Pregenerated sensors for ZFP942 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071267Ensembl transcript IDs: ENSMUST00000074295.8, ENSMUST00000091879.12
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCCATACAGAATGCTTACTaGTATCACTCTTTTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VGKELVIRAQGTQRQFLSIQNAY*YHSFES Trigger: ACTCTCAAAAGAGTGATACCAGTAAGCATTCTGTAT...GGATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCGTAAAGAATTCCGCTTaGGTAAAATATATGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: CGEGVGDQSPRDSKTVSIVKNSA*VKYMPH Trigger: ATGTGGCATATATTTTACCCAAGCGGAATTCTTTAC...GATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCTGTTACAGATTCTTCTaGCTTCTCTACTTTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CGEGVGDQSPRDSKTVSICYRFF*LLYFVF Trigger: AAAGACAAAGTAGAGAAGCCAGAAGAATCTGTAACA...GATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR-3UTR TCA 90 bp | AATGAAATTTATTGCAGTTATATATACACGACTGTGGGGAAGGAGTTGGTGATCGGAATACTGGCATTTTaGTGGCTCAGTTTATCAAAT | + |
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Preference number: 2 (lower is better) Translates to: NEIYCSYIYTTVGKELVIGILAF*WLSLSN Trigger: ATTTGATAAACTGAGCCATCAAAATGCCAGTATTCC...GATCACCAACTCCTTCCCCACAGTCGTGTATATATAACTGCAATAAATTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR-3UTR CAA 90 bp | CGCCATATTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTTTCTTGGTGAAGGGTTaGTCTCATTTGCTTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: RHIQISSQMDCFSLHRSVFLVKG*SHLLHL Trigger: CAAATGAAGCAAATGAGACAAACCCTTCACCAAGAA...AACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAATATGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR-3UTR CAA 90 bp | CGCCATATTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTTGTAAAGAATTCCGCTaGGGTAAAATATATGCCACA | + |
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Preference number: 3 (lower is better) Translates to: RHIQISSQMDCFSLHRSVCKEFR*GKIYAT Trigger: TGTGGCATATATTTTACCCAAGCGGAATTCTTTACA...AACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAATATGGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR CCA 72 bp | GTCATATTATCCGCCATATTCAGATTTCCTCTCAAATaGATTGTTTCAGTCTCCATAGAAGTGTTACAGATT | + |
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Preference number: 3 (lower is better) Translates to: VILSAIFRFPLK*IVSVSIEVLQI Trigger: AATCTGTAACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAATATGGCGGATAATATGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR TCA 90 bp | GTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCCGATCACCTTTGTGAGTaGAGCATTTGTTGCATTCAC | + |
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Preference number: 4 (lower is better) Translates to: VGKELVIRAQGTQRQFLSDHLCE*SICCIH Trigger: GTGAATGCAACAAATGCTTCACTCACAAAGGTGATC...GGATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR TCA 90 bp | TGTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCGGGTGTATTCCTGGATaGTTTTGCCATGCTCATAAT | + |
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Preference number: 4 (lower is better) Translates to: CGEGVGDQSPRDSKTVSIGCIPG*FCHAHN Trigger: ATTATGAGCATGGCAAAATCATCCAGGAATACACCC...GATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CCA 90 bp | GTGGGGAAGGAGTTGGTGATCAGAGCCCAAGGGACTCAAAGACAGTTTCTATCCGTTTCTTTCCACTATTaGTTTGTTTCAGCCCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: VGKELVIRAQGTQRQFLSVSFHY*FVSAQV Trigger: TACTTGGGCTGAAACAAACCAATAGTGGAAAGAAAC...GGATAGAAACTGTCTTTGAGTCCCTTGGGCTCTGATCACCAACTCCTTCCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CCA 90 bp | ACAGATTATGAATACTTGACACTGAGGGCAATCTCTATCTGTAGGAATACTGGCCTAAGACCGCCTTTGTaGGTAAAGCATTTGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: TDYEYLTLRAISICRNTGLRPPL*VKHLSH Trigger: GTGTGACAAATGCTTTACCCACAAAGGCGGTCTTAG...GCCAGTATTCCTACAGATAGAGATTGCCCTCAGTGTCAAGTATTCATAATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR CAA 72 bp | CTAGTGTGGAGCGTCAAGTGTTGTAAAGAATTCCGCTaGGGTAAAATATATGCCACATGTTTTCCGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVWSVKCCKEFR*GKIYATCFPEE Trigger: TTCTTCCGGAAAACATGTGGCATATATTTTACCCAAGCGGAATTCTTTACAACACTTGACGCTCCACACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CCA 90 bp | AAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTCTTCTGGCTTCTCTACTTTGGGTGTATTCCTaGATGATTTTGCCATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KWIVSVSIEVLQILLASLLWVYS*MILPCS Trigger: TGAGCATGGCAAAATCATCCAGGAATACACCCAAAG...TAGAGAAGCCAGAAGAATCTGTAACACTTCTATGGAGACTGAAACAATCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR TCA 90 bp | AAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTCTTCTGGCTTCTCTAATATGCTGTGTGTCTTaGTCCAAGCCATTCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: KWIVSVSIEVLQILLASLICCVS*SKPFSY Trigger: ATATGAGAATGGCTTGGATCAAGACACACAGCATAT...TAGAGAAGCCAGAAGAATCTGTAACACTTCTATGGAGACTGAAACAATCCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR TCA 90 bp | CGCCATATTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTCAACATGTGTATCCCTaGAGTTATCTTGGTAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RHIQISSQMDCFSLHRSVQHVYP*SYLGKV Trigger: TACTTTACCAAGATAACTTCAGGGATACACATGTTG...AACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAATATGGCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR TCA 90 bp | AAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTCTTCTGGCTTCTCTACTAAGATCACCTTTGTaGGTGAAGCATTTGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KWIVSVSIEVLQILLASLLRSPL*VKHLLH Trigger: ATGCAACAAATGCTTCACTCACAAAGGTGATCTTAG...TAGAGAAGCCAGAAGAATCTGTAACACTTCTATGGAGACTGAAACAATCCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR CAA 72 bp | CTGAGGGCAATCTCTATCTGTAGGAATACTGGCATTTaGATGGCTCAGTTTATCAAATCCTCTTTTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: LRAISICRNTGI*MAQFIKSSFNK Trigger: TTTGTTAAAAGAGGATTTGATAAACTGAGCCATCAAAATGCCAGTATTCCTACAGATAGAGATTGCCCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| 3UTR CAA 72 bp | AACTTGAAACCAGCATATGATACAGATTATGAATACTaGACACTGAGGGCAATCTCTATCTGTAGGAATACT | + |
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Preference number: 4 (lower is better) Translates to: NLKPAYDTDYEY*TLRAISICRNT Trigger: AGTATTCCTACAGATAGAGATTGCCCTCAGTGTCAAGTATTCATAATCTGTATCATATGCTGGTTTCAAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CAA 90 bp | ACAGATTATGAATACTTGACACTGAGGGCAATCTCTATCTGTAGGAATACTGGCTTGTGGGTAAAGCATTaGTCACACTCACTACATTTA | + |
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Preference number: 5 (lower is better) Translates to: TDYEYLTLRAISICRNTGLWVKH*SHSLHL Trigger: TAAATGTAGTGAGTGTGACAAATGCTTTACCCACAA...GCCAGTATTCCTACAGATAGAGATTGCCCTCAGTGTCAAGTATTCATAATCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CAA 90 bp | TTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTGGTTTCTTTCCACTATaGGTTTGTTTCAGCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: FRFPLKWIVSVSIEVLQIGFFPL*VCFSPS Trigger: ACTTGGGCTGAAACAAACCAATAGTGGAAAGAAACC...AATCTGTAACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CAA 90 bp | TTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTTTAAGCACTGTCCCATaGTGTTCTTTCTTTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: FRFPLKWIVSVSIEVLQILSTVP*CSFFPM Trigger: CATAGGAAAGAAAGAACACAATGGGACAGTGCTTAA...AATCTGTAACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS-3UTR CAA 90 bp | TTCAGATTTCCTCTCAAATGGATTGTTTCAGTCTCCATAGAAGTGTTACAGATTCTAAGCTTACATTTCTaGGTGAAGCATCTGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: FRFPLKWIVSVSIEVLQILSLHF*VKHLEH Trigger: ATGTTCCAGATGCTTCACCAAGAAATGTAAGCTTAG...AATCTGTAACACTTCTATGGAGACTGAAACAATCCATTTGAGAGGAAATCTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091879.12 |
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| CDS CAA 72 bp | ATGTGTATCCCTGAAGTTATCTTGGTAAAGTACACTTaGGGTGTATTCCTGGATGATTTTGCCATGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: MCIPEVILVKYT*GVFLDDFAMLI Trigger: TATGAGCATGGCAAAATCATCCAGGAATACACCCAAAGTGTACTTTACCAAGATAACTTCAGGGATACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074295.8 ENSMUST00000091879.12 |
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| CDS CAA 90 bp | TCTGTAAGGTTTCTTTCCACTATTGGTTTGTTTCAGCCCAAGTATTaGTTTAGAGTCAAAAACCTTATTAAGCACTGTCCCATTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVRFLSTIGLFQPKY*FRVKNLIKHCPIVF Trigger: GAACACAATGGGACAGTGCTTAATAAGGTTTTTGACTCTAAACAAATACTTGGGCTGAAACAAACCAATAGTGGAAAGAAACCTTACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074295.8 ENSMUST00000091879.12 |
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| CDS CAA 72 bp | GATAGTTACATGCTTGTGAACAATATGCTGTGTGTCTaGATCCAAGCCATTCTCATATTTAGGAAAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: DSYMLVNNMLCV*IQAILIFRKNA Trigger: TGCATTTTTCCTAAATATGAGAATGGCTTGGATCAAGACACACAGCATATTGTTCACAAGCATGTAACTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074295.8 ENSMUST00000091879.12 |
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