Pregenerated sensors for ZFP941 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060314Ensembl transcript IDs: ENSMUST00000080651.13, ENSMUST00000106052.2, ENSMUST00000150053.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTaGCTCTGTTTCCCAAGTCCTGGGATGAAAGGCGTATGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWTRTQKSA*LCFPSPGMKGVCHH Trigger: GTGGTGGCATACGCCTTTCATCCCAGGACTTGGGAAACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACAGAGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 90 bp | AAATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATGGTaGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGGCAGGCG | + |
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Preference number: 1 (lower is better) Translates to: KSFLPHLKLGIGHAW*HTLSIPELGRQRQA Trigger: CGCCTGCCTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 90 bp | TCCAAATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATaGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SKSFLPHLKLGIGHA*WHTLSIPELGRQRQ Trigger: CTGCCTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGATTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 90 bp | CTTCTTGGAAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTaGTACCATGACGGGATGCCTCTCACTTCTTCCCGAAAGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LLGRNASCPSLMKSL*YHDGMPLTSSRKAR Trigger: CCTTGCCTTTCGGGAAGAAGTGAGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR TCA 90 bp | AAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATaGCGGGATGCCTCTCACTTCTTCCCGAAAGGCAAGGATCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: KKRFMSFFDEKPLVP*RDASHFFPKGKDLE Trigger: TTCCAGATCCTTGCCTTTCGGGAAGAAGTGAGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR TCA 90 bp | ATTGGGACTAAAGATGAGGACTTCACAGAATCAAAATGGCATCTGTaGAGAACGGAGAGGAGACTGTCTTTCTTGTGGAATTCGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: IGTKDEDFTESKWHL*RTERRLSFLWNSGP Trigger: AGGTCCCGAATTCCACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGATTCTGTGAAGTCCTCATCTTTAGTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR CCA 90 bp | TTATTTTCCTTCAAGTTCACCCAGAACTCAGTAGAAAATACAGAATaGACTCAAAGACGACAGCCCAGAGCTGTAGTGTGCTCTAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LFSFKFTQNSVENTE*TQRRQPRAVVCSSP Trigger: TGGGCTAGAGCACACTACAGCTCTGGGCTGTCGTCTTTGAGTCCATTCTGTATTTTCTACTGAGTTCTGGGTGAACTTGAAGGAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR-3UTR CCA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGTTCTCTGTGTCGCCCTaGCTGTCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: HRPRMVAHAFNSRTREAEFSVSP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGCCAGGGCGACACAGAGAA...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGATGGTATTTGAGGCCTaGCCACCTGGAAAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HRPRMVAHAFNSRTREAEMVFEA*PPGKGF Trigger: AAAGCCTTTTCCAGGTGGTCAGGCCTCAAATACCAT...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCTTAAAGTGCCTGGAATTCGGGACCTTTaGAAAGCTAGGGTTAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: KGHGPSTPQICAHSLKVPGIRDL*KARVKP Trigger: AGGCTTAACCCTAGCTTTCCAAAGGTCCCGAATTCC...AGGCACTTTAAGAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR-3UTR CCA 90 bp | CTGATCTCTGGAAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCAGACTGTCTTTCTTGTaGAATTCGGGACCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LISGRAMAPVPHKSVPTLRLSFL*NSGPLE Trigger: TTCCAAAGGTCCCGAATTCCACAAGAAAGACAGTCT...GAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTTCCAGAGATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR CAA 90 bp | GGTTTAGTGGTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTaGCTTCCCGGCAACCAACTGGCTCTAAGAACTGCCTGTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: GLVVKNTLALAEDLG*LPGNQLALRTACNS Trigger: GGAGTTACAGGCAGTTCTTAGAGCCAGTTGGTTGCCGGGAAGCAAACCCAGGTCTTCTGCAAGAGCGAGTGTGTTCTTAACCACTAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATGGTGGCACACGCTATTATGAAGGCTTGCTaGTCCCAGTCAATGAACTCC | + |
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Preference number: 2 (lower is better) Translates to: ILSPTPKTGHRPRMVAHAIMKAC*SQSMNS Trigger: GGAGTTCATTGACTGGGACCAGCAAGCCTTCATAAT...AGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAACTCCAGGTTCATTGAGAAAGCTTATCTCAGAACTTGTGAGATGCCTGCCCACTGCCGGGGAATCTaGTGCCCTCTTCTGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: MNSRFIEKAYLRTCEMPAHCRGI*CPLLAS Trigger: AGAAGCCAGAAGAGGGCATCAGATTCCCCGGCAGTG...GGCAGGCATCTCACAAGTTCTGAGATAAGCTTTCTCAATGAACCTGGAGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGGAACTCCAGGTTCATTaGGAAAGCTTATCTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: HRPRMVAHAFNSRTREAEELQVH*ESLSQN Trigger: GTTCTGAGATAAGCTTTCTCAATGAACCTGGAGTTC...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAACTCCAGGTTCATTGAGAAAGCTTATCTCAGAACTTGTGAGATGCCTGCCTCTGATGCCCTCTTCTaGCTTCTGTGGGCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: MNSRFIEKAYLRTCEMPASDALF*LLWAVH Trigger: ATGCACTGCCCACAGAAGCCAGAAGAGGGCATCAGA...GGCAGGCATCTCACAAGTTCTGAGATAAGCTTTCTCAATGAACCTGGAGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAACTCCAGGTTCATTGAGAAAGCTTATCTCAGAACTTGTGAGATGCCTGCCGTGCAGTGTGAGGTGTaGACAGTGGTTGAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: MNSRFIEKAYLRTCEMPAVQCEV*TVVEGF Trigger: AAAGCCTTCAACCACTGTTCACACCTCACACTGCAC...GGCAGGCATCTCACAAGTTCTGAGATAAGCTTTCTCAATGAACCTGGAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGTTTAGTGGTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTTGCTTGGCGTATGCCACCACTaGCTGGCACTTAATGTAATT | + |
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Preference number: 2 (lower is better) Translates to: VGLVVKNTLALAEDLGLLGVCHH*LALNVI Trigger: AATTACATTAAGTGCCAGGCAGTGGTGGCATACGCC...AAGCAAACCCAGGTCTTCTGCAAGAGCGAGTGTGTTCTTAACCACTAAACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGAAGAAGGTAGAGCAATaGAGGAATTCAATATTAACC | + |
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Preference number: 2 (lower is better) Translates to: HRPRMVAHAFNSRTREAEKKVEQ*RNSILT Trigger: GGTTAATATTGAATTCCTCCATTGCTCTACCTTCTT...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAATCGCCCTGGCTGTCCTaGAACTCACTCTGTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: NIMKACWSQSMNSRFIEKSPWLS*NSLCRP Trigger: TGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCGA...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAACTCCAGGTTCATTGAGAAAGCTTATCTCAGAACTTGTGAGATGCCTGCCTGTGGGCAGTGCATGTaGTGCACAGACATTCATACA | + |
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Preference number: 2 (lower is better) Translates to: MNSRFIEKAYLRTCEMPACGQCM*CTDIHT Trigger: TGTATGAATGTCTGTGCATCACATGCACTGCCCACA...GGCAGGCATCTCACAAGTTCTGAGATAAGCTTTCTCAATGAACCTGGAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAAACTCAGAAATCCGCCTaGCTCTGTTTCCCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NIMKACWSQSMNSRFIEKTQKSA*LCFPSP Trigger: AGGACTTGGGAAACAGAGGCAGGCGGATTTCTGAGT...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTGGAAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATTGCAGTGTAAAGGTATaGGGGAGATGCTCCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLGRNASCPSLMKSLWYHCSVKV*GRCSPK Trigger: CTTTGGGGAGCATCTCCCGCATACCTTTACACTGCA...ATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATGACCGAAAGGCAAGGATCTaGAATACACTCATGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LGRNASCPSLMKSLWYHDRKARI*NTLMQC Trigger: ACACTGCATGAGTGTATTCCAGATCCTTGCCTTTCG...GTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR-3UTR GCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAACACACACACACAGCTTaGCATAGTCTTTGCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: NIMKACWSQSMNSRFIEKHTHTA*HSLCIR Trigger: CCTAATGCAAAGACTATGGCAAGCTGTGTGTGTGTG...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR GCA 72 bp | CCAGTACCCCACAAATCTGTGCCCACTCTCTTAAAGTaGCTGTCTGCTGACCCTCCCTCACATCCCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: PVPHKSVPTLLK*LSADPPSHPPH Trigger: GTGTGGGGGATGTGAGGGAGGGTCAGCAGACAGGCACTTTAAGAGAGTGGGCACAGATTTGTGGGGTACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR CCA 72 bp | AACTCAGAAATCCGCCTGCCTCTGTTTCCCAAGTCCTaGGATGAAAGGCGTATGCCACCACTGCCTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: NSEIRLPLFPKS*DERRMPPLPGT Trigger: AGTGCCAGGCAGTGGTGGCATACGCCTTTCATCCCAGGACTTGGGAAACAGAGGCAGGCGGATTTCTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CAA 90 bp | TCCACTGCCGGGGAATCTGATGCCCTCTTCTGGCTTCTGTGGGCAGTGCATGTGGTTCTGTTATGGTATTaGAGGCCTGACCACCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: STAGESDALFWLLWAVHVVLLWY*RPDHLE Trigger: TTCCAGGTGGTCAGGCCTCAAATACCATAACAGAAC...CACATGCACTGCCCACAGAAGCCAGAAGAGGGCATCAGATTCCCCGGCAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTaGCTCTGTTTCCCAAGTCCTGGGATGAAAGGCGTA | + |
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Preference number: 3 (lower is better) Translates to: CRPGWTRTQKSA*LCFPSPGMKGV Trigger: TACGCCTTTCATCCCAGGACTTGGGAAACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 72 bp | TTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATaGTGGCACACGCTTTCAATTCCAGAACTAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: FLPHLKLGIGHA*WHTLSIPELGR Trigger: CCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 72 bp | ACTGCCGGGGAATCTGATGCCCTCTTCTGGCTTCTGTaGGCAGTGCATGTGATGCACAGACATTCATACATT | + |
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Preference number: 3 (lower is better) Translates to: TAGESDALFWLL*AVHVMHRHSYI Trigger: AATGTATGAATGTCTGTGCATCACATGCACTGCCCACAGAAGCCAGAAGAGGGCATCAGATTCCCCGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 72 bp | GGGATGCCTCTCACTTCTTCCCGAAAGGCAAGGATCTaGAATACACTCATGCAGTGTAAAGGTATGCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GMPLTSSRKARI*NTLMQCKGMRE Trigger: CTCCCGCATACCTTTACACTGCATGAGTGTATTCCAGATCCTTGCCTTTCGGGAAGAAGTGAGAGGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR TCA 72 bp | GATCTCTGTGATTCAAGGCCAACCTGGTCTACATGGTaGGTCCTAGGACACCCAGAGTTACAGAAAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: DLCDSRPTWSTW*VLGHPELQKTC Trigger: ACAGGTTTTCTGTAACTCTGGGTGTCCTAGGACTCACCATGTAGACCAGGTTGGCCTTGAATCACAGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR CCA 72 bp | CCCTGCCTTCTGTACTTCTCTCACAGAACTGAGCACTaGCAAAGTATACTGAGAACCAAGGGCAGTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: PCLLYFSHRTEH*QSILRTKGSSF Trigger: GAATGAACTGCCCTTGGTTCTCAGTATACTTTGCCAGTGCTCAGTTCTGTGAGAGAAGTACAGAAGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR TCA 72 bp | TTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATaGCGGGATGCCTCTCACTTCTTCCCGAAAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: FMSFFDEKPLVP*RDASHFFPKGK Trigger: CTTGCCTTTCGGGAAGAAGTGAGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR CCA 72 bp | AGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTaGTACCATGACGGGATGCCTCTCACTTCTTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: RNASCPSLMKSL*YHDGMPLTSSR Trigger: TCGGGAAGAAGTGAGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
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| 3UTR GCA 72 bp | TCTTCTGGTCTCCGCAGAGTATCGATCAGGCACACATaGAATGTACAGATATGCGTACAAACAAAACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SSGLRRVSIRHT*NVQICVQTKPP Trigger: TGGAGGTTTTGTTTGTACGCATATCTGTACATTGCATGTGTGCCTGATCGATACTCTGCGGAGACCAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR-3UTR CAA 90 bp | GACAGCAGATGCTATTCAAATATAAATCCCAAATCCAAATCCTTTCTCCCACACAGAACACACTCGCTCTaGCAGAAGACCTGGGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: DSRCYSNINPKSKSFLPHRTHSL*QKTWVC Trigger: GCAAACCCAGGTCTTCTGCAAGAGCGAGTGTGTTCT...GTGTGGGAGAAAGGATTTGGATTTGGGATTTATATTTGAATAGCATCTGCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| 3UTR TCA 72 bp | ACTTCTCTCACAGAACTGAGCACTGGCAAAGTATACTaGGAACCAAGGGCAGTTCATTCAATCCTCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: TSLTELSTGKVY*EPRAVHSILLA Trigger: TGCTAAGAGGATTGAATGAACTGCCCTTGGTTCTCAGTATACTTTGCCAGTGCTCAGTTCTGTGAGAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR TCA 72 bp | AAAGATGAGGACTTCACAGAATCAAAATGGCATCTGTaGAGAACGGAGAGGAGACTGTCTTTCTTGTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: KDEDFTESKWHL*RTERRLSFLWN Trigger: ATTCCACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGATTCTGTGAAGTCCTCATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR-3UTR CAA 90 bp | TCCAACTCTTTATTTTCCTTCAAGTTCACCCAGAACTCAGTAGAAAATACAGAAAGGAGACTGTCTTTCTaGTGGAATTCGGGACCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SNSLFSFKFTQNSVENTERRLSF*WNSGPL Trigger: CAAAGGTCCCGAATTCCACAAGAAAGACAGTCTCCT...TTCTGTATTTTCTACTGAGTTCTGGGTGAACTTGAAGGAAAATAAAGAGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| CDS-3UTR TCA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGGCTTTGCAATCTGCGTaGAGGCTTTCTCGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRPRMVAHAFNSRTREAEALQSA*RLSRTL Trigger: AAGAGTGCGAGAAAGCCTTCACGCAGATTGCAAAGC...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCTTTCTTGTGGAATTCGGGACCTTTGGAAAGCTAGGGTTAAGCCTCTGGCTTGCACACGCTCTCTaGTCCCCTCTTCGCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TVFLVEFGTFGKLGLSLWLAHAL*SPLRVP Trigger: TGGGACGCGAAGAGGGGAGCAGAGAGCGTGTGCAAG...CCAGAGGCTTAACCCTAGCTTTCCAAAGGTCCCGAATTCCACAAGAAAGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| CDS-3UTR GCA 90 bp | GATCTCTGGAAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCTTGTAAGCTTTGCAATCTaGGTGAAGGCTTTCTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: DLWKGHGPSTPQICAHSLVSFAI*VKAFSH Trigger: GTGCGAGAAAGCCTTCACGCAGATTGCAAAGCTTAC...AAGAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTTCCAGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| CDS-3UTR CCA 90 bp | CTGATCTCTGGAAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCTTACAGGAGGATTCATaGCAAAGGCTTTGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: LISGRAMAPVPHKSVPTLLQEDS*QRLCHT Trigger: AGTGTGGCAAAGCCTTTGCCATGAATCCTCCTGTAA...GAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTTCCAGAGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| 3UTR CAA 72 bp | GTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTaGCTTCCCGGCAACCAACTGGCTCTAAGAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: VKNTLALAEDLG*LPGNQLALRTA Trigger: GGCAGTTCTTAGAGCCAGTTGGTTGCCGGGAAGCAAACCCAGGTCTTCTGCAAGAGCGAGTGTGTTCTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATGGTGGCACACGCTGGAATGTTTGCTGACTaGAAGGTGGGGCTCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ILSPTPKTGHRPRMVAHAGMFAD*KVGLFL Trigger: CAAAAAGAGCCCCACCTTTCAGTCAGCAAACATTCC...AGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
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| CDS-3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTGTAAGCTTTGCAATCTaGGTGAAGGCTTTCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLCRPGWTRTQKSACLCVSFAI*VKAFSH Trigger: GTGCGAGAAAGCCTTCACGCAGATTGCAAAGCTTAC...ACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACAGAGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCCCCACACTCTCTCACTTTAAGTGTCAGGAGACAGATGGAACGCATAGGCGATATTTCCTGTCCTTaGTCTCTGTTGGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TPPHSLTLSVRRQMERIGDISCP*SLLAET Trigger: TGTCTCTGCCAACAGAGATCAAGGACAGGAAATATC...GCCTATGCGTTCCATCTGTCTCCTGACACTTAAAGTGAGAGAGTGTGGGGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR TCA 90 bp | AACGGAGAGGAGACTGTCTTTCTTGTGGAATTCGGGACCTTTGGAAAGCTAGGGGGAATGTTTGCTGACTaGAAGGTGGGGCTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGEETVFLVEFGTFGKLGGMFAD*KVGLFL Trigger: CAAAAAGAGCCCCACCTTTCAGTCAGCAAACATTCC...CCCTAGCTTTCCAAAGGTCCCGAATTCCACAAGAAAGACAGTCTCCTCTCCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CCA 90 bp | ACGCATAGGCCCTGCCTTCTGTACTTCTCTCACAGAACTGAGCACTGGCAAAGTTTGATGAAAAGCCTTTaGTACCATGACGGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: THRPCLLYFSHRTEHWQSLMKSL*YHDGMP Trigger: AGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAA...ACTTTGCCAGTGCTCAGTTCTGTGAGAGAAGTACAGAAGGCAGGGCCTATGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CCA 90 bp | AACTCACTCTGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTTCAGACTTACATTCATaGCAAAGGCTTTGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: NSLCRPGWTRTQKSACLCSDLHS*QRLCHT Trigger: AGTGTGGCAAAGCCTTTGCCATGAATGTAAGTCTGA...ACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACAGAGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATGACGGGATGTTGGTGGTACACCTCTaGGGAAAGCTGTTCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RNASCPSLMKSLWYHDGMLVVHL*GKLFSP Trigger: GGGTGAGAACAGCTTTCCTCAGAGGTGTACCACCAA...CATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150053.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGACTAAAGATGAGGACTTCACAGAATCAAAATGGCATCTGTGAAGAACGGGGTACCATGACGGGATaGCTCCACAGACAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLKMRTSQNQNGICEERGTMTG*LHRQQV Trigger: AACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACC...CCGTTCTTCACAGATGCCATTTTGATTCTGTGAAGTCCTCATCTTTAGTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR GCA 90 bp | GTAAAAAGTCCTCGGACTGCTAGCCTGATCTCTGGAAGGGCCATGGCCCCAGTAAAGAGTTCAGTCCAGTaGTCCTTTTTAAATCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSPRTASLISGRAMAPVKSSVQ*SFLNRS Trigger: TGATCGATTTAAAAAGGAGCACTGGACTGAACTCTT...TACTGGGGCCATGGCCCTTCCAGAGATCAGGCTAGCAGTCCGAGGACTTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CCA 90 bp | ACGCATAGGCCCTGCCTTCTGTACTTCTCTCACAGAACTGAGCACTGGCAAAGTCTCCTTAACTCTTCTTaGAAGAAACGCTTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: THRPCLLYFSHRTEHWQSLLNSS*KKRFMS Trigger: GGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAG...ACTTTGCCAGTGCTCAGTTCTGTGAGAGAAGTACAGAAGGCAGGGCCTATGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR TCA 90 bp | AACTCACTCTGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTTGGACGTTTTGGTGTTaGGTAAGCTTTGAAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLCRPGWTRTQKSACLCWTFWC*VSFEIS Trigger: TGATATTTCAAAGCTTACTCAACACCAAAACGTCCA...ACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACAGAGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR GCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAAGGTACCATGACGGGATaGCTCCACAGACAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NIMKACWSQSMNSRFIEKGTMTG*LHRQQV Trigger: AACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACC...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CCA 90 bp | ACGCATAGGCCCTGCCTTCTGTACTTCTCTCACAGAACTGAGCACTGGCAAAGTAGTTTCAAATGTGGCTaGGAATGTTTGCTGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: THRPCLLYFSHRTEHWQSSFKCG*ECLLTE Trigger: TTCAGTCAGCAAACATTCCCAGCCACATTTGAAACT...ACTTTGCCAGTGCTCAGTTCTGTGAGAGAAGTACAGAAGGCAGGGCCTATGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| 3UTR CAA 72 bp | AACTGTTGCCACAGGACAGGAGAAATGACTAATCAGTaGGCAGCCAGCAACCAAATAGCAGCTGATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCCHRTGEMTNQ*AASNQIAADSC Trigger: ACAGCTATCAGCTGCTATTTGGTTGCTGGCTGCCAACTGATTAGTCATTTCTCCTGTCCTGTGGCAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTTTAGTGGTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTTGCTTGATATTTCCTGTCCTTaGTCTCTGTTGGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VGLVVKNTLALAEDLGLLDISCP*SLLAET Trigger: TGTCTCTGCCAACAGAGATCAAGGACAGGAAATATC...AAGCAAACCCAGGTCTTCTGCAAGAGCGAGTGTGTTCTTAACCACTAAACCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAATGGCATCTGTGAAGAACGGAGAGGAGACTGTCTTTCTTGTGGAATTCGCTTTGCAATCTGCGTaGAGGCTTTCTCGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKMASVKNGEETVFLVEFALQSA*RLSRTL Trigger: AAGAGTGCGAGAAAGCCTTCACGCAGATTGCAAAGC...GAATTCCACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAATTGATGAAAAGCCTTTaGTACCATGACGGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIMKACWSQSMNSRFIEKLMKSL*YHDGMP Trigger: AGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAA...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAATGGCATCTGTGAAGAACGGAGAGGAGACTGTCTTTCTTGTGGAATTCAGGAGATCTGATTTTTaGCGAAAAGTCAGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: IKMASVKNGEETVFLVEFRRSDF*RKVRTH Trigger: ATGTGTCCTGACTTTTCGTCAAAAATCAGATCTCCT...GAATTCCACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CCA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAACTCCTTAACTCTTCTTaGAAGAAACGCTTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIMKACWSQSMNSRFIEKLLNSS*KKRFMS Trigger: GGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAG...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAATGGCATCTGTGAAGAACGGAGAGGAGACTGTCTTTCTTGTGGAATTCTGGACGTTTTGGTGTTaGGTAAGCTTTGAAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: IKMASVKNGEETVFLVEFWTFWC*VSFEIS Trigger: TGATATTTCAAAGCTTACTCAACACCAAAACGTCCA...GAATTCCACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR GCA 90 bp | GACAGCAGATGCTATTCAAATATAAATCCCAAATCCAAATCCTTTCTCCCACACAAGAGTTCAGTCCAGTaGTCCTTTTTAAATCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DSRCYSNINPKSKSFLPHKSSVQ*SFLNRS Trigger: TGATCGATTTAAAAAGGAGCACTGGACTGAACTCTT...GTGTGGGAGAAAGGATTTGGATTTGGGATTTATATTTGAATAGCATCTGCTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCTCTGGAAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCAAGGTGGGGCTCTTTTaGAGTCACTGCCACGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: LISGRAMAPVPHKSVPTLKVGLF*SHCHDG Trigger: CCCGTCGTGGCAGTGACTCAAAAAGAGCCCCACCTT...GAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTTCCAGAGATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATGGTGGCACACGCTAAGGTGGGGCTCTTTTaGAGTCACTGCCACGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILSPTPKTGHRPRMVAHAKVGLF*SHCHDG Trigger: CCCGTCGTGGCAGTGACTCAAAAAGAGCCCCACCTT...AGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | TCCACTGCCGGGGAATCTGATGCCCTCTTCTGGCTTCTGTGGGCAGTGCATGTGCCACCGCTGAAGTTTTaGTGTGTCTTCGTACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: STAGESDALFWLLWAVHVPPLKF*CVFVHS Trigger: TGAATGTACGAAGACACACAAAAACTTCAGCGGTGG...CACATGCACTGCCCACAGAAGCCAGAAGAGGGCATCAGATTCCCCGGCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTCTCCCACACCTAAAACTGGGCATAGGCCACGCATGGTGGCACACGCTCTTGTAAGCCTCATCTaGAAGGTGGGAACTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSPTPKTGHRPRMVAHALVSLI*KVGTLK Trigger: CTTCAGAGTTCCCACCTTCAAGATGAGGCTTACAAG...AGCGTGTGCCACCATGCGTGGCCTATGCCCAGTTTTAGGTGTGGGAGAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCTTAAAGTGCCTCCACCGCTGAAGTTTTaGTGTGTCTTCGTACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGHGPSTPQICAHSLKVPPPLKF*CVFVHS Trigger: TGAATGTACGAAGACACACAAAAACTTCAGCGGTGG...AGGCACTTTAAGAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CAA 90 bp | CTGATCTCTGGAAGGGCCATGGCCCCAGTACCCCACAAATCTGTGCCCACTCTCCCCTTCTTAAAGTTTTaGCCACACTCTTCACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LISGRAMAPVPHKSVPTLPFLKF*PHSSQI Trigger: TATCTGTGAAGAGTGTGGCAAAAACTTTAAGAAGGG...GAGAGTGGGCACAGATTTGTGGGGTACTGGGGCCATGGCCCTTCCAGAGATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS TCA 90 bp | CAGAGGAAAGGTAAGTTTCAAATGTGGCTGGGAATGTTTGCTGACTaGAAGGTGGGGCTCTTTTTGAGTCACTGCCACGACGGGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QRKGKFQMWLGMFAD*KVGLFLSHCHDGRP Trigger: AGGTCTCCCGTCGTGGCAGTGACTCAAAAAGAGCCCCACCTTTCAGTCAGCAAACATTCCCAGCCACATTTGAAACTTACCTTTCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS TCA 90 bp | TCGCTCCAGGACGAATGCTATGGCAACGTCTGCTGGTGGAACACTTaGCAAAGGATCTACCACATTCTCCAGCGTAAATTCTCTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQDECYGNVCWWNT*QRIYHILQRKFSGA Trigger: AGCACCAGAGAATTTACGCTGGAGAATGTGGTAGATCCTTTGTCAAGTGTTCCACCAGCAGACGTTGCCATAGCATTCGTCCTGGAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | CATAGGCCACGCATGGTGGCACACGCTTTCAATTCCAGAACTAGGGAGGCAGAGCCCTTCTTAAAGTTTTaGCCACACTCTTCACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: HRPRMVAHAFNSRTREAEPFLKF*PHSSQI Trigger: TATCTGTGAAGAGTGTGGCAAAAACTTTAAGAAGGG...CTCTGCCTCCCTAGTTCTGGAATTGAAAGCGTGTGCCACCATGCGTGGCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS TCA 90 bp | AAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATaGCGGGATGCCTCCACAGACAGCAGGTTTCTGCAATTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KKRFMSFFDEKPLVP*RDASTDSRFLQFST Trigger: GGTGGAGAATTGCAGAAACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS TCA 90 bp | TCTCCCACTGTTTCCTCGGATGGAAAATGTCAGCGCCACACTTGCTaGGTCTTCTCCTTAACTCTTCTTGGAAGAAACGCTTCATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPTVSSDGKCQRHTC*VFSLTLLGRNASCP Trigger: AGGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGACTCAGCAAGTGTGGCGCTGACATTTTCCATCCGAGGAAACAGTGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | GAACGGAGAGGAGACTGTCTTTCTTGTGGAATTCGGGACCTTTGGAAAGCTAGGAGATATTTCCTGTCCTaGATCTCTGTTGGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ERRGDCLSCGIRDLWKARRYFLS*ISVGRD Trigger: GTCTCTGCCAACAGAGATCAAGGACAGGAAATATCT...CCTAGCTTTCCAAAGGTCCCGAATTCCACAAGAAAGACAGTCTCCTCTCCGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS CCA 90 bp | CTTCTTGGAAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTaGTACCATGACGGGATGCCTCCACAGACAGCAGGTTTCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGRNASCPSLMKSL*YHDGMPPQTAGFCN Trigger: ATTGCAGAAACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | AACTCACTCTGTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTTTTGACACAAGTTGTTaGTTTACTACAAAGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLCRPGWTRTQKSACLCFDTSC*FTTKRW Trigger: CCATCGCTTTGTAGTAAACAAACAACTTGTGTCAAA...ACAGAGGCAGGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTACAGAGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | CACTGCCCATTGGGACTAAAGATGAGGACTTCACAGAATCAAAATGGCATCTGTCTTGTAAGCCTCATCTaGAAGGTGGGAACTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCPLGLKMRTSQNQNGICLVSLI*KVGTLK Trigger: CTTCAGAGTTCCCACCTTCAAGATGAGGCTTACAAG...ACAGATGCCATTTTGATTCTGTGAAGTCCTCATCTTTAGTCCCAATGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS-3UTR CAA 90 bp | GTCCAACTCTTTATTTTCCTTCAAGTTCACCCAGAACTCAGTAGAAAATACAGATGTGGCTGGGAATGTTaGCTGACTGAAAGGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQLFIFLQVHPELSRKYRCGWEC*LTERWG Trigger: GCCCCACCTTTCAGTCAGCAAACATTCCCAGCCACA...TCTGTATTTTCTACTGAGTTCTGGGTGAACTTGAAGGAAAATAAAGAGTTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS CCA 90 bp | AAAATGTCAGCGCCACACTTGCTGAGTCTTCTCCTTAACTCTTCTTaGAAGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KMSAPHLLSLLLNSS*KKRFMSFFDEKPLV Trigger: TACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGACTCAGCAAGTGTGGCGCTGACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | AATATTATGAAGGCTTGCTGGTCCCAGTCAATGAACTCCAGGTTCATTGAGAAAAGATATTTCCTGTCCTaGATCTCTGTTGGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NIMKACWSQSMNSRFIEKRYFLS*ISVGRD Trigger: GTCTCTGCCAACAGAGATCAAGGACAGGAAATATCT...TTTCTCAATGAACCTGGAGTTCATTGACTGGGACCAGCAAGCCTTCATAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106052.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAATCAAAATGGCATCTGTGAAGAACGGAGAGGAGACTGTCTTTCTTGTGTTTGACACAAGTTGTTaGTTTACTACAAAGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: HRIKMASVKNGEETVFLVFDTSC*FTTKRW Trigger: CCATCGCTTTGTAGTAAACAAACAACTTGTGTCAAA...CACAAGAAAGACAGTCTCCTCTCCGTTCTTCACAGATGCCATTTTGATTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
||
| CDS GCA 72 bp | GGATACCGCTCTGGCGAACGGTCTGAGAAGTCTCCTTaGACACGCTCTCTGCTCCCCTCTTCGCGTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GYRSGERSEKSP*TRSLLPSSRPK Trigger: TTTGGGACGCGAAGAGGGGAGCAGAGAGCGTGTGCAAGGAGACTTCTCAGACCGTTCGCCAGAGCGGTATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS TCA 72 bp | TGGGAGTTATTCAGGATACCGCTCTGGCGAACGGTCTaGGAAGTCTCCTTGCACACGCTCTCTGCTCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WELFRIPLWRTV*EVSLHTLSAPL Trigger: GAGGGGAGCAGAGAGCGTGTGCAAGGAGACTTCTCAGACCGTTCGCCAGAGCGGTATCCTGAATAACTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS GCA 72 bp | GCGAACGGTCTGAGAAGTCTCCTTGCACACGCTCTCTaGTCCCCTCTTCGCGTCCCAAATCGTTGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ANGLRSLLAHAL*SPLRVPNRCAF Trigger: AAAGGCACAACGATTTGGGACGCGAAGAGGGGAGCAGAGAGCGTGTGCAAGGAGACTTCTCAGACCGTTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS CAA 90 bp | AGTCACTGCCACGACGGGAGACCTTTTCTGAGATATTTCCTGTCCTaGATCTCTGTTGGCAGAGACACTTTTCTCTGTACCACTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHCHDGRPFLRYFLS*ISVGRDTFLCTTVS Trigger: GCTGACAGTGGTACAGAGAAAAGTGTCTCTGCCAACAGAGATCAAGGACAGGAAATATCTCAGAAAAGGTCTCCCGTCGTGGCAGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS TCA 72 bp | GGTAAGTTTCAAATGTGGCTGGGAATGTTTGCTGACTaGAAGGTGGGGCTCTTTTTGAGTCACTGCCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: GKFQMWLGMFAD*KVGLFLSHCHD Trigger: GTCGTGGCAGTGACTCAAAAAGAGCCCCACCTTTCAGTCAGCAAACATTCCCAGCCACATTTGAAACTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS CCA 72 bp | AGAAACGCTTCATGTCCTTCTTTGATGAAAAGCCTTTaGTACCATGACGGGATGCCTCCACAGACAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNASCPSLMKSL*YHDGMPPQTAG Trigger: ACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
||
| CDS CAA 90 bp | TCACTCTCCCACTGTTTCCTCGGATGGAAAATGTCAGCGCCACACTaGCTGAGTCTTCTCCTTAACTCTTCTTGGAAGAAACGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SLSHCFLGWKMSAPH*LSLLLNSSWKKRFM Trigger: CATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGACTCAGCAAGTGTGGCGCTGACATTTTCCATCCGAGGAAACAGTGGGAGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS TCA 72 bp | TTCATGTCCTTCTTTGATGAAAAGCCTTTGGTACCATaGCGGGATGCCTCCACAGACAGCAGGTTTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FMSFFDEKPLVP*RDASTDSRFLQ Trigger: TTGCAGAAACCTGCTGTCTGTGGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS TCA 72 bp | GTTTCCTCGGATGGAAAATGTCAGCGCCACACTTGCTaGGTCTTCTCCTTAACTCTTCTTGGAAGAAACGCT | + |
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Preference number: 6 (lower is better) Translates to: VSSDGKCQRHTC*VFSLTLLGRNA Trigger: AGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGACTCAGCAAGTGTGGCGCTGACATTTTCCATCCGAGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS CAA 72 bp | CACGACGGGAGACCTTTTCTGAGATATTTCCTGTCCTaGATCTCTGTTGGCAGAGACACTTTTCTCTGTACC | + |
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Preference number: 6 (lower is better) Translates to: HDGRPFLRYFLS*ISVGRDTFLCT Trigger: GGTACAGAGAAAAGTGTCTCTGCCAACAGAGATCAAGGACAGGAAATATCTCAGAAAAGGTCTCCCGTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS CAA 90 bp | GTCTTCTCCTTAACTCTTCTTGGAAGAAACGCTTCATGTCCTTCTTaGATGAAAAGCCTTTGGTACCATGACGGGATGCCTCCACAGACA | + |
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Preference number: 6 (lower is better) Translates to: VFSLTLLGRNASCPS*MKSLWYHDGMPPQT Trigger: TGTCTGTGGAGGCATCCCGTCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS CAA 72 bp | CACTGTTTCCTCGGATGGAAAATGTCAGCGCCACACTaGCTGAGTCTTCTCCTTAACTCTTCTTGGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HCFLGWKMSAPH*LSLLLNSSWKK Trigger: TTTCTTCCAAGAAGAGTTAAGGAGAAGACTCAGCAAGTGTGGCGCTGACATTTTCCATCCGAGGAAACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS CAA 72 bp | TTATCCCACACAGACTTCAGGAAGATGAGGTCTCCATaGTTTCCTCGGATTACAGGAGGATTCATGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSHTDFRKMRSP*FPRITGGFMAK Trigger: CTTTGCCATGAATCCTCCTGTAATCCGAGGAAACAATGGAGACCTCATCTTCCTGAAGTCTGTGTGGGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080651.13 |
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| CDS CAA 72 bp | AAGAGTGAGGGACGAGAAAGTTTCTGCCCACGTTCATaGACACTGTGTAGTTTGACACAAGTTGTTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: KSEGRESFCPRS*TLCSLTQVVCL Trigger: TAAACAAACAACTTGTGTCAAACTACACAGTGTCAATGAACGTGGGCAGAAACTTTCTCGTCCCTCACTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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| CDS CAA 90 bp | TTTTTATTTAAGAGTGAGGGACGAGAAAGTTTCTGCCCACGTTCATaGACACTGTGTAGTTTGACACAAGTTGTTTGTTTACTACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FLFKSEGRESFCPRS*TLCSLTQVVCLLQS Trigger: GCTTTGTAGTAAACAAACAACTTGTGTCAAACTACACAGTGTCAATGAACGTGGGCAGAAACTTTCTCGTCCCTCACTCTTAAATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080651.13 ENSMUST00000106052.2 |
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