Pregenerated sensors for ZFP938 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062931

Ensembl transcript IDs: ENSMUST00000041264.15, ENSMUST00000156218.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	TGTTCTGGGAAAGAGAGAGGTGCACTGCTTCTTTCCATAGCCCTTTaGTTTATATGTACTATATTGAGAAGAGTTGAAATACATTATTTT	+
Preference number: 1 (lower is better) Translates to: CSGKERGALLLSIAL*FICTILRRVEIHYF Trigger: AAAATAATGTATTTCAACTCTTCTCAATATAGTACATATAAAGCAAAGGGCTATGGAAAGAAGCAGTGCACCTCTCTCTTTCCCAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156218.2
3UTR CAA 72 bp	CCAATGAGAGAACTTAGTGGAGAGAATGAATATGGTTaGAAATACTATATCTCATTTACTATCCTTCAGGGG	+
Preference number: 4 (lower is better) Translates to: PMRELSGENEYG*KYYISFTILQG Trigger: CCCCTGAAGGATAGTAAATGAGATATAGTATTTCAAACCATATTCATTCTCTCCACTAAGTTCTCTCATTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156218.2
CDS GCA 90 bp	TGTTCTGGGAAAGAGAGAGGTGCACTGCTTCTTTCCATAGCCCTTTaGTTTATATGTACTATATTGAGAAGAGTTGAAATACCTTCCATG	+
Preference number: 5 (lower is better) Translates to: CSGKERGALLLSIAL*FICTILRRVEIPSM Trigger: CATGGAAGGTATTTCAACTCTTCTCAATATAGTACATATAAAGCAAAGGGCTATGGAAAGAAGCAGTGCACCTCTCTCTTTCCCAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041264.15
CDS CAA 90 bp	GGTGCACTGCTTCTTTCCATAGCCCTTTGCTTTATATGTACTATATaGAGAAGAGTTGAAATACCTTCCATGTCTTCTAGAACTTTGACA	+
Preference number: 6 (lower is better) Translates to: GALLLSIALCFICTI*RRVEIPSMSSRTLT Trigger: TGTCAAAGTTCTAGAAGACATGGAAGGTATTTCAACTCTTCTCAATATAGTACATATAAAGCAAAGGGCTATGGAAAGAAGCAGTGCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041264.15
CDS TCA 72 bp	GAAGAGTTGAAATACCTTCCATGTCTTCTAGAACTTTaGCAACATTCTTCACTATTGTTGTCTTCCCAATCA	+
Preference number: 6 (lower is better) Translates to: EELKYLPCLLEL*QHSSLLLSSQS Trigger: TGATTGGGAAGACAACAATAGTGAAGAATGTTGTCAAAGTTCTAGAAGACATGGAAGGTATTTCAACTCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041264.15
CDS CAA 72 bp	CTTCTTTCCATAGCCCTTTGCTTTATATGTACTATATaGAGAAGAGTTGAAATACCTTCCATGTCTTCTAGA	+
Preference number: 6 (lower is better) Translates to: LLSIALCFICTI*RRVEIPSMSSR Trigger: TCTAGAAGACATGGAAGGTATTTCAACTCTTCTCAATATAGTACATATAAAGCAAAGGGCTATGGAAAGAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041264.15

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