Pregenerated sensors for ZFP945 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059142Ensembl transcript IDs: ENSMUST00000088696.13, ENSMUST00000160457.10
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCCCAAGGTGGGTTGGTCACTTTATGACCTATCCTTCAGTCTCTaGTCCATGTTTTTGCCTGCATTTCCTTTAAACAAGAACAATTAT | + |
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Preference number: 1 (lower is better) Translates to: GPKVGWSLYDLSFSL*SMFLPAFPLNKNNY Trigger: ATAATTGTTCTTGTTTAAAGGAAATGCAGGCAAAAACATGGAGCAGAGACTGAAGGATAGGTCATAAAGTGACCAACCCACCTTGGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
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| 3UTR CCA 90 bp | TCTATGTATCAATGTTTTACAACATGTATGCATGTAGCTTGCTTGTaGCTGGTAGGTGCTGAGGCCAGAAAGCACCTGATCTACTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SMYQCFTTCMHVACL*LVGAEARKHLIYCN Trigger: ATTACAGTAGATCAGGTGCTTTCTGGCCTCAGCACCTACCAGCCACAAGCAAGCTACATGCATACATGTTGTAAAACATTGATACATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR CCA 90 bp | AGTATACATTCCAGGTCTCTGGTCTGTTTCATTCAGCCCAAGCTATaGGAAAGTGACTTTTTCAAAACATCTAGGATTTCTAACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: SIHSRSLVCFIQPKL*ESDFFKTSRISNTV Trigger: CACTGTGTTAGAAATCCTAGATGTTTTGAAAAAGTCACTTTCCCATAGCTTGGGCTGAATGAAACAGACCAGAGACCTGGAATGTATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR TCA 90 bp | AGGCTCGATACAGAGTGCAGCATGCTATTTGCATTCACACAAACATaGCTACTGCAATTCTTCAATATCAAATCTATGTACAAAGCACAG | + |
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Preference number: 1 (lower is better) Translates to: RLDTECSMLFAFTQT*LLQFFNIKSMYKAQ Trigger: CTGTGCTTTGTACATAGATTTGATATTGAAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTATCGAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR GCA 90 bp | ACTGACTTCTTTACTAAATTCCTTGCTGCTAAAATAGGAGTTAATTaGCACAAGTCAATAGCTTTTGGCCACACAAGAGAGTGTAACTCA | + |
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Preference number: 1 (lower is better) Translates to: TDFFTKFLAAKIGVN*HKSIAFGHTRECNS Trigger: TGAGTTACACTCTCTTGTGTGGCCAAAAGCTATTGACTTGTGGCAATTAACTCCTATTTTAGCAGCAAGGAATTTAGTAAAGAAGTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
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| 3UTR CCA 90 bp | TGGTATCATTTATTCATTTTAAGTTCAGTATACATTCCAGGTCTCTaGTCTGTTTCATTCAGCCCAAGCTATGGGAAAGTGACTTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: WYHLFILSSVYIPGL*SVSFSPSYGKVTFS Trigger: TGAAAAAGTCACTTTCCCATAGCTTGGGCTGAATGAAACAGACCAGAGACCTGGAATGTATACTGAACTTAAAATGAATAAATGATACCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR CCA 90 bp | ATTTTGAGGTATGTATTTGCTGTCTTAATCACAATCCCTTCAGAATaGGTCATTTCAGTCTGCAGAAAACTGTTACACAATATCACATTC | + |
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Preference number: 1 (lower is better) Translates to: ILRYVFAVLITIPSE*VISVCRKLLHNITF Trigger: GAATGTGATATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGATTAAGACAGCAAATACATACCTCAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAGGCAGAGTCCAGGCTTaGTCTACATTGGGTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SATVLVVGNVLMSSSRKSGRVQA*STLGVL Trigger: CAGAACACCCAATGTAGACCAAGCCTGGACTCTGCC...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTGGCAGAGTCCAGGCTTaGTCTACATTGGGTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPGRVQA*STLGVL Trigger: CAGAACACCCAATGTAGACCAAGCCTGGACTCTGCC...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTTGGAGCTTTTCTTTATCTCAGCAACAAAGGTTTTTGAGAGCCTCTTTTCCACTGTGCTGGTGGTaGGAAATGTACTCATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RGWSFSLSQQQRFLRASFPLCWW*EMYSCP Trigger: AGGACATGAGTACATTTCCCACCACCAGCACAGTGG...AAAAGAGGCTCTCAAAAACCTTTGTTGCTGAGATAAAGAAAAGCTCCAACCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAGCAAAGCTGAAAGACTaGCTAAAAGTCAAACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SATVLVVGNVLMSSSRKSAKLKD*LKVKQS Trigger: ACTTTGTTTGACTTTTAGTCAGTCTTTCAGCTTTGC...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCCTACATTGGGTGTTCTaGCACAGACAGGGTAGCACA | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCLHWVF*HRQGST Trigger: TGTGCTACCCTGTCTGTGTCAGAACACCCAATGTAG...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAGCATTCACACAAACATaGCTACTGCAATTCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: SATVLVVGNVLMSSSRKSAFTQT*LLQFFN Trigger: ATTGAAGAATTGCAGTAGTCATGTTTGTGTGAATGC...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTTGTATGCATGTAGCTTaGTTGTGGCTGGTAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: AHLGHVHSQTNYIFPYYACMHVA*LWLVGA Trigger: AGCACCTACCAGCCACAAGCAAGCTACATGCATACA...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTGTCAGCCACTGTGCTaGTGGTGGGAAATGTACTCA | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCCQPLC*WWEMYS Trigger: TGAGTACATTTCCCACCACCAGCACAGTGGCTGACA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTAAGACAGTTTTCCTGTaGAGGGATTTGCTATATTCC | + |
|
Preference number: 2 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPKTVFL*RDLLYS Trigger: GGAATATAGCAAATCCCTTCACAGGAAAACTGTCTT...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCCCAAAGGACCAATGTaGAGAATTGAAAATACCATG | + |
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Preference number: 2 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPPKGPM*RIENTM Trigger: CATGGTATTTTCAATTCTTCACATTGGTCCTTTGGG...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTGTATGCATGTAGCTTaGTTGTGGCTGGTAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCCMHVA*LWLVGA Trigger: AGCACCTACCAGCCACAAGCAAGCTACATGCATACA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCACTAAGACAGCCTTTCTaGGTAAAAGATTTATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SATVLVVGNVLMSSSRKSLRQPF*VKDLSD Trigger: ATCTGATAAATCTTTTACCCAGAAAGGCTGTCTTAG...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAATGGAGCAGAATAATTaGGATGACTATTTTACACTC | + |
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Preference number: 2 (lower is better) Translates to: SATVLVVGNVLMSSSRKSMEQNN*DDYFTL Trigger: GAGTGTAAAATAGTCATCCCAATTATTCTGCTCCAT...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTTGGAGCTTTTCTTTATCTCAGCAACAAAGGTTTTTGAGAGCCTCTTTTTACATTCCAGGTCTCTaGTCTGTTTCATTCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RGWSFSLSQQQRFLRASFYIPGL*SVSFSP Trigger: TGGGCTGAATGAAACAGACCAGAGACCTGGAATGTA...AAAAGAGGCTCTCAAAAACCTTTGTTGCTGAGATAAAGAAAAGCTCCAACCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTGACAGGGTAGCACACTaGAATATATACCCAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: AHLGHVHSQTNYIFPYYADRVAH*NIYPAK Trigger: TTTTGCTGGGTATATATTTCAGTGTGCTACCCTGTC...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTTAGGTAGCATAACTTaGTCTCCACCACTCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCLGSIT*SPPLLL Trigger: GAGTAGGAGTGGTGGAGATCAAGTTATGCTACCTAA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTAATATCACATTCTTCTaGCTTCTCCATTTTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPNITFF*LLHFVL Trigger: GAGGACAAAATGGAGAAGCCAGAAGAATGTGATATT...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTACATTCCAGGTCTCTaGTCTGTTTCATTCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCYIPGL*SVSFSP Trigger: TGGGCTGAATGAAACAGACCAGAGACCTGGAATGTA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTTCAAATTCTGTACAGTaGTTTAATTCTAGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVSNSVQ*FNSSIQ Trigger: CTGGATGCTAGAATTAAAGCACTGTACAGAATTTGA...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR CAA 90 bp | TTAAGCAGACAATGCTGTCACTTTCAGGGATTTCTTGAAGCTATTTaGAGGTATGTATTTGCTGTCTTAATCACAATCCCTTCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: LSRQCCHFQGFLEAI*RYVFAVLITIPSEW Trigger: CCATTCTGAAGGGATTGTGATTAAGACAGCAAATACATACCTCAAAATAGCTTCAAGAAATCCCTGAAAGTGACAGCATTGTCTGCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCAAGACAGTTTTCCTGTaGAGGGATTTGCTATATTCC | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCKTVFL*RDLLYS Trigger: GGAATATAGCAAATCCCTTCACAGGAAAACTGTCTT...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCGTGCAGCATGCTATTTaGATTCACACAAACATGACT | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCVQHAI*IHTNMT Trigger: AGTCATGTTTGTGTGAATGCAAATAGCATGCTGCAC...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCCATAGAGTAATGGTGTaGAGAGAGAAAACAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCHRVMV*REKTRD Trigger: ATCTCTTGTTTTCTCTCTTCACACCATTACTCTATG...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTGGGTCATTTCAGTCTaGAGAAAACTGTTACACAAT | + |
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Preference number: 2 (lower is better) Translates to: FSSYGNTISKNFHFPKVCWVISV*RKLLHN Trigger: ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTTTTGAGGTATGTATTTaGTGTCTTAATCACAATCCC | + |
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Preference number: 2 (lower is better) Translates to: YRVQHAICIHTNMTTAILFEVCI*CLNHNP Trigger: GGGATTGTGATTAAGACAGCAAATACATACCTCAAA...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR GCA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTTTTGAGGTATGTATTTaGTGTCTTAATCACAATCCC | + |
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Preference number: 2 (lower is better) Translates to: AHLGHVHSQTNYIFPYYAFEVCI*CLNHNP Trigger: GGGATTGTGATTAAGACAGCAAATACATACCTCAAA...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CCA 90 bp | ATCACAATCCCTTCAGAATGGGTCATTTCAGTCTGCAGAAAACTGTTACACAATCTAAGACAGCCTTTCTaGGTAAAAGATTTATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ITIPSEWVISVCRKLLHNLRQPF*VKDLSD Trigger: ATCTGATAAATCTTTTACCCAGAAAGGCTGTCTTAG...ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR TCA 72 bp | GAGGCAGAGTCCAGGCTTGGTCTACATTGGGTGTTCTaGCACAGACAGGGTAGCACACTGAAATATATACCC | + |
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Preference number: 3 (lower is better) Translates to: EAESRLGLHWVF*HRQGSTLKYIP Trigger: GGGTATATATTTCAGTGTGCTACCCTGTCTGTGTCAGAACACCCAATGTAGACCAAGCCTGGACTCTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR CCA 72 bp | CAATGTTTTACAACATGTATGCATGTAGCTTGCTTGTaGCTGGTAGGTGCTGAGGCCAGAAAGCACCTGATC | + |
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Preference number: 3 (lower is better) Translates to: QCFTTCMHVACL*LVGAEARKHLI Trigger: GATCAGGTGCTTTCTGGCCTCAGCACCTACCAGCCACAAGCAAGCTACATGCATACATGTTGTAAAACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR GCA 72 bp | TCACTAGAACCCCAAGGCTCGATACAGAGTGCAGCATaGTATTTGCATTCACACAAACATGACTACTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: SLEPQGSIQSAA*YLHSHKHDYCN Trigger: ATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTATCGAGCCTTGGGGTTCTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR GCA 72 bp | ATGTATCAATGTTTTACAACATGTATGCATGTAGCTTaGTTGTGGCTGGTAGGTGCTGAGGCCAGAAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: MYQCFTTCMHVA*LWLVGAEARKH Trigger: GTGCTTTCTGGCCTCAGCACCTACCAGCCACAAGCAAGCTACATGCATACATGTTGTAAAACATTGATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR GCA 72 bp | GTGGGTTGGTCACTTTATGACCTATCCTTCAGTCTCTaGTCCATGTTTTTGCCTGCATTTCCTTTAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: VGWSLYDLSFSL*SMFLPAFPLNK Trigger: CTTGTTTAAAGGAAATGCAGGCAAAAACATGGAGCAGAGACTGAAGGATAGGTCATAAAGTGACCAACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTAGTGCAGCATGCTATTaGCATTCACACAAACATGAC | + |
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Preference number: 3 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVSAACY*HSHKHD Trigger: GTCATGTTTGTGTGAATGCAAATAGCATGCTGCACT...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CAA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTAGTGCAGCATGCTATTaGCATTCACACAAACATGAC | + |
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Preference number: 3 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPSAACY*HSHKHD Trigger: GTCATGTTTGTGTGAATGCAAATAGCATGCTGCACT...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR TCA 72 bp | TACATTGGGTGTTCTGACACAGACAGGGTAGCACACTaGAATATATACCCAGCAAAAAGAAACAAGACCAAG | + |
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Preference number: 3 (lower is better) Translates to: YIGCSDTDRVAH*NIYPAKRNKTK Trigger: CTTGGTCTTGTTTCTTTTTGCTGGGTATATATTTCAGTGTGCTACCCTGTCTGTGTCAGAACACCCAATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR CCA 72 bp | TCCAGGTCTCTGGTCTGTTTCATTCAGCCCAAGCTATaGGAAAGTGACTTTTTCAAAACATCTAGGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: SRSLVCFIQPKL*ESDFFKTSRIS Trigger: AGAAATCCTAGATGTTTTGAAAAAGTCACTTTCCCATAGCTTGGGCTGAATGAAACAGACCAGAGACCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR-3UTR CAA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTAGAGAAATCACACATTaGATGTTTTCACTAGAACCC | + |
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Preference number: 3 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPREITH*MFSLEP Trigger: GGGTTCTAGTGAAAACATCAAATGTGTGATTTCTCT...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| 3UTR TCA 72 bp | AGCCTTACAACTGCCCAAAGGACCAATGTGAAGAATTaGAAATACCATGCAATGTTTATTTCTACTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLTTAQRTNVKN*KYHAMFISTLK Trigger: CTTCAGAGTAGAAATAAACATTGCATGGTATTTTCAATTCTTCACATTGGTCCTTTGGGCAGTTGTAAGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR GCA 72 bp | CTTTTCTGGGTTTCATCATTTGACTTAAGCAGACAATaGTGTCACTTTCAGGGATTTCTTGAAGCTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFWVSSFDLSRQ*CHFQGFLEAIL Trigger: CAAAATAGCTTCAAGAAATCCCTGAAAGTGACAGCATTGTCTGCTTAAGTCAAATGATGAAACCCAGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR GCA 72 bp | TTTACTAAATTCCTTGCTGCTAAAATAGGAGTTAATTaGCACAAGTCAATAGCTTTTGGCCACACAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FTKFLAAKIGVN*HKSIAFGHTRE Trigger: CTCTCTTGTGTGGCCAAAAGCTATTGACTTGTGGCAATTAACTCCTATTTTAGCAGCAAGGAATTTAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
||
| 3UTR TCA 72 bp | CTTAAGCAGACAATGCTGTCACTTTCAGGGATTTCTTaGAGCTATTTTGAGGTATGTATTTGCTGTCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKQTMLSLSGIS*SYFEVCICCLN Trigger: ATTAAGACAGCAAATACATACCTCAAAATAGCTTCAAGAAATCCCTGAAAGTGACAGCATTGTCTGCTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR TCA 72 bp | ACAGAGTGCAGCATGCTATTTGCATTCACACAAACATaGCTACTGCAATTCTTCAATATCAAATCTATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: TECSMLFAFTQT*LLQFFNIKSMY Trigger: GTACATAGATTTGATATTGAAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR GCA 72 bp | GCAGCATGCTATTTGCATTCACACAAACATGACTACTaGAATTCTTCAATATCAAATCTATGTACAAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AACYLHSHKHDY*NSSISNLCTKH Trigger: GTGCTTTGTACATAGATTTGATATTGAAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR CCA 72 bp | TATCAAATCTATGTACAAAGCACAGTAATTAGGGCCTaGACATTACAATTCCTCCTGAATGAAGTGCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: YQIYVQSTVIRA*TLQFLLNEVHN Trigger: ATTATGCACTTCATTCAGGAGGAATTGTAATGTCCAGGCCCTAATTACTGTGCTTTGTACATAGATTTGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGGCAGAGTCCAGGCTTGGTCTACATTGGGTGTTCTGACACAGACAGGGATGCAGTTGGAGGTGTaGCAAATGCAGAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGRVQAWSTLGVLTQTGMQLEV*QMQKGF Trigger: AAATCCTTTCTGCATTTGTCACACCTCCAACTGCAT...CCCTGTCTGTGTCAGAACACCCAATGTAGACCAAGCCTGGACTCTGCCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR CAA 72 bp | GCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTaGGTCTACATTGGGTGTTCTGACACAGACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALILASRRQSPG*VYIGCSDTDRV Trigger: TACCCTGTCTGTGTCAGAACACCCAATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGCAGAGTCCAGGCTTGGTCTACATTGGGTGTTCTGACACAGACAGGGAGGCATCTCTGTTGTTaGTTTGATAAGGTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGRVQAWSTLGVLTQTGRHLCC*FDKVYF Trigger: AAAGTACACCTTATCAAACCAACAACAGAGATGCCT...CCCTGTCTGTGTCAGAACACCCAATGTAGACCAAGCCTGGACTCTGCCTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAGGCTTGAGGTCATCGTaGAGAATTTTCCAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSGLRSS*RIFQTS Trigger: GGAAGTCTGGAAAATTCTTCACGATGACCTCAAGCC...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGGTGGTCTTTCCGGTaGAAGGATTTGTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSRWSFR*KDLSQS Trigger: TGACTGTGACAAATCCTTCCACCGGAAAGACCACCT...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAACTTGCATGGTTCCCTaGCATTCTCAGTTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSTCMVP*HSQFCV Trigger: GACACAAAACTGAGAATGCCAGGGAACCATGCAAGT...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR CAA 72 bp | TATCAATGTTTTACAACATGTATGCATGTAGCTTGCTaGTGGCTGGTAGGTGCTGAGGCCAGAAAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQCFTTCMHVAC*WLVGAEARKHL Trigger: CAGGTGCTTTCTGGCCTCAGCACCTACCAGCCACAAGCAAGCTACATGCATACATGTTGTAAAACATTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTCAACAGCCACTTCCTTaGATGTTAACAGTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVQQPLP*MLTVPG Trigger: CCCAGGAACTGTTAACATTCAAGGAAGTGGCTGTTG...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAATGCAGTTGGAGGTGTaGCAAATGCAGAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSMQLEV*QMQKGF Trigger: AAATCCTTTCTGCATTTGTCACACCTCCAACTGCAT...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATGTGCATTCTAAGATATaGGCCACTAGTGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VQCFNSSIQEAESRLGLHVHSKI*ATSEAF Trigger: AAATGCTTCACTAGTGGCTCATATCTTAGAATGCAC...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR GCA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATTGGAGGTGTGACAAATaGAGAAAGGATTTACTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VQCFNSSIQEAESRLGLHWRCDK*RKDLLH Trigger: GTGTAGTAAATCCTTTCTGCATTTGTCACACCTCCA...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCACTATACTTTGAGCCTTaGCCCAAGACTTCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSLYFEP*PKTSSC Trigger: ACATGATGAAGTCTTGGGCCAAGGCTCAAAGTATAG...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATCTAAGAAGGCATCTCTaGGTAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQCFNSSIQEAESRLGLHLRRHL*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAGATGCCTTCTTAG...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTATGACTTCTAAGATATaGGCCACCAGCAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVMTSKI*ATSKGL Trigger: AAGGCCTTTGCTGGTGGCTCATATCTTAGAAGTCAT...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTGTCCTTATACTTGCATaGTTCCCTGGCATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVVLILA*FPGILS Trigger: ACTGAGAATGCCAGGGAACCATGCAAGTATAAGGAC...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTGTCCTTATACTTGCATaGTTCCCTGGCATTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPVLILA*FPGILS Trigger: ACTGAGAATGCCAGGGAACCATGCAAGTATAAGGAC...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | ATCACAATCCCTTCAGAATGGGTCATTTCAGTCTGCAGAAAACTGTTACACAATGGCTTGAGGTCATCGTaGAGAATTTTCCAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITIPSEWVISVCRKLLHNGLRSS*RIFQTS Trigger: GGAAGTCTGGAAAATTCTTCACGATGACCTCAAGCC...ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAATGTCTTTCAAAGCCTaGTGCATGATAAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSMSFKA*CMIKAL Trigger: AAGTGCTTTTATCATGCATCAGGCTTTGAAAGACAT...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCACTAAGATTGCTCTTCTaGGTAAAAGATTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SATVLVVGNVLMSSSRKSLRLLF*VKDLSQ Trigger: CTGTGACAAATCTTTTACCCAGAAGAGCAATCTTAG...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTAGGTGGTCTTTCCGGTaGAAGGATTTGTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRVQHAICIHTNMTTAILRWSFR*KDLSQS Trigger: TGACTGTGACAAATCCTTCCACCGGAAAGACCACCT...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCCAACAGCCACTTCCTTaGATGTTAACAGTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSYGNTISKNFHFPKVCQQPLP*MLTVPG Trigger: CCCAGGAACTGTTAACATTCAAGGAAGTGGCTGTTG...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTCTAACACTGCCTTTCTaGGTAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVLTLPF*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAAAGGCAGTGTTAG...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTTTATTAGACTTCTCTTaGATATTCACATGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPLLDFS*IFTCSG Trigger: CCCTGAGCATGTGAATATTCAAGAGAAGTCTAATAA...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTAAGACTGCATTTCTaGGTAAAGCATTTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPLRLHF*VKHLSQ Trigger: CTGTGATAAATGCTTTACTCAGAAATGCAGTCTTAG...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGAGCTTTTCTTTATCTCAGCAACAAAGGTTTTTGAGAGCCTCTTTTCTATACTTTGAGCCTTaGCCCAAGACTTCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGWSFSLSQQQRFLRASFLYFEP*PKTSSC Trigger: ACATGATGAAGTCTTGGGCCAAGGCTCAAAGTATAG...AAAAGAGGCTCTCAAAAACCTTTGTTGCTGAGATAAAGAAAAGCTCCAACCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTAGGCATCTCTGTTGTTaGTTTGATAAGGTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVRHLCC*FDKVYF Trigger: AAAGTACACCTTATCAAACCAACAACAGAGATGCCT...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTCTTTTGGAGGATTCATaGATCATTTTGCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGHVHSQTNYIFPYYALLEDS*IILPHS Trigger: GGAATGTGGCAAAATGATTCATGAATCCTCCAAAAG...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTGTGCATTCTAAGATATaGGCCACTAGTGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AHLGHVHSQTNYIFPYYAVHSKI*ATSEAF Trigger: AAATGCTTCACTAGTGGCTCATATCTTAGAATGCAC...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTTGGAGGTGTGACAAATaGAGAAAGGATTTACTACAC | + |
|
Preference number: 4 (lower is better) Translates to: YRVQHAICIHTNMTTAILWRCDK*RKDLLH Trigger: GTGTAGTAAATCCTTTCTGCATTTGTCACACCTCCA...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGAGCTTTTCTTTATCTCAGCAACAAAGGTTTTTGAGAGCCTCTTTTCTAAGAAGGCATCTCTaGGTAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGWSFSLSQQQRFLRASFLRRHL*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAGATGCCTTCTTAG...AAAAGAGGCTCTCAAAAACCTTTGTTGCTGAGATAAAGAAAAGCTCCAACCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTCTAACACTGCCTTTCTaGGTAAAGCATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YRVQHAICIHTNMTTAILLTLPF*VKHLSH Trigger: ATGTGACAAATGCTTTACCCAGAAAGGCAGTGTTAG...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTTTATTAGACTTCTCTTaGATATTCACATGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRVQHAICIHTNMTTAILLLDFS*IFTCSG Trigger: CCCTGAGCATGTGAATATTCAAGAGAAGTCTAATAA...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| 3UTR CAA 72 bp | CAATGCTGTCACTTTCAGGGATTTCTTGAAGCTATTTaGAGGTATGTATTTGCTGTCTTAATCACAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCCHFQGFLEAI*RYVFAVLITIP Trigger: AGGGATTGTGATTAAGACAGCAAATACATACCTCAAAATAGCTTCAAGAAATCCCTGAAAGTGACAGCATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCATGTCTTTCAAAGCCTaGTGCATGATAAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FSSYGNTISKNFHFPKVCMSFKA*CMIKAL Trigger: AAGTGCTTTTATCATGCATCAGGCTTTGAAAGACAT...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCCTAAGATTGCTCTTCTaGGTAAAAGATTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSYGNTISKNFHFPKVCLRLLF*VKDLSQ Trigger: CTGTGACAAATCTTTTACCCAGAAGAGCAATCTTAG...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | ATCACAATCCCTTCAGAATGGGTCATTTCAGTCTGCAGAAAACTGTTACACAATCTAAGAGAGCCAGTCTaGATAAAGGAATTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITIPSEWVISVCRKLLHNLREPV*IKEFSN Trigger: ATTTGAAAATTCCTTTATCCAGACTGGCTCTCTTAG...ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCCTAAGAGAGCCAGTCTaGATAAAGGAATTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSYGNTISKNFHFPKVCLREPV*IKEFSN Trigger: ATTTGAAAATTCCTTTATCCAGACTGGCTCTCTTAG...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGCAGAGTCCAGGCTTGGTCTACATTGGGTGTTCTGACACAGACAGGGCTCCGGTTAAAGGATTaGTCACATCCACTACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGGRVQAWSTLGVLTQTGLRLKD*SHPLHL Trigger: CAAATGTAGTGGATGTGACAAATCCTTTAACCGGAG...CCCTGTCTGTGTCAGAACACCCAATGTAGACCAAGCCTGGACTCTGCCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
||
| CDS-3UTR CAA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATCTCCGGTTAAAGGATTaGTCACATCCACTACATTTG | + |
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Preference number: 5 (lower is better) Translates to: VQCFNSSIQEAESRLGLHLRLKD*SHPLHL Trigger: CAAATGTAGTGGATGTGACAAATCCTTTAACCGGAG...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATCAGTTTTGTGTCTGTTaGATGATTCAATGGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: VQCFNSSIQEAESRLGLHQFCVC*MIQWRH Trigger: ATGCCTCCATTGAATCATCAAACAGACACAAAACTG...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATCTGGCATTCTCAGTTTaGTGTCTGTTTGATGATTCA | + |
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Preference number: 5 (lower is better) Translates to: VQCFNSSIQEAESRLGLHLAFSV*CLFDDS Trigger: TGAATCATCAAACAGACACAAAACTGAGAATGCCAG...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | GTACAGTGCTTTAATTCTAGCATCCAGGAGGCAGAGTCCAGGCTTGGTCTACATATCTCTGTTGTTGGTTaGATAAGGTGTACTTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: VQCFNSSIQEAESRLGLHISVVG*IRCTFG Trigger: TCCAAAAGTACACCTTATCAAACCAACAACAGAGAT...ATGTAGACCAAGCCTGGACTCTGCCTCCTGGATGCTAGAATTAAAGCACTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCACAGTTTTGTGTCTGTTaGATGATTCAATGGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SATVLVVGNVLMSSSRKSQFCVC*MIQWRH Trigger: ATGCCTCCATTGAATCATCAAACAGACACAAAACTG...TGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS TCA 90 bp | ATTAGACTTCTCTTGAATATTCACATGCTCAGGGGCACTATACTTTaGGCCTTGGCCCAAGACTTCATCATGTTTGACACACACATGATG | + |
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Preference number: 5 (lower is better) Translates to: IRLLLNIHMLRGTIL*ALAQDFIMFDTHMM Trigger: CATCATGTGTGTGTCAAACATGATGAAGTCTTGGGCCAAGGCTCAAAGTATAGTGCCCCTGAGCATGTGAATATTCAAGAGAAGTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | GCACACCTGGGACACGTACACAGTCAAACAAATTATATTTTTCCCTATTATGCTTTCCGGTGGAAGGATTaGTCACAGTCACTGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: AHLGHVHSQTNYIFPYYAFRWKD*SQSLHL Trigger: CAAATGCAGTGACTGTGACAAATCCTTCCACCGGAA...AGCATAATAGGGAAAAATATAATTTGTTTGACTGTGTACGTGTCCCAGGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTTTCCGGTGGAAGGATTaGTCACAGTCACTGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: YRVQHAICIHTNMTTAILFRWKD*SQSLHL Trigger: CAAATGCAGTGACTGTGACAAATCCTTCCACCGGAA...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | ATCACAATCCCTTCAGAATGGGTCATTTCAGTCTGCAGAAAACTGTTACACAATTCAACAGCCACTTCCTaGAATGTTAACAGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ITIPSEWVISVCRKLLHNSTATS*NVNSSW Trigger: CCAGGAACTGTTAACATTCAAGGAAGTGGCTGTTGA...ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | ACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTTCAAGAAAATCAAGTGTTCTGGCATTCTCAGTTTaGTGTCTGTTTGATGATTCA | + |
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Preference number: 5 (lower is better) Translates to: TVLVVGNVLMSSSRKSSVLAFSV*CLFDDS Trigger: TGAATCATCAAACAGACACAAAACTGAGAATGCCAG...AACACTTGATTTTCTTGAAGAGGACATGAGTACATTTCCCACCACCAGCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | ATCACAATCCCTTCAGAATGGGTCATTTCAGTCTGCAGAAAACTGTTACACAATCCAGACTTCCTGCACTaGTGTGATTTCATTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: ITIPSEWVISVCRKLLHNPDFLH*CDFIPL Trigger: TAGTGGAATGAAATCACACAAGTGCAGGAAGTCTGG...ATTGTGTAACAGTTTTCTGCAGACTGAAATGACCCATTCTGAAGGGATTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTCCAGACTTCCTGCACTaGTGTGATTTCATTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: YRVQHAICIHTNMTTAILPDFLH*CDFIPL Trigger: TAGTGGAATGAAATCACACAAGTGCAGGAAGTCTGG...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CCA 90 bp | ACAAATTTAAGCCATTCACACAGTCCTTATACTTGCATGGTTCCCTaGCATTCTCAGTTTTGTGTCTGTTTGATGATTCAATGGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: TNLSHSHSPYTCMVP*HSQFCVCLMIQWRH Trigger: ATGCCTCCATTGAATCATCAAACAGACACAAAACTGAGAATGCCAGGGAACCATGCAAGTATAAGGACTGTGTGAATGGCTTAAATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | AATTATGAATTTTGTCAGCCACTGTGCTGGTGGTGGGAAATGTACTCATGTCCTCTGTCATTCTTCTTATaGCTCTTTTCCAAGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NYEFCQPLCWWWEMYSCPLSFFL*LFSKFL Trigger: CAGAAACTTGGAAAAGAGCAATAAGAAGAATGACAG...AGGACATGAGTACATTTCCCACCACCAGCACAGTGGCTGACAAAATTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088696.13 |
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| CDS-3UTR CAA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTCAACAGCCACTTCCTaGAATGTTAACAGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSSYGNTISKNFHFPKVCSTATS*NVNSSW Trigger: CCAGGAACTGTTAACATTCAAGGAAGTGGCTGTTGA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TACAGAGTGCAGCATGCTATTTGCATTCACACAAACATGACTACTGCAATTCTTTTCTGGGTAAAAGATTaGTCACAGTCACCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: YRVQHAICIHTNMTTAILFWVKD*SQSPHL Trigger: CAAATGTGGTGACTGTGACAAATCTTTTACCCAGAA...AAGAATTGCAGTAGTCATGTTTGTGTGAATGCAAATAGCATGCTGCACTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCTTCTGGGTAAAAGATTaGTCACAGTCACCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: FSSYGNTISKNFHFPKVCFWVKD*SQSPHL Trigger: CAAATGTGGTGACTGTGACAAATCTTTTACCCAGAA...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS-3UTR CAA 90 bp | TTCTCATCATATGGGAACACCATCAGCAAGAATTTTCACTTTCCTAAAGTTTGCATCTCTGTTGTTGGTTaGATAAGGTGTACTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSSYGNTISKNFHFPKVCISVVG*IRCTFG Trigger: TCCAAAAGTACACCTTATCAAACCAACAACAGAGAT...GCAAACTTTAGGAAAGTGAAAATTCTTGCTGATGGTGTTCCCATATGATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS TCA 72 bp | CTCTCTAGCATGATCTCTCGGATGCCCACTCAGGCTTaGGGTCATCGTGAAGAATTTTCCAGACTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSMISRMPTQA*GHREEFSRLPA Trigger: TGCAGGAAGTCTGGAAAATTCTTCACGATGACCTCAAGCCTGAGTGGGCATCCGAGAGATCATGCTAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CAA 72 bp | TGCATGGTTCCCTGGCATTCTCAGTTTTGTGTCTGTTaGATGATTCAATGGAGGCATCTCTGTTGTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: CMVPWHSQFCVC*MIQWRHLCCWF Trigger: AAACCAACAACAGAGATGCCTCCATTGAATCATCAAACAGACACAAAACTGAGAATGCCAGGGAACCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CAA 72 bp | TCCTTATACTTGCATGGTTCCCTGGCATTCTCAGTTTaGTGTCTGTTTGATGATTCAATGGAGGCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLYLHGSLAFSV*CLFDDSMEASL Trigger: CAGAGATGCCTCCATTGAATCATCAAACAGACACAAAACTGAGAATGCCAGGGAACCATGCAAGTATAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CAA 90 bp | TTCACACAGTCCTTATACTTGCATGGTTCCCTGGCATTCTCAGTTTaGTGTCTGTTTGATGATTCAATGGAGGCATCTCTGTTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: FTQSLYLHGSLAFSV*CLFDDSMEASLLLV Trigger: AACCAACAACAGAGATGCCTCCATTGAATCATCAAACAGACACAAAACTGAGAATGCCAGGGAACCATGCAAGTATAAGGACTGTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CCA 72 bp | AGCCATTCACACAGTCCTTATACTTGCATGGTTCCCTaGCATTCTCAGTTTTGTGTCTGTTTGATGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: SHSHSPYTCMVP*HSQFCVCLMIQ Trigger: TTGAATCATCAAACAGACACAAAACTGAGAATGCCAGGGAACCATGCAAGTATAAGGACTGTGTGAATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CAA 90 bp | CTCAGGCTTGAGGTCATCGTGAAGAATTTTCCAGACTTCCTGCACTaGTGTGATTTCATTCCACTATTGTTTCCTTTTAGCATGAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LRLEVIVKNFPDFLH*CDFIPLLFPFSMSL Trigger: TAAACTCATGCTAAAAGGAAACAATAGTGGAATGAAATCACACAAGTGCAGGAAGTCTGGAAAATTCTTCACGATGACCTCAAGCCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS TCA 72 bp | CTTTGTAGCATGGATTCTGCAATGTCTTTCAAAGCCTaGTGCATGATAAAAGCACTTACCGCATTCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LCSMDSAMSFKA*CMIKALTAFCT Trigger: TGTACAGAATGCGGTAAGTGCTTTTATCATGCATCAGGCTTTGAAAGACATTGCAGAATCCATGCTACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CCA 72 bp | GTCTGTTTGATGATTCAATGGAGGCATCTCTGTTGTTaGTTTGATAAGGTGTACTTTTGGAGGATTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: VCLMIQWRHLCC*FDKVYFWRIHE Trigger: TTCATGAATCCTCCAAAAGTACACCTTATCAAACCAACAACAGAGATGCCTCCATTGAATCATCAAACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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| CDS CAA 72 bp | CCAGACTTCCTGCACTTGTGTGATTTCATTCCACTATaGTTTCCTTTTAGCATGAGTTTATATTTAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PDFLHLCDFIPL*FPFSMSLYLER Trigger: TCTCTCTAAATATAAACTCATGCTAAAAGGAAACAATAGTGGAATGAAATCACACAAGTGCAGGAAGTCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088696.13 ENSMUST00000160457.10 |
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