Pregenerated sensors for ZFP934 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074865Ensembl transcript IDs: ENSMUST00000082203.7, ENSMUST00000101547.12, ENSMUST00000220648.2, ENSMUST00000221250.2, ENSMUST00000222429.2, ENSMUST00000222746.2, ENSMUST00000222852.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTGCACTCTGACTTCTTTCATGCCTTCTGTGTCTTCTAGAACTTaGACAATGTTCTTGAATATTTTTGAGTCCCAATTAAATCCTATA | + |
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Preference number: 1 (lower is better) Translates to: LCTLTSFMPSVSSRT*TMFLNIFESQLNPI Trigger: TATAGGATTTAATTGGGACTCAAAAATATTCAAGAACATTGTCCAAGTTCTAGAAGACACAGAAGGCATGAAAGAAGTCAGAGTGCAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR GCA 90 bp | TACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGTTCAGACGCTTTCTCTaGACTCTGACTTCTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: YHLEHSCQRHLVTANVGAFRRFL*TLTSFM Trigger: CATGAAAGAAGTCAGAGTGCAGAGAAAGCGTCTGAA...CGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | TACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGAAGGCTTCAACAAATTaGATAATTCCAAGGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: YHLEHSCQRHLVTANVGAKASTN*IIPRGF Trigger: GAACCCCCTTGGAATTATTCAATTTGTTGAAGCCTT...CGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCCCCACTCCTCTTGAGTaGAGTTCACATGCACGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QIICLPLRTQLSAPSCNGPTPLE*SSHARP Trigger: AGGACGTGCATGTGAACTTCACTCAAGAGGAGTGGG...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCCGGCTCCCAACAGGTTaGATTTTTCCTGGTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: QIICLPLRTQLSAPSCNGRLPTG*IFPGLS Trigger: TGAAAGACCAGGAAAAATCCAACCTGTTGGGAGCCG...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTGTCTCCCCAGTATGTGCTCCTTGATGCATTAGGAGATAAGTGTGTTGAACTATGTGACTGGAGGTaGATATGTTGTGAAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLSPQYVLLDALGDKCVELCDWR*ICCEKA Trigger: AGCCTTTTCACAACATATTCACCTCCAGTCACATAG...TTCAACACACTTATCTCCTAATGCATCAAGGAGCACATACTGGGGAGACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTCTTTCCAGTTTGTACTCTTTTACGAAGCTGGAGACGATGTTGAGCAAAGCTTTCTCTGCACTCTaGCTTCTTTCATGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: EFLSSLYSFTKLETMLSKAFSAL*LLSCLL Trigger: CAGAAGGCATGAAAGAAGTCAGAGTGCAGAGAAAGC...TTTGCTCAACATCGTCTCCAGCTTCGTAAAAGAGTACAAACTGGAAAGAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCCTATGTGACTGGAGGTaGATATGTTGTGAAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QIICLPLRTQLSAPSCNGLCDWR*ICCEKA Trigger: AGCCTTTTCACAACATATTCACCTCCAGTCACATAG...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAGATTACTGTGACTTaGAAAGGCTTTTTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: QIICLPLRTQLSAPSCNGEITVT*KGFFTL Trigger: CAGTGTGAAAAAGCCTTTTCAAGTCACAGTAATCTC...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTGTCTCCCCAGTATGTGCTCCTTGATGCATTAGGAGATAAGTGTGTTGAATGTAGGAGATTACTGTaGCTTGAAAAGGCTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PLSPQYVLLDALGDKCVECRRLL*LEKAFS Trigger: TGAAAAAGCCTTTTCAAGTCACAGTAATCTCCTACA...TTCAACACACTTATCTCCTAATGCATCAAGGAGCACATACTGGGGAGACAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGATCTCTCTCTGTCTCTaGAGTATGTGCTCCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KGLTTLFTQFLSSVSSFMISLCL*SMCSRL Trigger: CAGCCTGGAGCACATACTGCAGAGACAGAGAGAGAT...CATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| 3UTR-3UTR CCA 90 bp | GTATCTCTCTATCTCTCTCTGTCTCTGCAGTATGTGCTCCAGGCTGCATTAGGATACTCAGAAAGATTCTaGCCCCTAAAATATGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VSLYLSLSLQYVLQAALGYSERF*PLKYVH Trigger: ATGAACATATTTTAGGGGCCAGAATCTTTCTGAGTA...TCCTAATGCAGCCTGGAGCACATACTGCAGAGACAGAGAGAGATAGAGAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| 3UTR CAA 90 bp | TCTTTTACGAAGCTGGAGACGATGTTGAGCAAAGGCTTCAACAAATaGAATAATTCCAAGGGGGTTCATTTCTGTATGAATTCTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: SFTKLETMLSKGFNK*NNSKGVHFCMNSFM Trigger: CATGAAAGAATTCATACAGAAATGAACCCCCTTGGAATTATTCAATTTGTTGAAGCCTTTGCTCAACATCGTCTCCAGCTTCGTAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR CAA 90 bp | ACTTCTTTCATGCCTTCTGTGTCTTCTAGAACTTGGACAATGTTCTaGAATATTTTTGAGTCCCAATTAAATCCTATAGCGTTGAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TSFMPSVSSRTWTMF*NIFESQLNPIALRF Trigger: GAACCTCAACGCTATAGGATTTAATTGGGACTCAAAAATATTCAAGAACATTGTCCAAGTTCTAGAAGACACAGAAGGCATGAAAGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGTACTCAGAAAGATTCTaGCCCCTAAAATATGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: KGLTTLFTQFLSSVSSFMYSERF*PLKYVH Trigger: ATGAACATATTTTAGGGGCCAGAATCTTTCTGAGTA...CATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| 3UTR CCA 72 bp | GGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTaGCACATGCGCAGATTATTTGTTTACCACTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: GEGRAQVVIRYP*HMRRLFVYHLE Trigger: TTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCAATTCTTTCATGCCTTaGAGCATGACGGTGAGCATA | + |
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Preference number: 3 (lower is better) Translates to: QIICLPLRTQLSAPSCNGNSFMP*SMTVSI Trigger: TATGCTCACCGTCATGCTCAAAGGCATGAAAGAATT...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTGTACATTCATAAGTTCCCCACACCACTGTCTCCCCAGTATGTGCTCCTTGGAGATTACTGTGACTaGAAAAGGCTTTTTCACACT | + |
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Preference number: 3 (lower is better) Translates to: IVYIHKFPTPLSPQYVLLGDYCD*KRLFHT Trigger: AGTGTGAAAAAGCCTTTTCAAGTCACAGTAATCTCC...AAGGAGCACATACTGGGGAGACAGTGGTGTGGGGAACTTATGAATGTACACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCAAAGGCTTCAACAAATaGAATAATTCCAAGGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: QIICLPLRTQLSAPSCNGKGFNK*NNSKGV Trigger: AACCCCCTTGGAATTATTCAATTTGTTGAAGCCTTT...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGAATGTTCTTCTATGAGTTaGAAGATGACCGTATTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RPYHIIHTVSLFSVFFYECSSMS*KMTVLR Trigger: TCTCAATACGGTCATCTTCAAACTCATAGAAGAACA...TTCATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222746.2 |
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| 3UTR CAA 72 bp | AAGGAGAATTCTCCTTCGCCTCGGACGTGTCACTCCTaGATTGGCTGCAGCCCATCGGCCGAGTTGACGTCA | + |
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Preference number: 4 (lower is better) Translates to: KENSPSPRTCHS*IGCSPSAELTS Trigger: TGACGTCAACTCGGCCGATGGGCTGCAGCCAATCAAGGAGTGACACGTCCGAGGCGAAGGAGAATTCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS-3UTR CCA 90 bp | TACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGTGTACACAGGGCAACTaGGCACCAACTTCTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: YHLEHSCQRHLVTANVGACTQGN*APTSED Trigger: GTCTTCAGAAGTTGGTGCCCAGTTGCCCTGTGTACA...CGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS-3UTR TCA 90 bp | GTATCTCTCTATCTCTCTCTGTCTCTGCAGTATGTGCTCCAGGCTGCATTAGGATGTAGGTCTCCAGCATaGCATGTTTGTAGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSLYLSLSLQYVLQAALGCRSPA*HVCRAS Trigger: AGAAGCTCTACAAACATGTCATGCTGGAGACCTACA...TCCTAATGCAGCCTGGAGCACATACTGCAGAGACAGAGAGAGATAGAGAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000222746.2 |
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| CDS-3UTR TCA 90 bp | CCACTGTCTCCCCAGTATGTGCTCCTTGATGCATTAGGAGATAAGTGTGTTGAAGCTTTCTCTGCACTCTaGCTTCTTTCATGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLSPQYVLLDALGDKCVEAFSAL*LLSCLL Trigger: CAGAAGGCATGAAAGAAGTCAGAGTGCAGAGAAAGC...TTCAACACACTTATCTCCTAATGCATCAAGGAGCACATACTGGGGAGACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGAGCAAAGGCTTCAACAAATTGAATAATTCCAAGGGGGTTCATTTCTGTCTGGGCACCAACTTCTaGAGACCTCCTGGCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MLSKGFNKLNNSKGVHFCLGTNF*RPPGVS Trigger: AGAGACGCCAGGAGGTCTTCAGAAGTTGGTGCCCAG...ACAGAAATGAACCCCCTTGGAATTATTCAATTTGTTGAAGCCTTTGCTCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS-3UTR TCA 90 bp | CAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGATAGCCAACTTGTATaGTCCCCTGAAGACACCACA | + |
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Preference number: 4 (lower is better) Translates to: QIICLPLRTQLSAPSCNGDSQLV*SPEDTT Trigger: TGTGGTGTCTTCAGGGGATCATACAAGTTGGCTATC...GCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS-3UTR GCA 90 bp | GTATCTCTCTATCTCTCTCTGTCTCTGCAGTATGTGCTCCAGGCTGCATTAGGAAAGATGACTGGGCTTTaGAAATCCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: VSLYLSLSLQYVLQAALGKMTGL*KSFTTL Trigger: CAATGTGGTAAAGGATTTGCAAAGCCCAGTCATCTT...TCCTAATGCAGCCTGGAGCACATACTGCAGAGACAGAGAGAGATAGAGAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| CDS-3UTR GCA 90 bp | GAGTTTCTTTCCAGTTTGTACTCTTTTACGAAGCTGGAGACGATGTTGAGCAAATTCAGACGCTTTCTCTaGACTCTGACTTCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: EFLSSLYSFTKLETMLSKFRRFL*TLTSFM Trigger: CATGAAAGAAGTCAGAGTGCAGAGAAAGCGTCTGAA...TTTGCTCAACATCGTCTCCAGCTTCGTAAAAGAGTACAAACTGGAAAGAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| CDS-3UTR TCA 90 bp | AGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGAATGTAGGTCTCCAGCATaGCATGTTTGTAGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RPYHIIHTVSLFSVFFYECRSPA*HVCRAS Trigger: AGAAGCTCTACAAACATGTCATGCTGGAGACCTACA...TTCATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000222746.2 |
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| CDS-3UTR GCA 90 bp | TGTCAATGTCAACTGCAAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAAGATGACTGGGCTTTaGAAATCCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: CQCQLQRPYHIIHTVSLFKMTGL*KSFTTL Trigger: CAATGTGGTAAAGGATTTGCAAAGCCCAGTCATCTT...GAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTTGCAGTTGACATTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| 3UTR CAA 72 bp | AAGCTGGAGACGATGTTGAGCAAAGGCTTCAACAAATaGAATAATTCCAAGGGGGTTCATTTCTGTATGAAT | + |
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Preference number: 4 (lower is better) Translates to: KLETMLSKGFNK*NNSKGVHFCMN Trigger: ATTCATACAGAAATGAACCCCCTTGGAATTATTCAATTTGTTGAAGCCTTTGCTCAACATCGTCTCCAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGAAGATGACTGGGCTTTaGAAATCCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: KGLTTLFTQFLSSVSSFMKMTGL*KSFTTL Trigger: CAATGTGGTAAAGGATTTGCAAAGCCCAGTCATCTT...CATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222746.2 |
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| CDS-3UTR CCA 90 bp | TGTCAATGTCAACTGCAAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCTGTTCTTCAATATTTTaGGCTTCCCAATTAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CQCQLQRPYHIIHTVSLFCSSIF*ASQLKP Trigger: AGGCTTTAATTGGGAAGCCCAAAATATTGAAGAACA...GAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTTGCAGTTGACATTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGTCTCTCCAGTACGTATaGTTATATGTGTTTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KGLTTLFTQFLSSVSSFMSLQYV*LYVFGD Trigger: ATCTCCAAACACATATAAGCATACGTACTGGAGAGA...CATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGAATGTTCTTCAATATTTTaGGCTTCCCAATTAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RPYHIIHTVSLFSVFFYECSSIF*ASQLKP Trigger: AGGCTTTAATTGGGAAGCCCAAAATATTGAAGAACA...TTCATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR CAA 90 bp | CCACTGTCTCCCCAGTATGTGCTCCTTGATGCATTAGGAGATAAGTGTGTTGAAAATTCTTTCATGCCTTaGAGCATGACGGTGAGCATA | + |
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Preference number: 5 (lower is better) Translates to: PLSPQYVLLDALGDKCVENSFMP*SMTVSI Trigger: TATGCTCACCGTCATGCTCAAAGGCATGAAAGAATT...TTCAACACACTTATCTCCTAATGCATCAAGGAGCACATACTGGGGAGACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222429.2 |
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| CDS-3UTR CAA 90 bp | GTATCTCTCTATCTCTCTCTGTCTCTGCAGTATGTGCTCCAGGCTGCATTAGGATGTTCTTCTATGAGTTaGAAGATGACCGTATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: VSLYLSLSLQYVLQAALGCSSMS*KMTVLR Trigger: TCTCAATACGGTCATCTTCAAACTCATAGAAGAACA...TCCTAATGCAGCCTGGAGCACATACTGCAGAGACAGAGAGAGATAGAGAGATAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR CAA 90 bp | TGTCAATGTCAACTGCAAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCATGTTCTTCAATATTTaGGGCTTCCCAATTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: CQCQLQRPYHIIHTVSLFMFFNI*GFPIKA Trigger: GGCTTTAATTGGGAAGCCCAAAATATTGAAGAACAT...GAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTTGCAGTTGACATTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR CAA 90 bp | TGTCAATGTCAACTGCAAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCTGTTCTTCTATGAGTTaGAAGATGACCGTATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CQCQLQRPYHIIHTVSLFCSSMS*KMTVLR Trigger: TCTCAATACGGTCATCTTCAAACTCATAGAAGAACA...GAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTTGCAGTTGACATTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCCTTACCACATTATTCACACAGTTTCTCTCTTCAGTGTCTTCTTTTATGATGTTCTTCAATATTTaGGGCTTCCCAATTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: KGLTTLFTQFLSSVSSFMMFFNI*GFPIKA Trigger: GGCTTTAATTGGGAAGCCCAAAATATTGAAGAACAT...CATAAAAGAAGACACTGAAGAGAGAAACTGTGTGAATAATGTGGTAAGGCCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101547.12 ENSMUST00000220648.2 |
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| CDS TCA 72 bp | GTTCCTCTGTACACAGGGCAACTGGGCACCAACTTCTaGAGACCTCCTGGCGTCTCTGTGGCATGCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: VPLYTGQLGTNF*RPPGVSVACRV Trigger: TACCCTGCATGCCACAGAGACGCCAGGAGGTCTTCAGAAGTTGGTGCCCAGTTGCCCTGTGTACAGAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS TCA 72 bp | AAGACCTCCTGGCGTCTCTGTGGCATGCAGGGTAACTaGCCCAACAGACAGAAAGCCTTCCTGGAGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KTSWRLCGMQGN*PNRQKAFLEFC Trigger: GCAGAACTCCAGGAAGGCTTTCTGTCTGTTGGGTCAGTTACCCTGCATGCCACAGAGACGCCAGGAGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS CCA 72 bp | AAGGAACTTCAGTGGTTCCTCTGTACACAGGGCAACTaGGCACCAACTTCTGAAGACCTCCTGGCGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KELQWFLCTQGN*APTSEDLLASL Trigger: CAGAGACGCCAGGAGGTCTTCAGAAGTTGGTGCCCAGTTGCCCTGTGTACAGAGGAACCACTGAAGTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221250.2 |
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| CDS CAA 72 bp | CTGACTCCTTTCACACCTTCTGTGTCTTCTAGAACTTaGACAATGTTCTTCAATATTTTGGGCTTCCCAATT | + |
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Preference number: 6 (lower is better) Translates to: LTPFTPSVSSRT*TMFFNILGFPI Trigger: AATTGGGAAGCCCAAAATATTGAAGAACATTGTCAAAGTTCTAGAAGACACAGAAGGTGTGAAAGGAGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000082203.7 ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222852.2 |
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| CDS CAA 72 bp | GTGTCTTCTAGAACTTTGACAATGTTCTTCAATATTTaGGGCTTCCCAATTAAAGCCTATAGCATTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VSSRTLTMFFNI*GFPIKAYSIEV Trigger: AACCTCAATGCTATAGGCTTTAATTGGGAAGCCCAAAATATTGAAGAACATTGTCAAAGTTCTAGAAGACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082203.7 ENSMUST00000101547.12 ENSMUST00000220648.2 ENSMUST00000222852.2 |
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