Pregenerated sensors for ZFP944 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033972Ensembl transcript IDs: ENSMUST00000115535.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACAGCATTCCATTTTGGTaGCTCAGTTTATCAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: YSYIQDYGEGVGDQSPRDSIPFW*LSLSNP Trigger: AGGGTTTGATAAACTGAGCCACCAAAATGGAATGCT...GTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCGTCTCCACAAAAGTGTTACAGATTCTTGTGGCTTCTCTTCTTTGTCTTTGGAGCCTAAAGTGTTaGAAAGAATTCCACTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ISVSTKVLQILVASLLCLWSLKC*KEFHLG Trigger: ACCCAAGTGGAATTCTTTGCAACACTTTAGGCTCCA...AAGACAAAGAAGAGAAGCCACAAGAATCTGTAACACTTTTGTGGAGACGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR-3UTR TCA 90 bp | GCCACATGTTTTCCAGCAGAAACTACTTTTCAGGTAAAGCTCTTTCCTCATGTTATGTACTGTCAGAGATaGGCTAACAGTAAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: ATCFPAETTFQVKLFPHVMYCQR*ANSKGF Trigger: AAATCCTTTACTGTTAGCTCATCTCTGACAGTACAT...AACATGAGGAAAGAGCTTTACCTGAAAAGTAGTTTCTGCTGGAAAACATGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR TCA 72 bp | TTACAGTTATATACAGGACTATGGGGAAGGAGTTGGTaGTCAGAGCCCAAGGGACTCAAAGACACTTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: LQLYTGLWGRSW*SEPKGLKDTCY Trigger: ATAGCAAGTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR-3UTR CAA 90 bp | TACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTGTGGCTTCTCTTCTTaGTCTTCATTATGGAACATT | + |
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Preference number: 3 (lower is better) Translates to: YSYIQDYGEGVGDQSPRDCGFSS*SSLWNI Trigger: AATGTTCCATAATGAAGACAAAGAAGAGAAGCCACA...GTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAACCAGCATGATACAGATTTTGAATACACTGAGGGCAAACTGTATCTGTGTGGAGCCTAAAGTGTaGCAAAGAATTCCACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LETSMIQILNTLRANCICVEPKV*QRIPLG Trigger: CCCAAGTGGAATTCTTTGCAACACTTTAGGCTCCAC...ACAGATACAGTTTGCCCTCAGTGTATTCAAAATCTGTATCATGCTGGTTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR CCA 72 bp | TGTAGGAATACTGGCATGAAGAGCATTCCATTTTGGTaGCTCAGTTTATCAAACCCTCTTTTAACAAATATG | + |
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Preference number: 3 (lower is better) Translates to: CRNTGMKSIPFW*LSLSNPLLTNM Trigger: CATATTTGTTAAAAGAGGGTTTGATAAACTGAGCCACCAAAATGGAATGCTCTTCATGCCAGTATTCCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR CCA 72 bp | ATCTGTAGGAATACTGGCATGAAGAGCATTCCATTTTaGTGGCTCAGTTTATCAAACCCTCTTTTAACAAAT | + |
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Preference number: 3 (lower is better) Translates to: ICRNTGMKSIPF*WLSLSNPLLTN Trigger: ATTTGTTAAAAGAGGGTTTGATAAACTGAGCCACCAAAATGGAATGCTCTTCATGCCAGTATTCCTACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGTGTATTATCCACCATAATCAGATTTCCTCTGTAATGGATTATTTCCGTTGCAAAGAATTCCACTaGGGTAAAATACATGCCACA | + |
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Preference number: 3 (lower is better) Translates to: EKCIIHHNQISSVMDYFRCKEFH*GKIHAT Trigger: TGTGGCATGTATTTTACCCAAGTGGAATTCTTTGCA...ACGGAAATAATCCATTACAGAGGAAATCTGATTATGGTGGATAATACACTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CCA 90 bp | TACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACCTAAGACTGCGTTTGTaGGTAAAGCATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YSYIQDYGEGVGDQSPRDLRLRL*VKHLSH Trigger: ATGTGACAAATGCTTTACCCACAAACGCAGTCTTAG...GTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR TCA 90 bp | GCCACATGTTTTCCAGCAGAAACTACTTTTCAGGTAAAGCTCTTTCCTCATGTTTCCTTGAATGTTAACTaGCCCTGGGGAGCATTTACC | + |
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Preference number: 4 (lower is better) Translates to: ATCFPAETTFQVKLFPHVSLNVN*PWGAFT Trigger: GGTAAATGCTCCCCAGGGTCAGTTAACATTCAAGGA...AACATGAGGAAAGAGCTTTACCTGAAAAGTAGTTTCTGCTGGAAAACATGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CCA 90 bp | ATTACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGGTTTCTTTCCACTATTaGTTTGTTTCAGCCCGAGTA | + |
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Preference number: 4 (lower is better) Translates to: ITVIYRTMGKELVIRAQGVSFHY*FVSARV Trigger: TACTCGGGCTGAAACAAACCAATAGTGGAAAGAAAC...CCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CCA 90 bp | TACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACATAAGATGGCCTTTCTaGGTAAAAGATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YSYIQDYGEGVGDQSPRDIRWPF*VKDLSH Trigger: ATGTGACAAATCTTTTACCCAGAAAGGCCATCTTAT...GTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR CAA 72 bp | CTAGTGTGGAGCCTAAAGTGTTGCAAAGAATTCCACTaGGGTAAAATACATGCCACATGTTTTCCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVWSLKCCKEFH*GKIHATCFPAE Trigger: TTCTGCTGGAAAACATGTGGCATGTATTTTACCCAAGTGGAATTCTTTGCAACACTTTAGGCTCCACACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR GCA 90 bp | TGCAAAGAATTCCACTTGGGTAAAATACATGCCACATGTTTTCCAGCAGAAACTAACATCCATGTACAATaGCCTCTGAGCACAGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: CKEFHLGKIHATCFPAETNIHVQ*PLSTVK Trigger: CTTGACTGTGCTCAGAGGGCATTGTACATGGATGTT...AGTTTCTGCTGGAAAACATGTGGCATGTATTTTACCCAAGTGGAATTCTTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR TCA 90 bp | GCCACATGTTTTCCAGCAGAAACTACTTTTCAGGTAAAGCTCTTTCCTCATGTTATATGCTGTGTGTCTTaGTCCAAGACATTCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: ATCFPAETTFQVKLFPHVICCVS*SKTFSY Trigger: ATATGAGAATGTCTTGGATCAAGACACACAGCATAT...AACATGAGGAAAGAGCTTTACCTGAAAAGTAGTTTCTGCTGGAAAACATGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR TCA 90 bp | GAGAAGTGTATTATCCACCATAATCAGATTTCCTCTGTAATGGATTATTTCCGTGCTTGCATTTCTTGGTaGAGCATCTGGAACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: EKCIIHHNQISSVMDYFRACISW*SIWNIH Trigger: GTGAATGTTCCAGATGCTTCACCAAGAAATGCAAGC...ACGGAAATAATCCATTACAGAGGAAATCTGATTATGGTGGATAATACACTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR TCA 90 bp | CTTGAAACCAGCATGATACAGATTTTGAATACACTGAGGGCAAACTGTATCTGTGATCACCTTTGTGAGTaGAGCATTTTTCACATTTGC | + |
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Preference number: 4 (lower is better) Translates to: LETSMIQILNTLRANCICDHLCE*SIFHIC Trigger: GCAAATGTGAAAAATGCTTCACTCACAAAGGTGATC...ACAGATACAGTTTGCCCTCAGTGTATTCAAAATCTGTATCATGCTGGTTTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| 3UTR CAA 72 bp | GGATTATTTCCGTCTCCACAAAAGTGTTACAGATTCTaGTGGCTTCTCTTCTTTGTCTTCATTATGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: GLFPSPQKCYRF*WLLFFVFIMEH Trigger: ATGTTCCATAATGAAGACAAAGAAGAGAAGCCACAAGAATCTGTAACACTTTTGTGGAGACGGAAATAATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | TACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACGGTTTCTTTCCACTATaGGTTTGTTTCAGCCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: YSYIQDYGEGVGDQSPRDGFFPL*VCFSPS Trigger: ACTCGGGCTGAAACAAACCAATAGTGGAAAGAAACC...GTCCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | ATTACAGTTATATACAGGACTATGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGTCAAGCACTGTCCCATaGTGTTCTTTCTTTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: ITVIYRTMGKELVIRAQGSSTVP*CSFFPM Trigger: CATAGGAAAGAAAGAACACAATGGGACAGTGCTTGA...CCCTTGGGCTCTGATCACCAACTCCTTCCCCATAGTCCTGTATATAACTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | ATTTCCGTCTCCACAAAAGTGTTACAGATTCTTGTGGCTTCTCTTCTTTGTCTTCTAAGCTTGCATTTCTaGGTGAAGCATCTGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: ISVSTKVLQILVASLLCLLSLHF*VKHLEH Trigger: ATGTTCCAGATGCTTCACCAAGAAATGCAAGCTTAG...AAGACAAAGAAGAGAAGCCACAAGAATCTGTAACACTTTTGTGGAGACGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | CTTGAAACCAGCATGATACAGATTTTGAATACACTGAGGGCAAACTGTATCTGTTGGATATTTACATGCTaGTGGAAAATATGCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LETSMIQILNTLRANCICWIFTC*WKICCV Trigger: CACACAGCATATTTTCCACAAGCATGTAAATATCCA...ACAGATACAGTTTGCCCTCAGTGTATTCAAAATCTGTATCATGCTGGTTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | TGCAAAGAATTCCACTTGGGTAAAATACATGCCACATGTTTTCCAGCAGAAACTTTTCAGCCCGAGTATTaGTTTAGAGTCAAAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: CKEFHLGKIHATCFPAETFQPEY*FRVKNL Trigger: AAGGTTTTTGACTCTAAACAAATACTCGGGCTGAAA...AGTTTCTGCTGGAAAACATGTGGCATGTATTTTACCCAAGTGGAATTCTTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | CTTAGGTGCTTTCACAAGATCTTAATATTCATAATTAACTCTAGTGTGGAGCCTAATATGCTGTGTGTCTaGATCCAAGACATTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LRCFHKILIFIINSSVEPNMLCV*IQDILI Trigger: TATGAGAATGTCTTGGATCAAGACACACAGCATATT...AGGCTCCACACTAGAGTTAATTATGAATATTAAGATCTTGTGAAAGCACCTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS-3UTR CAA 90 bp | GAGAAGTGTATTATCCACCATAATCAGATTTCCTCTGTAATGGATTATTTCCGTACTATGACTGCATTTTaGGGAAAAGCATTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: EKCIIHHNQISSVMDYFRTMTAF*GKAFVT Trigger: TGTGACAAATGCTTTTCCCAAAAATGCAGTCATAGT...ACGGAAATAATCCATTACAGAGGAAATCTGATTATGGTGGATAATACACTTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS CAA 90 bp | TCTGTAAGGTTTCTTTCCACTATTGGTTTGTTTCAGCCCGAGTATTaGTTTAGAGTCAAAAACCTTATCAAGCACTGTCCCATTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVRFLSTIGLFQPEY*FRVKNLIKHCPIVF Trigger: GAACACAATGGGACAGTGCTTGATAAGGTTTTTGACTCTAAACAAATACTCGGGCTGAAACAAACCAATAGTGGAAAGAAACCTTACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS CAA 72 bp | GATATTTACATGCTTGTGGAAAATATGCTGTGTGTCTaGATCCAAGACATTCTCATATTTAGGACACACACA | + |
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Preference number: 6 (lower is better) Translates to: DIYMLVENMLCV*IQDILIFRTHT Trigger: TGTGTGTGTCCTAAATATGAGAATGTCTTGGATCAAGACACACAGCATATTTTCCACAAGCATGTAAATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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| CDS TCA 72 bp | ATATTTACATGCTTGTGGAAAATATGCTGTGTGTCTTaGTCCAAGACATTCTCATATTTAGGACACACACAA | + |
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Preference number: 6 (lower is better) Translates to: IFTCLWKICCVS*SKTFSYLGHTQ Trigger: TTGTGTGTGTCCTAAATATGAGAATGTCTTGGATCAAGACACACAGCATATTTTCCACAAGCATGTAAATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115535.3 |
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