Pregenerated sensors for ZFP946 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071266Ensembl transcript IDs: ENSMUST00000088763.13, ENSMUST00000120222.8, ENSMUST00000167740.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAACAGCACAAGGGACACAAAGACAGTTAGCTATGCAGAAATTTaGAACCAGAATATGATACAGATCATGAATACTAGACACTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: DNSTRDTKTVSYAEI*NQNMIQIMNTRHWE Trigger: CTCCCAGTGTCTAGTATTCATGATCTGTATCATATTCTGGTTTCAAATTTCTGCATAGCTAACTGTCTTTGTGTCCCTTGTGCTGTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR CCA 90 bp | CTGCATATCTGTAGGTATATCAACAGGATAAAGACCATATTATGTTaGTGGCTCAGTTGGTCCTATCTATCCTCTTTTAAGAAGTATAAT | + |
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Preference number: 1 (lower is better) Translates to: LHICRYINRIKTILC*WLSWSYLSSFKKYN Trigger: ATTATACTTCTTAAAAGAGGATAGATAGGACCAACTGAGCCACCAACATAATATGGTCTTTATCCTGTTGATATACCTACAGATATGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATGAAGAATTCTATGAGATaGGCCAACAGTAAAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: EEFLPHPRYKFPDILLHMKNSMR*ANSKVS Trigger: AGACACTTTACTGTTGGCTCATCTCATAGAATTCTT...CATATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTTCATAATAATTTTCTAGTATGGAGCCTCAAGTGCCATGGAAAATACCACAAGAATTCTATGAGATaGGCCAACAGTAAAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HVHNNFLVWSLKCHGKYHKNSMR*ANSKVS Trigger: AGACACTTTACTGTTGGCTCATCTCATAGAATTCTT...GTGGTATTTTCCATGGCACTTGAGGCTCCATACTAGAAAATTATTATGAACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR GCA 72 bp | CATGTTCATAATAATTTTCTAGTATGGAGCCTCAAGTaGCATGGAAAATACCACCTGGATAAAGTACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HVHNNFLVWSLK*HGKYHLDKVHA Trigger: AGCATGTACTTTATCCAGGTGGTATTTTCCATGGCACTTGAGGCTCCATACTAGAAAATTATTATGAACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR CCA 72 bp | TGGTTTCAAAGCACTGTTACACAATACCACATCTTCTaGCTTTCTCACTTTGTCTCCATCATGAAATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: WFQSTVTQYHIF*LSHFVSIMKYL Trigger: CAAATATTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR CCA 72 bp | TGTAGGTATATCAACAGGATAAAGACCATATTATGTTaGTGGCTCAGTTGGTCCTATCTATCCTCTTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CRYINRIKTILC*WLSWSYLSSFK Trigger: CTTAAAAGAGGATAGATAGGACCAACTGAGCCACCAACATAATATGGTCTTTATCCTGTTGATATACCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR TCA 72 bp | CTCTCCTGTATATATTCTCTGAAGAATTCTATGAGATaGGCCAACAGTAAAGTGTCTGCATATTTACTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LSCIYSLKNSMR*ANSKVSAYLLH Trigger: ATGTAGTAAATATGCAGACACTTTACTGTTGGCTCATCTCATAGAATTCTTCAGAGAATATATACAGGAGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR TCA 72 bp | ACAAGGGACACAAAGACAGTTAGCTATGCAGAAATTTaGAACCAGAATATGATACAGATCATGAATACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRDTKTVSYAEI*NQNMIQIMNTR Trigger: TCTAGTATTCATGATCTGTATCATATTCTGGTTTCAAATTTCTGCATAGCTAACTGTCTTTGTGTCCCTTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATGGTGGACAATTTGCTGTaGGTCTTCATCCAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: EEFLPHPRYKFPDILLHMVDNLL*VFIQDI Trigger: AATGTCTTGGATGAAGACGCACAGCAAATTGTCCAC...CATATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATTTTGGGTGGATGCATaGGTGATTTTAGCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSSSPTPAINFQIYCYIFWVDA*VILASS Trigger: TGAGCTTGCTAAAATCACCCATGCATCCACCCAAAA...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATGTCTTGGATATTCAAATaGTGGTGGACAATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEFLPHPRYKFPDILLHMSWIFK*WWTICC Trigger: ACAGCAAATTGTCCACCAGCATTTGAATATCCAAGA...CATATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATACTAAGGCTGCATTTGTaGATAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSSSPTPAINFQIYCYILRLHL*IKHLSH Trigger: ATGTGACAAATGCTTTATGCACAAATGCAGCCTTAG...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAAACTATTTTGGGTGGATaGATGGGTGATTTTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKTILGG*MGDFSK Trigger: CTTGCTAAAATCACCCATGCATCCACCCAAAATAGT...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAACTTTCCACTATTGGTTaGTTTCAGCATGCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKLSTIG*FQHAFF Trigger: GAAAAACGCATGCTGAAACCAACCAATAGTGGAAAG...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATGATAAGTTGGCCTTTCTaGGTAAAAGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EEFLPHPRYKFPDILLHMISWPF*VKDLSH Trigger: ATGTGACAAATCTTTTACCCAGAAAGGCCAACTTAT...CATATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGGTGGACAATTTGCTGTaGGTCTTCATCCAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWVDNLL*VFIQDI Trigger: AATGTCTTGGATGAAGACGCACAGCAAATTGTCCAC...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAATCTTGGATATTCAAATaGTGGTGGACAATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKSWIFK*WWTICC Trigger: ACAGCAAATTGTCCACCAGCATTTGAATATCCAAGA...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAACTAAGGCTGCATTTGTaGATAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKLRLHL*IKHLSH Trigger: ATGTGACAAATGCTTTATGCACAAATGCAGCCTTAG...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGTTTTGGGTGGATGCATaGGTGATTTTAGCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWFWVDA*VILASS Trigger: TGAGCTTGCTAAAATCACCCATGCATCCACCCAAAA...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | CATGTTCATAATAATTTTCTAGTATGGAGCCTCAAGTGCCATGGAAAATACCACGTTTCTTTCCACTATTaGTTGGTTTCAGCATGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HVHNNFLVWSLKCHGKYHVSFHY*LVSACV Trigger: AACGCATGCTGAAACCAACCAATAGTGGAAAGAAAC...GTGGTATTTTCCATGGCACTTGAGGCTCCATACTAGAAAATTATTATGAACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGGTTTCTTTCCACTATTaGTTGGTTTCAGCATGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWVSFHY*LVSACV Trigger: AACGCATGCTGAAACCAACCAATAGTGGAAAGAAAC...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | CATGTTCATAATAATTTTCTAGTATGGAGCCTCAAGTGCCATGGAAAATACCACATCTTAACAGATCCTTaGAAACATTTAGCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVHNNFLVWSLKCHGKYHILTDP*KHLAEK Trigger: CTTCTCTGCTAAATGTTTCCAAGGATCTGTTAAGAT...GTGGTATTTTCCATGGCACTTGAGGCTCCATACTAGAAAATTATTATGAACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGTTAAGACTGCCTTTGTaGGTAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWLRLPL*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACAAAGGCAGTCTTAA...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTCTCTACTATATGTCTTCTCTACTAAGTTCTAAGATGGTCTATCTTGGTTTAAGACTGCCTTTGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: MSLYYMSSLLSSKMVYLGLRLPL*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACAAAGGCAGTCTTAA...ACCAAGATAGACCATCTTAGAACTTAGTAGAGAAGACATATAGTAGAGAGACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| 3UTR CAA 72 bp | TTTATTGTAGTTACATACAGGAATATGAGCAAGAAGTaGTTGACAACAGCACAAGGGACACAAAGACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: FIVVTYRNMSKK*LTTAQGTQRQL Trigger: TAACTGTCTTTGTGTCCCTTGTGCTGTTGTCAACAACTTCTTGCTCATATTCCTGTATGTAACTACAATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGATCTTAACAGATCCTTaGAAACATTTAGCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWILTDP*KHLAEK Trigger: CTTCTCTGCTAAATGTTTCCAAGGATCTGTTAAGAT...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CCA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGATAAGTTGGCCTTTCTaGGTAAAAGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SIELFWFQSTVTQYHIFWISWPF*VKDLSH Trigger: ATGTGACAAATCTTTTACCCAGAAAGGCCAACTTAT...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATAGGTTTCTTTCCACTATaGGTTGGTTTCAGCATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VKSSSPTPAINFQIYCYIGFFPL*VGFSMR Trigger: ACGCATGCTGAAACCAACCAATAGTGGAAAGAAACC...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAATCCACAGCCACGTCCTaGAATCTTAACAGATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKSTATS*NLNRSL Trigger: CAAGGATCTGTTAAGATTCAAGGACGTGGCTGTGGA...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATTTATAAGGACTATTTaGGGTGGATGCATGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VKSSSPTPAINFQIYCYIFIRTI*GGCMGD Trigger: ATCACCCATGCATCCACCCAAAATAGTCCTTATAAA...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATATTGAGGGCAAAACAGTaGTCATGTTCACTACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VKSSSPTPAINFQIYCYILRAKQ*SCSLLL Trigger: CAAAAGTAGTGAACATGACAACTGTTTTGCCCTCAA...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGTTCCTCCCCCACCCCCGCTATAAATTTCCAGATATATTGTTACATACTGATGAATTATAAGTaGGCCTTTCTGGGTAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: VKSSSPTPAINFQIYCYILMNYK*AFLGKR Trigger: TCTTTTACCCAGAAAGGCCAACTTATAATTCATCAG...TATGTAACAATATATCTGGAAATTTATAGCGGGGGTGGGGGAGGAACTCTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGGGTTTCTTTCCACTATaGGTTGGTTTCAGCATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SIELFWFQSTVTQYHIFWGFFPL*VGFSMR Trigger: ACGCATGCTGAAACCAACCAATAGTGGAAAGAAACC...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAACTGATGAATTATAAGTaGGCCTTTCTGGGTAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKLMNYK*AFLGKR Trigger: TCTTTTACCCAGAAAGGCCAACTTATAATTCATCAG...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | ACTGTTACACAATACCACATCTTCTGGCTTTCTCACTTTGTCTCCATCATGAAATTGAGGGTAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: TVTQYHIFWLSHFVSIMKLRVKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTACCCTCAA...TTTCATGATGGAGACAAAGTGAGAAAGCCAGAAGATGTGGTATTGTGTAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGTTTATAAGGACTATTTaGGGTGGATGCATGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SIELFWFQSTVTQYHIFWFIRTI*GGCMGD Trigger: ATCACCCATGCATCCACCCAAAATAGTCCTTATAAA...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGTTGAGGGCAAAACAGTaGTCATGTTCACTACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIELFWFQSTVTQYHIFWLRAKQ*SCSLLL Trigger: CAAAAGTAGTGAACATGACAACTGTTTTGCCCTCAA...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | CATGTTCATAATAATTTTCTAGTATGGAGCCTCAAGTGCCATGGAAAATACCACTTGAGGGTAAAGCATTaGTCACATTCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: HVHNNFLVWSLKCHGKYHLRVKH*SHSLHL Trigger: CAAATGTAGTGAATGTGACAAATGCTTTACCCTCAA...GTGGTATTTTCCATGGCACTTGAGGCTCCATACTAGAAAATTATTATGAACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | ATGTCTCTCTACTATATGTCTTCTCTACTAAGTTCTAAGATGGTCTATCTTGGTTTGTGGGTAAAGCATTaGTCACATTCACTACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: MSLYYMSSLLSSKMVYLGLWVKH*SHSLHW Trigger: CCAATGTAGTGAATGTGACAAATGCTTTACCCACAA...ACCAAGATAGACCATCTTAGAACTTAGTAGAGAAGACATATAGTAGAGAGACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS-3UTR CAA 90 bp | TCCATTGAATTATTTTGGTTTCAAAGCACTGTTACACAATACCACATCTTCTGGTTGTGGGTAAAGCATTaGTCACATTCACTACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIELFWFQSTVTQYHIFWLWVKH*SHSLHW Trigger: CCAATGTAGTGAATGTGACAAATGCTTTACCCACAA...CCAGAAGATGTGGTATTGTGTAACAGTGCTTTGAAACCAAAATAATTCAATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 |
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| CDS CAA 90 bp | TGCATGGGTGATTTTAGCAAGCTCATGGCATTTATAAGACTTCTCTaGGATATTCAAATGCTGGTGGACAATTTGCTGTGCGTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CMGDFSKLMAFIRLL*DIQMLVDNLLCVFI Trigger: GATGAAGACGCACAGCAAATTGTCCACCAGCATTTGAATATCCAAGAGAAGTCTTATAAATGCCATGAGCTTGCTAAAATCACCCATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 ENSMUST00000167740.2 |
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| CDS GCA 72 bp | GACTTCTCTTGGATATTCAAATGCTGGTGGACAATTTaGTGTGCGTCTTCATCCAAGACATTCTTATATTTG | + |
|
Preference number: 6 (lower is better) Translates to: DFSWIFKCWWTI*CASSSKTFLYL Trigger: CAAATATAAGAATGTCTTGGATGAAGACGCACAGCAAATTGTCCACCAGCATTTGAATATCCAAGAGAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 ENSMUST00000167740.2 |
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| CDS GCA 72 bp | CTCTTGGATATTCAAATGCTGGTGGACAATTTGCTGTaGGTCTTCATCCAAGACATTCTTATATTTGTAACA | + |
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Preference number: 6 (lower is better) Translates to: LLDIQMLVDNLL*VFIQDILIFVT Trigger: TGTTACAAATATAAGAATGTCTTGGATGAAGACGCACAGCAAATTGTCCACCAGCATTTGAATATCCAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 ENSMUST00000167740.2 |
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| CDS CAA 72 bp | AGTTGTATCTCTGAGGTTAATTTTATAAGGACTATTTaGGGTGGATGCATGGGTGATTTTAGCAAGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: SCISEVNFIRTI*GGCMGDFSKLM Trigger: CATGAGCTTGCTAAAATCACCCATGCATCCACCCAAAATAGTCCTTATAAAATTAACCTCAGAGATACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088763.13 ENSMUST00000120222.8 ENSMUST00000167740.2 |
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