Pregenerated sensors for ZFP94 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074282Ensembl transcript IDs: ENSMUST00000032673.15, ENSMUST00000108436.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAACAACGCCGACCCTGAGCAGAGAGGCTGGGCCCTGTGTGTGGTaGTGGTGTGTTCTGAGGAAGGCTGCAGTGAAGTCACACAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: TTTPTLSREAGPCVW*WCVLRKAAVKSHSC Trigger: GCAACTGTGTGACTTCACTGCAGCCTTCCTCAGAACACACCATCACCACACACAGGGCCCAGCCTCTCTGCTCAGGGTCGGCGTTGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CCA 90 bp | ATGCAATTTGTCATAGACAACAACGCCGACCCTGAGCAGAGAGGCTaGGCCCTGTGTGTGGTGATGGTGTGTTCTGAGGAAGGCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: MQFVIDNNADPEQRG*ALCVVMVCSEEGCS Trigger: ACTGCAGCCTTCCTCAGAACACACCATCACCACACACAGGGCCCAGCCTCTCTGCTCAGGGTCGGCGTTGTTGTCTATGACAAATTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR TCA 90 bp | CCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACTaGAGTCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: PGWLLSPCVKGQGSD*SLHGSNLQGFSACG Trigger: ACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTTCAGTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CCA 90 bp | ACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATCAAAATGCATCCTaGTCCAGTCAAAATACTAATACTACAACTCCCTTGAGAACTCTA | + |
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Preference number: 1 (lower is better) Translates to: TRLLCLWSPKHQNAS*SSQNTNTTTPLRTL Trigger: TAGAGTTCTCAAGGGAGTTGTAGTATTAGTATTTTGACTGGACCAGGATGCATTTTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CAA 90 bp | CGGGGTTGCAACCAGCAACATAAGAAAGTGATCTGGTTCCTTCCTTaGAGATACCTCCAGGTCACACTCAACTTTCCCCCGGTTGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RGCNQQHKKVIWFLP*RYLQVTLNFPPVGY Trigger: GTAACCAACCGGGGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTTCTTATGTTGCTGGTTGCAACCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCTGCAGTGAAGTCACACAGTTGCATCATGGGTAAGAGCTGCCAGAAGCAACTTTCCCCCGGTTaGTTACTGTCTCCATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: RKAAVKSHSCIMGKSCQKQLSPG*LLSPCV Trigger: AACACATGGAGACAGTAACCAACCGGGGGAAAGTTG...CTTCTGGCAGCTCTTACCCATGATGCAACTGTGTGACTTCACTGCAGCCTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGCATCTGGTTCCTTCCTTTaGGATACCTCCAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: PKYLVTVTYGNEAPHGVASGSFL*DTSRSH Trigger: GTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGA...TGCAACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR TCA 90 bp | AACGCTTCCGGAAGAACAGAAAGCATGTGTACTGTAGAAAGCCATGCAATTTGTGGGCCCTGTGTGTGGTaGTGGTGTGTTCTGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NASGRTESMCTVESHAICGPCVW*WCVLRK Trigger: CTTCCTCAGAACACACCATCACCACACACAGGGCCC...ACAAATTGCATGGCTTTCTACAGTACACATGCTTTCTGTTCTTCCGGAAGCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACAGAGTCTGCAGCTGAACTAGAAGACCGAGAACAGGAAAGCTCCGTGAGCGAGAACTCTAAGAGTTaGGACCTTTCAGCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TTESAAELEDREQESSVSENSKS*DLSASS Trigger: ACTGGAAGCTGAAAGGTCCCAACTCTTAGAGTTCTC...GCTCACGGAGCTTTCCTGTTCTCGGTCTTCTAGTTCAGCTGCAGACTCTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGCAGAGAACTCTAAGAGTTaGGACCTTTCAGCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PKYLVTVTYGNEAPHGVAENSKS*DLSASS Trigger: ACTGGAAGCTGAAAGGTCCCAACTCTTAGAGTTCTC...TGCAACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAATTTATTAACCACAAAACCTAACTTGCACAGTAGTGCCGTGGAACACTTTTCTGGTTCCTTCCTTTaGGATACCTCCAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GNLLTTKPNLHSSAVEHFSGSFL*DTSRSH Trigger: GTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGA...AAAGTGTTCCACGGCACTACTGTGCAAGTTAGGTTTTGTGGTTAATAAATTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCTGTAAAGGGGAGTAATGAGGATGGTCAAAATCCCACTGAGACACACTTTGGTCCCTGGATATaGAGAAAGCTTGTAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: TLSVKGSNEDGQNPTETHFGPWI*RKLVVF Trigger: GAACACTACAAGCTTTCTGCATATCCAGGGACCAAA...GTGTGTCTCAGTGGGATTTTGACCATCCTCATTACTCCCCTTTACAGAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAATTTATTAACCACAAAACCTAACTTGCACAGTAGTGCCGTGGAACACTTTCACACAGTTGCATCATaGGTAAGAGCTGCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GNLLTTKPNLHSSAVEHFHTVAS*VRAARS Trigger: GCTTCTGGCAGCTCTTACCCATGATGCAACTGTGTG...AAAGTGTTCCACGGCACTACTGTGCAAGTTAGGTTTTGTGGTTAATAAATTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCCATCAAAATGCATCCTaGTCCAGTCAAAATACTAAT | + |
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Preference number: 2 (lower is better) Translates to: KVIWFLPLRYLQVTLNFPHQNAS*SSQNTN Trigger: ATTAGTATTTTGACTGGACCAGGATGCATTTTGATG...GGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CCA 90 bp | AACGCTTCCGGAAGAACAGAAAGCATGTGTACTGTAGAAAGCCATGCAATTTGTCATCAAAATGCATCCTaGTCCAGTCAAAATACTAAT | + |
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Preference number: 2 (lower is better) Translates to: NASGRTESMCTVESHAICHQNAS*SSQNTN Trigger: ATTAGTATTTTGACTGGACCAGGATGCATTTTGATG...ACAAATTGCATGGCTTTCTACAGTACACATGCTTTCTGTTCTTCCGGAAGCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CCA 72 bp | GTCATAGACAACAACGCCGACCCTGAGCAGAGAGGCTaGGCCCTGTGTGTGGTGATGGTGTGTTCTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VIDNNADPEQRG*ALCVVMVCSEE Trigger: TTCCTCAGAACACACCATCACCACACACAGGGCCCAGCCTCTCTGCTCAGGGTCGGCGTTGTTGTCTATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR TCA 72 bp | AGCCATGCAATTTGTCATAGACAACAACGCCGACCCTaGGCAGAGAGGCTGGGCCCTGTGTGTGGTGATGGT | + |
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Preference number: 3 (lower is better) Translates to: SHAICHRQQRRP*AERLGPVCGDG Trigger: ACCATCACCACACACAGGGCCCAGCCTCTCTGCTCAGGGTCGGCGTTGTTGTCTATGACAAATTGCATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR-3UTR CAA 90 bp | ACACTCAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTACAAGGCTTCTCTGCTaGTGGTCTCCCAAGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: TLNFPPVGYCLHVLKVKVTRLLC*WSPKHQ Trigger: TTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGT...AACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTGAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR TCA 72 bp | ATATGCAGAAAGCTTGTAGTGTTCCTAAATATCTTGTaGCTGTCACTTACGGTAATGAAGCCCCACACGGGG | + |
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Preference number: 3 (lower is better) Translates to: ICRKLVVFLNIL*LSLTVMKPHTG Trigger: CCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAACACTACAAGCTTTCTGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR TCA 72 bp | TTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACTaGAGTCTACATGGCTCCAACTTACAAGGCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LLSPCVKGQGSD*SLHGSNLQGFS Trigger: AGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTTCAGTCAGAACCTTGACCTTTAACACATGGAGACAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | ACAACAGAGTCTGCAGCTGAACTAGAAGACCGAGAACAGGAAAGCTCCGTGAGCGGGTGGAGGCCCGAGTaGAGCCCTTGCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TTESAAELEDREQESSVSGWRPE*SPCHTP Trigger: AGGAGTGTGGCAAGGGCTTCACTCGGGCCTCCACCC...GCTCACGGAGCTTTCCTGTTCTCGGTCTTCTAGTTCAGCTGCAGACTCTGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | AAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCGGGTGGAGGCCCGAGTaGAGCCCTTGCCACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KVIWFLPLRYLQVTLNFPGWRPE*SPCHTP Trigger: AGGAGTGTGGCAAGGGCTTCACTCGGGCCTCCACCC...GGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCCCGGTTGGTTACTGGAGCGCTGGTGCGCTTaGAGGTGTGACTCTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSFEIPPGHTQLSPGWLLERWCA*RCDSTV Trigger: CACTGTAGAGTCACACCTTCAAGCGCACCAGCGCTC...CAGTAACCAACCGGGGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | ACAACAGAGTCTGCAGCTGAACTAGAAGACCGAGAACAGGAAAGCTCCGTGAGCGTGTGGACTCCACGATaGGCCAGAAAGTTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTESAAELEDREQESSVSVWTPR*ARKLEA Trigger: GGCCTCCAACTTTCTGGCTCATCGTGGAGTCCACAC...GCTCACGGAGCTTTCCTGTTCTCGGTCTTCTAGTTCAGCTGCAGACTCTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTCCAGTGTGGCCTCTCTaGTGGGCCAGGAGATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPKYLVTVTYGNEAPHGVPVWPL*WARRWE Trigger: CTCCCATCTCCTGGCCCATCAGAGAGGCCACACTGG...AACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | TCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATCAAGGTCGCCCGTTAGCCTaGAGAGGAGAGTCCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: STWLQLTRLLCLWSPKHQGRPLA*RGESQE Trigger: CTCTTGGGACTCTCCTCTGCAGGCTAACGGGCGACC...TTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | ACAACAGAGTCTGCAGCTGAACTAGAAGACCGAGAACAGGAAAGCTCCGTGAGCTCACTGTGGACCCTCTaGTGCACCTGGAGTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: TTESAAELEDREQESSVSSLWTL*CTWSME Trigger: CTCCATACTCCAGGTGCACCAGAGGGTCCACAGTGA...GCTCACGGAGCTTTCCTGTTCTCGGTCTTCTAGTTCAGCTGCAGACTCTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | GTGTTAAAGGTCAAGGTTCTGACTGAAGTCTACATGGCTCCAACTTACAAGGCTCCAGTGTGGCCTCTCTaGTGGGCCAGGAGATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VLKVKVLTEVYMAPTYKAPVWPL*WARRWE Trigger: CTCCCATCTCCTGGCCCATCAGAGAGGCCACACTGG...AGCCTTGTAAGTTGGAGCCATGTAGACTTCAGTCAGAACCTTGACCTTTAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACGGTGTGACTCTACAGTaGAGCCCCTCCCACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: QLSPGWLLSPCVKGQGSDGVTLQ*SPSHTL Trigger: CAGAGTGTGGGAGGGGCTTCACTGTAGAGTCACACC...GTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | TCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATCAAGGTGTGACTCTACAGTaGAGCCCCTCCCACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: STWLQLTRLLCLWSPKHQGVTLQ*SPSHTL Trigger: CAGAGTGTGGGAGGGGCTTCACTGTAGAGTCACACC...TTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACGTGTGGACTCCACGATaGGCCAGAAAGTTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLSPGWLLSPCVKGQGSDVWTPR*ARKLEA Trigger: GGCCTCCAACTTTCTGGCTCATCGTGGAGTCCACAC...GTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | CCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGCACTGTGGACCCTCTGGTaGACCTGGAGTATGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: PKYLVTVTYGNEAPHGVALWTLW*TWSMET Trigger: GGTCTCCATACTCCAGGTGCACCAGAGGGTCCACAG...TGCAACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | AGGAAGGCTGCAGTGAAGTCACACAGTTGCATCATGGGTAAGAGCTGCCAGAAGGCTGTACTTCCTGTCTaGACCATGTGCATCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: RKAAVKSHSCIMGKSCQKAVLPV*TMCIIS Trigger: CGAGATGATGCACATGGTGCAGACAGGAAGTACAGC...CTTCTGGCAGCTCTTACCCATGATGCAACTGTGTGACTTCACTGCAGCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | AAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCCTGTGGACCCTCTGGTaGACCTGGAGTATGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: KVIWFLPLRYLQVTLNFPLWTLW*TWSMET Trigger: GGTCTCCATACTCCAGGTGCACCAGAGGGTCCACAG...GGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | CCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCCCGGTTGGTTACTGCCATCTGTTCCACAGTaGAGTTGGAGCCATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSFEIPPGHTQLSPGWLLPSVPQ*SWSHGF Trigger: GAAACCATGGCTCCAACTCCACTGTGGAACAGATGG...CAGTAACCAACCGGGGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACCTGCTGCCAGATTTGTaGGCAGAAAAGCGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: QLSPGWLLSPCVKGQGSDLLPDL*AEKRLM Trigger: CATGAGGCGCTTTTCTGCTCACAAATCTGGCAGCAG...GTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGCAGTGAACGTTGAGATCTaGACTCCGGCTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PKYLVTVTYGNEAPHGVAVNVEI*TPAEAL Trigger: AAGGGCTTCAGCCGGAGTTCAGATCTCAACGTTCAC...TGCAACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CAACATAAGAAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCGAGCGCTGGTGCGCTTaGAGGTGTGACTCTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: QHKKVIWFLPLRYLQVTLERWCA*RCDSTV Trigger: CACTGTAGAGTCACACCTTCAAGCGCACCAGCGCTC...GAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTTCTTATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | GAAGTCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCAGTGGGCCTTGAGGTATaGGCTCCAACTGAAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: EVYMAPTYKASLLVVSQAVGLEV*APTEDF Trigger: AAAGTCTTCAGTTGGAGCTCATACCTCAAGGCCCAC...TGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | AACGCTTCCGGAAGAACAGAAAGCATGTGTACTGTAGAAAGCCATGCAATTTGTGGTCGCCCGTTAGCCTaGAGAGGAGAGTCCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NASGRTESMCTVESHAICGRPLA*RGESQE Trigger: CTCTTGGGACTCTCCTCTGCAGGCTAACGGGCGACC...ACAAATTGCATGGCTTTCTACAGTACACATGCTTTCTGTTCTTCCGGAAGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCAACTTTCCCTCACTGTGGACCCTCTaGTGCACCTGGAGTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVIWFLPLRYLQVTLNFPSLWTL*CTWSME Trigger: CTCCATACTCCAGGTGCACCAGAGGGTCCACAGTGA...GGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | ACACTCAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTGATGAGCCAGAAAGTTaGAGGCCCGACAGAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLNFPPVGYCLHVLKVKVDEPES*RPDRSL Trigger: GAGGCTTCTGTCGGGCCTCCAACTTTCTGGCTCATC...AACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | GTTCCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGATGAGCCAGAAAGTTaGAGGCCCGACAGAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VPKYLVTVTYGNEAPHGVDEPES*RPDRSL Trigger: GAGGCTTCTGTCGGGCCTCCAACTTTCTGGCTCATC...AACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | ACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATCAAAATGTGAACGTTGAGATCTaGACTCCGGCTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TWLQLTRLLCLWSPKHQNVNVEI*TPAEAL Trigger: AAGGGCTTCAGCCGGAGTTCAGATCTCAACGTTCAC...ATTTTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | AAGTCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATGCTGTACTTCCTGTCTaGACCATGTGCATCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: KSTWLQLTRLLCLWSPKHAVLPV*TMCIIS Trigger: CGAGATGATGCACATGGTGCAGACAGGAAGTACAGC...ATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CAA 72 bp | AAGTCTACATGGCTCCAACTTACAAGGCTTCTCTGCTaGTGGTCTCCCAAGCATCAAAATGCATCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSTWLQLTRLLC*WSPKHQNASWS Trigger: GGACCAGGATGCATTTTGATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | AAGTCTACATGGCTCCAACTTACAAGGCTTCTCTGCTTGTGGTCTCCCAAGCATATTCTTGTCTCCCACTaGGAGCAGCATCCTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: KSTWLQLTRLLCLWSPKHILVSH*EQHPEV Trigger: AACTTCAGGATGCTGCTCTCAGTGGGAGACAAGAAT...ATGCTTGGGAGACCACAAGCAGAGAAGCCTTGTAAGTTGGAGCCATGTAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | GTGTTAAAGGTCAAGGTTCTGACTGAAGTCTACATGGCTCCAACTTACAAGGCTCTGCTGCCAGATTTGTaGGCAGAAAAGCGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: VLKVKVLTEVYMAPTYKALLPDL*AEKRLM Trigger: CATGAGGCGCTTTTCTGCTCACAAATCTGGCAGCAG...AGCCTTGTAAGTTGGAGCCATGTAGACTTCAGTCAGAACCTTGACCTTTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | CAACATAAGAAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCGCCTCATGTGACAGGTaGCTCAATCCCACTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QHKKVIWFLPLRYLQVTLASCDR*LNPTSS Trigger: TGAGGAAGTGGGATTGAGGCACCTGTCACATGAGGC...GAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTTCTTATGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | CAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACTCCCTGCTAACCTGCTaGCAGATTTGTGAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QLSPGWLLSPCVKGQGSDSLLTC*QICEQK Trigger: TTTCTGCTCACAAATCTGGCAGCAGGTTAGCAGGGA...GTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | GTGTTAAAGGTCAAGGTTCTGACTGAAGTCTACATGGCTCCAACTTACAAGGCTAGGTCCCTGCTAACCTaGTGCCAGATTTGTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLKVKVLTEVYMAPTYKARSLLT*CQICEQ Trigger: CTGCTCACAAATCTGGCAGCAGGTTAGCAGGGACCT...AGCCTTGTAAGTTGGAGCCATGTAGACTTCAGTCAGAACCTTGACCTTTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | GTTCCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTCCATCTGTTCCACAGTaGAGTTGGAGCCATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VPKYLVTVTYGNEAPHGVPSVPQ*SWSHGF Trigger: GAAACCATGGCTCCAACTCCACTGTGGAACAGATGG...AACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | GTTCCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTTCCCTGCTAACCTGCTaGCAGATTTGTGAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VPKYLVTVTYGNEAPHGVSLLTC*QICEQK Trigger: TTTCTGCTCACAAATCTGGCAGCAGGTTAGCAGGGA...AACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CCA 90 bp | CAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACAACCGACAGAAGGCGTaGTCACATTTTTCACACCTA | + |
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Preference number: 4 (lower is better) Translates to: QLSPGWLLSPCVKGQGSDNRQKA*SHFSHL Trigger: TAGGTGTGAAAAATGTGACCACGCCTTCTGTCGGTT...GTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| 3UTR CAA 72 bp | AACCAGCAACATAAGAAAGTGATCTGGTTCCTTCCTTaGAGATACCTCCAGGTCACACTCAACTTTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: NQQHKKVIWFLP*RYLQVTLNFPP Trigger: CGGGGGAAAGTTGAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTTCTTATGTTGCTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTTTGGTCCCTGGATATGCAGAAAGCTTGTAGTGTTCCTAAATATCTTGAGAGCCAGTTTCCCTaGTGCTTACTCTGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRFWSLDMQKACSVPKYLESQFP*CLLCSL Trigger: GAGACTGCAGAGTAAGCATCAGGGAAACTGGCTCTC...AAGATATTTAGGAACACTACAAGCTTTCTGCATATCCAGGGACCAAAACCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR TCA 90 bp | AACGCTTCCGGAAGAACAGAAAGCATGTGTACTGTAGAAAGCCATGCAATTTGTATTCTTGTCTCCCACTaGGAGCAGCATCCTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: NASGRTESMCTVESHAICILVSH*EQHPEV Trigger: AACTTCAGGATGCTGCTCTCAGTGGGAGACAAGAAT...ACAAATTGCATGGCTTTCTACAGTACACATGCTTTCTGTTCTTCCGGAAGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR GCA 90 bp | GGTAATTTATTAACCACAAAACCTAACTTGCACAGTAGTGCCGTGGAACACTTTGCCTCATGTGACAGGTaGCTCAATCCCACTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GNLLTTKPNLHSSAVEHFASCDR*LNPTSS Trigger: TGAGGAAGTGGGATTGAGGCACCTGTCACATGAGGC...AAAGTGTTCCACGGCACTACTGTGCAAGTTAGGTTTTGTGGTTAATAAATTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CAA 90 bp | AAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTGCAACCGATGCAGGCAAATCCTaGCGACCCTCATCCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KYLVTVTYGNEAPHGVATDAGKS*RPSSSA Trigger: TGCAGAGGATGAGGGTCGCAAGGATTTGCCTGCATC...GGTTGCAACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS TCA 90 bp | TCTTCACCACCATCTGTTCCACAGTGGAGTTGGAGCCATGGTTTCTaGCCGGAATGTTTGCTGTACTTCCTGTCTGCACCATGTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: SSPPSVPQWSWSHGF*PECLLYFLSAPCAS Trigger: TGATGCACATGGTGCAGACAGGAAGTACAGCAAACATTCCGGTCAGAAACCATGGCTCCAACTCCACTGTGGAACAGATGGTGGTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CAA 90 bp | ACACTCAACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTACTCTCTGGTGGGCCTaGAGGTATGAGCTCCAACTG | + |
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Preference number: 5 (lower is better) Translates to: TLNFPPVGYCLHVLKVKVTLWWA*RYELQL Trigger: CAGTTGGAGCTCATACCTCAAGGCCCACCAGAGAGT...AACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTTGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CAA 90 bp | AACTTTCCCCCGGTTGGTTACTGTCTCCATGTGTTAAAGGTCAAGGTTCTGACTTGTTCCACAGTGGAGTaGGAGCCATGGTTTCTGACC | + |
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Preference number: 5 (lower is better) Translates to: NFPPVGYCLHVLKVKVLTCSTVE*EPWFLT Trigger: GGTCAGAAACCATGGCTCCAACTCCACTGTGGAACA...AGTCAGAACCTTGACCTTTAACACATGGAGACAGTAACCAACCGGGGGAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CAA 90 bp | GTTCCTAAATATCTTGTGACTGTCACTTACGGTAATGAAGCCCCACACGGGGTTTGTTCCACAGTGGAGTaGGAGCCATGGTTTCTGACC | + |
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Preference number: 5 (lower is better) Translates to: VPKYLVTVTYGNEAPHGVCSTVE*EPWFLT Trigger: GGTCAGAAACCATGGCTCCAACTCCACTGTGGAACA...AACCCCGTGTGGGGCTTCATTACCGTAAGTGACAGTCACAAGATATTTAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS-3UTR CAA 90 bp | CAACATAAGAAAGTGATCTGGTTCCTTCCTTTGAGATACCTCCAGGTCACACTCACTCTCTGGTGGGCCTaGAGGTATGAGCTCCAACTG | + |
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Preference number: 5 (lower is better) Translates to: QHKKVIWFLPLRYLQVTLTLWWA*RYELQL Trigger: CAGTTGGAGCTCATACCTCAAGGCCCACCAGAGAGT...GAGTGTGACCTGGAGGTATCTCAAAGGAAGGAACCAGATCACTTTCTTATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS CCA 72 bp | GCGCACTGGTACGGTTTGTCTTCACTGTGGACCCTCTaGTGCACCTGGAGTATGGAGACCCGACTAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AHWYGLSSLWTL*CTWSMETRLKA Trigger: AGCCTTTAGTCGGGTCTCCATACTCCAGGTGCACCAGAGGGTCCACAGTGAAGACAAACCGTACCAGTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS TCA 72 bp | GTGCATCATCTCGCTTCAACGGAGAGCCAGTTTCCCTaGTGCTTACTCTGCAGTCTCCAGCCTTCATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VHHLASTESQFP*CLLCSLQPSLG Trigger: ACCTAATGAAGGCTGGAGACTGCAGAGTAAGCATCAGGGAAACTGGCTCTCCGTTGAAGCGAGATGATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS TCA 72 bp | CCATCTGTTCCACAGTGGAGTTGGAGCCATGGTTTCTaGCCGGAATGTTTGCTGTACTTCCTGTCTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: PSVPQWSWSHGF*PECLLYFLSAP Trigger: TGGTGCAGACAGGAAGTACAGCAAACATTCCGGTCAGAAACCATGGCTCCAACTCCACTGTGGAACAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS GCA 72 bp | ACCGGAATGTTTGCTGTACTTCCTGTCTGCACCATGTaGATCATCTCGCTTCAACGGAGAGCCAGTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TGMFAVLPVCTM*IISLQRRASFP Trigger: AGGGAAACTGGCTCTCCGTTGAAGCGAGATGATGCACATGGTGCAGACAGGAAGTACAGCAAACATTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS CCA 72 bp | TTCACCACCATCTGTTCCACAGTGGAGTTGGAGCCATaGTTTCTGACCGGAATGTTTGCTGTACTTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FTTICSTVELEP*FLTGMFAVLPV Trigger: GACAGGAAGTACAGCAAACATTCCGGTCAGAAACCATGGCTCCAACTCCACTGTGGAACAGATGGTGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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| CDS CAA 72 bp | GTAAGGTTCTTCACCACCATCTGTTCCACAGTGGAGTaGGAGCCATGGTTTCTGACCGGAATGTTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VRFFTTICSTVE*EPWFLTGMFAV Trigger: TACAGCAAACATTCCGGTCAGAAACCATGGCTCCAACTCCACTGTGGAACAGATGGTGGTGAAGAACCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032673.15 ENSMUST00000108436.8 |
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