Pregenerated sensors for ZFP947 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063383Ensembl transcript IDs: ENSMUST00000080249.6
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTTTCTTCTCTGATAAGAGCTaGGATTGTTTTTGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SFKCCQQYCWNKAHAIVFFSDKS*DCFWLK Trigger: CTTCAGCCAAAAACAATCTCAGCTCTTATCAGAGAA...GAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTTTCGAGATTGTTTTTGGCTaGAGCATTTGTCACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: SFKCCQQYCWNKAHAIVFEIVFG*SICHIH Trigger: ATGAATGTGACAAATGCTTCAGCCAAAAACAATCTC...GAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR CCA 72 bp | CTAGCGTGGAGCTTCAAGTGTTGCCAACAATACTGCTaGAATAAAGCACATGCCATAGTTTTCCAGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: LAWSFKCCQQYC*NKAHAIVFQWT Trigger: TGTCCACTGGAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCACGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR-3UTR CAA 90 bp | ATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTGGCTCAGTTTGGTGGAGCTTCAAGTGTaGCCAACAATACTGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ICRHLNRISSILYMWLSLVELQV*PTILLE Trigger: TTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCAC...CAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCTACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR TCA 72 bp | AGTTACATACAGCACTTAGGGGAAGCAGTTAGTAAATaGGAGCACAAGGGACTGAAAGACAATTGCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: SYIQHLGEAVSK*EHKGLKDNCYP Trigger: AGGATAGCAATTGTCTTTCAGTCCCTTGTGCTCTCATTTACTAACTGCTTCCCCTAAGTGCTGTATGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGTATTTTCTTAGGTCTGAGATTTGGGTAAAGACCTTTCCTCATATATCAGAGCTGAGATTGTTTTaGGCTGAAGCATTTGTCACA | + |
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Preference number: 3 (lower is better) Translates to: TRYFLRSEIWVKTFPHISELRLF*AEAFVT Trigger: TGTGACAAATGCTTCAGCCAAAAACAATCTCAGCTC...TGATATATGAGGAAAGGTCTTTACCCAAATCTCAGACCTAAGAAAATACCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| 3UTR CCA 72 bp | AGGCATCTGAACAGGATAAGCAGCATCTTATATATGTaGCTCAGTTTGTCAAATCTTCTTTTAAGAAGTATA | + |
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Preference number: 3 (lower is better) Translates to: RHLNRISSILYM*LSLSNLLLRSI Trigger: TATACTTCTTAAAAGAAGATTTGACAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR GCA 90 bp | TATATAATATTCTCTAGCGTGGAGCTTCAAGTGTTGCCAACAATACTGCTGGAACACATCCATGTACAATaGCCTCTGAGCACAGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: YIIFSSVELQVLPTILLEHIHVQ*PLSTVK Trigger: CTTGACTGTGCTCAGAGGGCATTGTACATGGATGTG...TTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCACGCTAGAGAATATTATATA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR TCA 90 bp | AGCTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTTTCATATGCTGTAGGTCTTaGTCCAACATGTTCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SFKCCQQYCWNKAHAIVFICCRS*SNMFSN Trigger: ATTTGAGAACATGTTGGATCAAGACCTACAGCATAT...GAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR GCA 90 bp | ATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTGGCTCAGTTTGATTTGTAAGGTTCTTTaGCTGAATGACGCATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: ICRHLNRISSILYMWLSLICKVL*LNDASD Trigger: ATCAGATGCGTCATTCAGGCAAAGAACCTTACAAAT...CAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCTACAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR TCA 90 bp | TATATAATATTCTCTAGCGTGGAGCTTCAAGTGTTGCCAACAATACTGCTGGAAGATCACCAACTTGAATaGAACATTTCTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: YIIFSSVELQVLPTILLEDHQLE*NISHIH Trigger: GTGAATGTGAGAAATGTTTCATTCAAGTTGGTGATC...TTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCACGCTAGAGAATATTATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR GCA 90 bp | ATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTGGCTCAGTTTGACTTGGATATTTGCATaGTTGTGGATAATATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ICRHLNRISSILYMWLSLTWIFA*LWIICC Trigger: ACAGCATATTATCCACAAGCATGCAAATATCCAAGT...CAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCTACAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CCA 90 bp | TATATAATATTCTCTAGCGTGGAGCTTCAAGTGTTGCCAACAATACTGCTGGAACTAAGACTGCCTTTCTaGGTAAAGGATTTATCACAT | + |
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Preference number: 4 (lower is better) Translates to: YIIFSSVELQVLPTILLELRLPF*VKDLSH Trigger: ATGTGATAAATCCTTTACCCAGAAAGGCAGTCTTAG...TTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCACGCTAGAGAATATTATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CCA 90 bp | ATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTGGCTCAGTTTGTCTGGGCAAAACATTTaGTACATTCACTACATTTGT | + |
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Preference number: 4 (lower is better) Translates to: ICRHLNRISSILYMWLSLSGQNI*YIHYIC Trigger: ACAAATGTAGTGAATGTACCAAATGTTTTGCCCAGA...CAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCTACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CCA 90 bp | TATATAATATTCTCTAGCGTGGAGCTTCAAGTGTTGCCAACAATACTGCTGGAACTAAGACTGCCTTTGTaGGAAAAGTATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YIIFSSVELQVLPTILLELRLPL*EKYLSH Trigger: ATGTGACAAATACTTTTCCCACAAAGGCAGTCTTAG...TTCCAGCAGTATTGTTGGCAACACTTGAAGCTCCACGCTAGAGAATATTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGTATTTTCTTAGGTCTGAGATTTGGGTAAAGACCTTTCCTCATATATCAATATTTGCATGCTTGTaGATAATATGCTGTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TRYFLRSEIWVKTFPHISIFACL*IICCRS Trigger: AGACCTACAGCATATTATCCACAAGCATGCAAATAT...TGATATATGAGGAAAGGTCTTTACCCAAATCTCAGACCTAAGAAAATACCTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CAA 90 bp | AGCTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTTTCGGTGTCTTTCCACTTTaGGTTTGTTTCAACATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SFKCCQQYCWNKAHAIVFGVFPL*VCFNMR Trigger: CCTCATGTTGAAACAAACCAAAAGTGGAAAGACACC...GAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CAA 90 bp | ATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTGGCTCAGTTTGCTTTCCACTTTTGGTTaGTTTCAACATGAGGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ICRHLNRISSILYMWLSLLSTFG*FQHEGF Trigger: GAAACCCTCATGTTGAAACAAACCAAAAGTGGAAAG...CAAACTGAGCCACATATATAAGATGCTGCTTATCCTGTTCAGATGCCTACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CAA 90 bp | AGCTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTTTCTTCTGGGCAAAACATTaGGTACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: SFKCCQQYCWNKAHAIVFFWAKH*VHSLHL Trigger: CAAATGTAGTGAATGTACCAAATGTTTTGCCCAGAA...GAAAACTATGGCATGTGCTTTATTCCAGCAGTATTGTTGGCAACACTTGAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS-3UTR CAA 90 bp | ACCAGGTATTTTCTTAGGTCTGAGATTTGGGTAAAGACCTTTCCTCATATATCAATACTAAGACTGCCTTaGTGGGAAAAGTATTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: TRYFLRSEIWVKTFPHISILRLP*WEKYLS Trigger: TGACAAATACTTTTCCCACAAAGGCAGTCTTAGTAT...TGATATATGAGGAAAGGTCTTTACCCAAATCTCAGACCTAAGAAAATACCTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS TCA 72 bp | ATATTTGCATGCTTGTGGATAATATGCTGTAGGTCTTaGTCCAACATGTTCTCAAATTTAGGACACATGCAA | + |
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Preference number: 6 (lower is better) Translates to: IFACLWIICCRS*SNMFSNLGHMQ Trigger: TTGCATGTGTCCTAAATTTGAGAACATGTTGGATCAAGACCTACAGCATATTATCCACAAGCATGCAAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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| CDS TCA 72 bp | GCACTATTGTATTCTTTCCTTCCTATCTTGATTCCTTaGTTTCGACTAATGGTAGAGCACAAATTGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: ALLYSFLPILIP*FRLMVEHKLKQ Trigger: CTGTTTCAATTTGTGCTCTACCATTAGTCGAAATCAAGGAATCAAGATAGGAAGGAAAGAATACAATAGTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080249.6 |
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