCMRLCVELKW Trigger: CCATTTCAGCTCTACACACAGTCTCATGCAACAAGCAATCTTCAATAGAGAGAAACGATACCAGTGTGGGCAATGCCAGAGATGCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS TCA 72 bp | TTCTCCAGTGTGCACGCTTTTAAGTCTATCTGGGTTTaGAGAGTCAACAGAGGCATCCTGGTCATTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSSVHAFKSIWV*RVNRGILVITA Trigger: TGCTGTAATGACCAGGATGCCTCTGTTGACTCTTCAAACCCAGATAGACTTAAAAGCGTGCACACTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CAA 72 bp | CCCACACTGGTATCGTTTCTCTCTATTGAAGATTGCTaGTTGCATGAGACTGTGTGTAGAGCTGAAATGGCC | + |
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Preference number: 6 (lower is better) Translates to: PTLVSFLSIEDC*LHETVCRAEMA Trigger: GGCCATTTCAGCTCTACACACAGTCTCATGCAACAAGCAATCTTCAATAGAGAGAAACGATACCAGTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CAA 72 bp | CTCTGGCATTGCCCACACTGGTATCGTTTCTCTCTATaGAAGATTGCTTGTTGCATGAGACTGTGTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LWHCPHWYRFSL*KIACCMRLCVE Trigger: CTCTACACACAGTCTCATGCAACAAGCAATCTTCAATAGAGAGAAACGATACCAGTGTGGGCAATGCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 72 bp | TTGCCCACACTGGTATCGTTTCTCTCTATTGAAGATTaGTTGTTGCATGAGACTGTGTGTAGAGCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: LPTLVSFLSIED*LLHETVCRAEM Trigger: CATTTCAGCTCTACACACAGTCTCATGCAACAAGCAATCTTCAATAGAGAGAAACGATACCAGTGTGGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 72 bp | GTTAGAGGTTTCTGTAGTGTCACTTGTATTATAAGGTaGACAGTTGGTGGGTTCATGAAGCATTTCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: VRGFCSVTCIIR*TVGGFMKHFTK Trigger: CTTGGTGAAATGCTTCATGAACCCACCAACTGTGCACCTTATAATACAAGTGACACTACAGAAACCTCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CAA 72 bp | TCCCTGTTCTTTGTTTGCACTGTTTGTTCTCTGATCTaGAGCAATGCTGGAAGATTTGAGACTGTGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SLFFVCTVCSLI*SNAGRFETVCR Trigger: TCTACACACAGTCTCAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAGAACAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CAA 90 bp | TTTTTCCTGTCCCTGTTCTTTGTTTGCACTGTTTGTTCTCTGATCTaGAGCAATGCTGGAAGATTTGAGACTGTGTGTAGAGCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: FFLSLFFVCTVCSLI*SNAGRFETVCRAEM Trigger: CATTTCAGCTCTACACACAGTCTCAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAGAACAGGGACAGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS GCA 72 bp | CTTTGTTTGCACTGTTTGTTCTCTGATCTTGAGCAATaGTGGAAGATTTCTCACAGTCTTTATATTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: LCLHCLFSDLEQ*WKISHSLYIHN Trigger: GTTGTGAATATAAAGACTGTGAGAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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| CDS CCA 72 bp | TGTTTGCACTGTTTGTTCTCTGATCTTGAGCAATGCTaGAAGATTTCTCACAGTCTTTATATTCACAACGTT | + |
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Preference number: 6 (lower is better) Translates to: CLHCLFSDLEQC*KISHSLYIHNV Trigger: AACGTTGTGAATATAAAGACTGTGAGAAATCTTCCAGCATTGCTCAAGATCAGAGAACAAACAGTGCAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088787.7 |
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