Pregenerated sensors for ZFP92 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031374Ensembl transcript IDs: ENSMUST00000033740.12, ENSMUST00000086470.3
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACTTGGAGGGCCAGACTTGCCACCATACTCACCAGTCATGGGCTaGAAAGGCTACTTTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SLGGPDLPPYSPVMG*KGYFLLSELGQESG Trigger: CCCTGACTCCTGCCCAAGCTCAGACAGGAGAAAGTAGCCTTTCCAGCCCATGACTGGTGAGTATGGTGGCAAGTCTGGCCCTCCAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | GGAGCAGGACAAACTACACTGAAGGTGGAGGGCACTCTGTCATTCTaGATTGCTTCTCTGTTTCACACTGGGGAAGGGGCCATCCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GAGQTTLKVEGTLSF*IASLFHTGEGAILP Trigger: TGGCAGGATGGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | CACTTGGCTGGCCGCTCTGCTAGGTCAGACATTTGGCCTCCTCCCTaGGGTCTTTGTCTTGCAGCTTTGTTTCTAGTGCAAACTCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: HLAGRSARSDIWPPP*GLCLAALFLVQTPQ Trigger: TTGGGGAGTTTGCACTAGAAACAAAGCTGCAAGACAAAGACCTCAGGGAGGAGGCCAAATGTCTGACCTAGCAGAGCGGCCAGCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| 3UTR CCA 90 bp | GGTGGAGGGCACTCTGTCATTCTGAATTGCTTCTCTGTTTCACACTaGGGAAGGGGCCATCCTGCCATTCTGAACTGCTGCCCTGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GGGHSVILNCFSVSH*GRGHPAILNCCPVS Trigger: AGAAACAGGGCAGCAGTTCAGAATGGCAGGATGGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | AGGAGTGGCACAAAGAGGCCATGTCTTACCTACGCCCTTCTTCTATaGGGCACCAGAGGAAAGAGGCTCCTTTCCCAAAATGGAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: RSGTKRPCLTYALLL*GTRGKRLLSQNGDP Trigger: AGGGTCTCCATTTTGGGAAAGGAGCCTCTTTCCTCTGGTGCCTCATAGAAGAAGGGCGTAGGTAAGACATGGCCTCTTTGTGCCACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | GATATGAGAGGACTGGAAAGTAGCTTGCTGCCCAGGATGCTGAGCTaGGTATACCAAGGGACAAATCTCCAGGGTTTCTGCACAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: DMRGLESSLLPRMLS*VYQGTNLQGFCTGR Trigger: TCTGCCTGTGCAGAAACCCTGGAGATTTGTCCCTTGGTATACTCAGCTCAGCATCCTGGGCAGCAAGCTACTTTCCAGTCCTCTCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR GCA 90 bp | AGGACAAACTACACTGAAGGTGGAGGGCACTCTGTCATTCTGAATTaGTTCTCTGTTTCACACTGGGGAAGGGGCCATCCTGCCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: RTNYTEGGGHSVILN*FSVSHWGRGHPAIL Trigger: CAGAATGGCAGGATGGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | GTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTaGACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VSRSSHTLLAGGSCL*TSLTLQGRYHHSSW Trigger: CCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR GCA 90 bp | CATGGGACTTGGAGTGGAGACACAAGGCTGAGCACAACATACAACTaGAGGCTCATGAGAAAGAAAGCAATCACAGGACAAGTCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: HGTWSGDTRLSTTYN*RLMRKKAITGQVWR Trigger: CCTCCAGACTTGTCCTGTGATTGCTTTCTTTCTCATGAGCCTGCAGTTGTATGTTGTGCTCAGCCTTGTGTCTCCACTCCAAGTCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CCA 90 bp | CAGAGGAAAGAGGCTCCTTTCCCAAAATGGAGACCCTCAGGTCTCTaGACTTTAACCTCTCTGCAAGATGACAGCTTTGGTACAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: QRKEAPFPKWRPSGL*TLTSLQDDSFGTDP Trigger: AGGGTCTGTACCAAAGCTGTCATCTTGCAGAGAGGTTAAAGTCCAGAGACCTGAGGGTCTCCATTTTGGGAAAGGAGCCTCTTTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CCA 90 bp | GTGTGTGTATGTGTGTGTGTATGTGTGTGTGTGAGTGATATCACTTaGAGGGCCAGACTTGCCACCATACTCACCAGTCATGGGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVSDIT*RARLATILTSHGLE Trigger: TTCCAGCCCATGACTGGTGAGTATGGTGGCAAGTCTGGCCCTCCAAGTGATATCACTCACACACACACATACACACACACATACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | GCTTTCCTTTTCGACCTATCAGGGAAGGAGCAGGACAAACTACACTaGAGGTGGAGGGCACTCTGTCATTCTGAATTGCTTCTCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: AFLFDLSGKEQDKLH*RWRALCHSELLLCF Trigger: GAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCTGCTCCTTCCCTGATAGGTCGAAAAGGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | TTGTGTGTGTGTGTGTGTATGTGTGTGTGTATGTGTGTGTGTGAGTaGTATCACTTGGAGGGCCAGACTTGCCACCATACTCACCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: LCVCVCMCVCMCVCE*YHLEGQTCHHTHQS Trigger: TGACTGGTGAGTATGGTGGCAAGTCTGGCCCTCCAAGTGATATCACTCACACACACACATACACACACACATACACACACACACACACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CCA 90 bp | CTTCCACCTCATGATAAATTCAGAAAGGACCATCTGTCAGTTTCCTaGAGACAATGCCAGGGTATTCACACAGCACCTGAAAAGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: LPPHDKFRKDHLSVS*RQCQGIHTAPEKHP Trigger: TGGGTGCTTTTCAGGTGCTGTGTGAATACCCTGGCATTGTCTCCAGGAAACTGACAGATGGTCCTTTCTGAATTTATCATGAGGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CCA 90 bp | AAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATaGCCACACCGCTCCCAGCGTGATTGGATCTCTTACCTAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KFCLDRKLEQVSNLL*PHRSQRDWISYLGF Trigger: AAAGCCTAGGTAAGAGATCCAATCACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| 3UTR CCA 90 bp | CACTTAGGAGGTAGAGGCAGGAGAATTAAGAGTCAAAGGCCAGCCTaGTCACACAGGCTTAAAATAACACCTCCAAAGAAAACCATGCTT | + |
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Preference number: 1 (lower is better) Translates to: HLGGRGRRIKSQRPA*SHRLKITPPKKTML Trigger: AAGCATGGTTTTCTTTGGAGGTGTTATTTTAAGCCTGTGTGACCAGGCTGGCCTTTGACTCTTAATTCTCCTGCCTCTACCTCCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR TCA 90 bp | AGGCATCAACAGGTATTGGAGGCCATTTATACACTGGGATATATATaGAGTGAGGATATACACACCAACACTCGGAAACATCTAAAAATG | + |
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Preference number: 1 (lower is better) Translates to: RHQQVLEAIYTLGYI*SEDIHTNTRKHLKM Trigger: CATTTTTAGATGTTTCCGAGTGTTGGTGTGTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTTGATGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGGATGGAACACAGGGCCCGAGGTCTTCTCTGTTTCACACTaGGGAAGGGGCCATCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FSCLSLGRSQGWNTGPEVFSVSH*GRGHPA Trigger: GGCAGGATGGCCCCTTCCCCAGTGTGAAACAGAGAA...GACCTCGGGCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CAA 90 bp | CTGTTTAGGAGCCTTTTGCACAGGCCTGATCTCGCAGTTGCAGTATaGAGCCCTGTGAGAAGCCTGCACCCTGGGCAGACTAAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LFRSLLHRPDLAVAV*SPVRSLHPGQTKAG Trigger: GCCTGCCTTAGTCTGCCCAGGGTGCAGGCTTCTCACAGGGCTCAATACTGCAACTGCGAGATCAGGCCTGTGCAAAAGGCTCCTAAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGCTACTTTCTCCTGTCTaGGCTTGGGCAGGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQLLSPV*AWAGVR Trigger: CCTGACTCCTGCCCAAGCTCAGACAGGAGAAAGTAG...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAGTTAGTAACTTGCTATaGCCACACCGCTCCCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: GLPFSPSFYRGQRDAPIAVSNLL*PHRSQR Trigger: ACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAAC...TGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAGGACAAACTACACTGAAGGTGGAGGGCACTCTGTCATTCTGAATTGCGCCATCCTGCCATTCTaGACTGCTGCCCTGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RSRTNYTEGGGHSVILNCAILPF*TAALFL Trigger: CAGAAACAGGGCAGCAGTTCAGAATGGCAGGATGGC...GCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCTGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCACATATAGCCTAGCCTaGGCCCCAGGACAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLTYSLA*APGQQV Trigger: AACCTGCTGTCCTGGGGCGCAGGCTAGGCTATATGT...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCTCACTCTTCTTGGAGTaGCCAAGGGCAGCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLSLFLE*PRAAST Trigger: AGTGGAGGCTGCCCTTGGGCACTCCAAGAAGAGTGA...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGATGCACAGTAGTCCTTCATTTCTGCTCTCATCATTCTTAGGTGGTGGAGTGCCTAGAGTCGGCTaGACCTACCTGCTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LQMHSSPSFLLSSFLGGGVPRVG*TYLLPF Trigger: GAAGGGAAGCAGGTAGGTCCAGCCGACTCTAGGCAC...TCCACCACCTAAGAATGATGAGAGCAGAAATGAAGGACTACTGTGCATCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGATGCACAGTAGTCCTTCATTTCTGCTCTCATCATTCTTAGGTGGTGGACAGGACCTCCCACTGTaGGTACCTGCACTGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: LQMHSSPSFLLSSFLGGGQDLPL*VPALHE Trigger: CTCATGCAGTGCAGGTACCCACAGTGGGAGGTCCTG...TCCACCACCTAAGAATGATGAGAGCAGAAATGAAGGACTACTGTGCATCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CAA 90 bp | CACTCACACACCGAAGCACACACAGGAGAACCCTGCCTAGGTAACTaGAGGAGCCTGCCTGTACAATCTCTAGGCATCAATTGTATCATC | + |
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Preference number: 2 (lower is better) Translates to: HSHTEAHTGEPCLGN*RSLPVQSLGINCII Trigger: GATGATACAATTGATGCCTAGAGATTGTACAGGCAGGCTCCTCAAGTTACCTAGGCAGGGTTCTCCTGTGTGTGCTTCGGTGTGTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGACACAATGGGTTCCATaGAAGGGATTAGCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQTQWVP*KGLAEK Trigger: TTTCTCTGCTAATCCCTTTCATGGAACCCATTGTGT...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCCCTCAGGCAGCTTTGTaGGAAAATCTTTCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLPQAAL*ENLSPS Trigger: GGAGGGAGAAAGATTTTCTCACAAAGCTGCCTGAGG...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCGGCCAGACTCATTTCTaGGGCCATCTAAGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLGQTHF*GHLSAN Trigger: GTTTGCACTTAGATGGCCCCAGAAATGAGTCTGGCC...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGAACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTGGAGTGCGTGAGTGATATCACTTaGAGGGCCAGACTTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: SLNLTNLAGKVPSLFLECVSDIT*RARLAT Trigger: GGTGGCAAGTCTGGCCCTCCAAGTGATATCACTCAC...GCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR CAA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTaGAACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SFQVFPYSLGRRQLS*NLTNLAGKVPSLFL Trigger: CAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACCTACTACACCTAACTGCCTGCTGAAAACATCTAGGAACCGGAACTACCTCTACATCTCTCCCTaGAGACCCCACTTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: REPTTPNCLLKTSRNRNYLYISP*RPHFLL Trigger: CAGCAGAAAGTGGGGTCTGCAGGGAGAGATGTAGAG...GTAGTTCCGGTTCCTAGATGTTTTCAGCAGGCAGTTAGGTGTAGTAGGTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTAACCTCTCTGCAAGATaGCAGCTTTGGTACAGACCC | + |
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Preference number: 2 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPNLSAR*QLWYRP Trigger: GGGTCTGTACCAAAGCTGTCATCTTGCAGAGAGGTT...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACCTACTACACCTAACTGCCTGCTGAAAACATCTAGGAACCGGAACTACTCGGCTGGACCTACCTaGTTCCCTTCTAACTACATC | + |
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Preference number: 2 (lower is better) Translates to: REPTTPNCLLKTSRNRNYSAGPT*FPSNYI Trigger: GATGTAGTTAGAAGGGAAGCAGGTAGGTCCAGCCGA...GTAGTTCCGGTTCCTAGATGTTTTCAGCAGGCAGTTAGGTGTAGTAGGTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTAATCTCCAGGGTTTCTaGACAGGCAGAATAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPNLQGF*TGRIEL Trigger: CAGTTCTATTCTGCCTGTGCAGAAACCCTGGAGATT...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTCATCTGTCAGTTTCCTaGAGACAATGCCAGGGTATT | + |
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Preference number: 2 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPHLSVS*RQCQGI Trigger: AATACCCTGGCATTGTCTCCAGGAAACTGACAGATG...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | TGCAAACTCCTAACCTGTTATCAGCACACAATGGGTTCCATGAAAGGGATTAGCGGCACTCTGTCATTCTaGATTGCTTCTCTGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: CKLLTCYQHTMGSMKGISGTLSF*IASLFH Trigger: GTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCC...GCTAATCCCTTTCATGGAACCCATTGTGTGCTGATAACAGGTTAGGAGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | ATACACACCAACACTCGGAAACATCTAAAAATGTCACTAAGAGGCCAGACACACCTAGAGAAACCTGTGTaGATTCTGGGCTTCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: IHTNTRKHLKMSLRGQTHLEKPV*ILGFPN Trigger: ATTGGGGAAGCCCAGAATGCACACAGGTTTCTCTAG...GTGTGTCTGGCCTCTTAGTGACATTTTTAGATGTTTCCGAGTGTTGGTGTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | ATTATTTTCACAGCCTCATCTAGACTGGTGTTTTACCAAAGTCTGAGTTCTATAATCCCACAGAGCACTTaGCTGGCCGCTCTGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: IIFTASSRLVFYQSLSSIIPQST*LAALLG Trigger: ACCTAGCAGAGCGGCCAGCCAAGTGCTCTGTGGGAT...TATAGAACTCAGACTTTGGTAAAACACCAGTCTAGATGAGGCTGTGAAAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| 3UTR CAA 90 bp | TTATTAAAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTaGCTATGGCCACACCGCTCCCAGCGTGATTGGATCTCTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: LLKFCLDRKLEQVSN*LWPHRSQRDWISYL Trigger: TAGGTAAGAGATCCAATCACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| 3UTR-3UTR TCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACGGTACCTGCACTGCATaGGGCCTAGTTTCCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYGTCTA*GLVSCI Trigger: GATACAGGAAACTAGGCCTCATGCAGTGCAGGTACC...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTGAAAATAACTACACATaGCCCCTTCTCTGGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPENNYT*PLLWRF Trigger: AAATCTCCAGAGAAGGGGTCATGTGTAGTTATTTTC...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACTCCTAACCTGTTATCAGCACACAATGGGTTCCATGAAAGGGATTAGCACAGCAGGTTCCCTGTaGTTTCCTATAAAGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: CKLLTCYQHTMGSMKGISTAGSL*FPIKHQ Trigger: TTGATGCTTTATAGGAAAGCACAGGGAACCTGCTGT...GCTAATCCCTTTCATGGAACCCATTGTGTGCTGATAACAGGTTAGGAGTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACTACCATCACTCTTCTTaGAGTGCCCAAGGGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYYHHSS*SAQGQP Trigger: AGGCTGCCCTTGGGCACTCCAAGAAGAGTGATGGTA...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR TCA 90 bp | ATACACACCAACACTCGGAAACATCTAAAAATGTCACTAAGAGGCCAGACACACTATTCACACAGCACCTaGAAAGCACCCAAAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: IHTNTRKHLKMSLRGQTHYSHST*KAPKVL Trigger: TAAGACTTTGGGTGCTTTTCAGGTGCTGTGTGAATA...GTGTGTCTGGCCTCTTAGTGACATTTTTAGATGTTTCCGAGTGTTGGTGTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAGGCACCATTTCTCTCATAAATGTGCAAGGGCTTGAACTGATATTACTTCAGGCAATTCCCATGTaGATGGAAAAGACCAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: KGGTISLINVQGLELILLQAIPM*MEKTNS Trigger: AGAGTTGGTCTTTTCCATCCACATGGGAATTGCCTG...AAGTAATATCAGTTCAAGCCCTTGCACATTTATGAGAGAAATGGTGCCTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 90 bp | TGCTCCCATAGCAACCTCCTGAGGCTTCAAGAGATTCATTCAATTTaGTTAGATTCCCTGAAGCACCTTAAAATTAAGAGTGTAATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: CSHSNLLRLQEIHSI*LDSLKHLKIKSVIQ Trigger: CTGGATTACACTCTTAATTTTAAGGTGCTTCAGGGAATCTAACAAAATTGAATGAATCTCTTGAAGCCTCAGGAGGTTGCTATGGGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR-3UTR GCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACTCTGTCATTCTGAATTaGTTCTCTGTTTCACACTGG | + |
|
Preference number: 2 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYSVILN*FSVSHW Trigger: CCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGA...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR GCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACAGCACAACATACAACTaGAGGCTCATGAGAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYSTTYN*RLMRKK Trigger: TTTCTTTCTCATGAGCCTGCAGTTGTATGTTGTGCT...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGGATGGAACACAGGGCCCGAGGTCCCCTGCCTAGGTAACTaGAGGAGCCTGCCTGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: FSCLSLGRSQGWNTGPEVPCLGN*RSLPVQ Trigger: TTGTACAGGCAGGCTCCTCAAGTTACCTAGGCAGGG...GACCTCGGGCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | TGCACAGGACCTCCCACTGTGGGTACCTGCACTGCATaGGGCCTAGTTTCCTGTATCTGTGCCAGCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTGPPTVGTCTA*GLVSCICASPR Trigger: CCTAGGGCTGGCACAGATACAGGAAACTAGGCCTCATGCAGTGCAGGTACCCACAGTGGGAGGTCCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | AGTCTGCACAGGACCTCCCACTGTGGGTACCTGCACTaGATGAGGCCTAGTTTCCTGTATCTGTGCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLHRTSHCGYLH*MRPSFLYLCQP Trigger: GGGCTGGCACAGATACAGGAAACTAGGCCTCATGCAGTGCAGGTACCCACAGTGGGAGGTCCTGTGCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTCTCCTGTCTGAGCTaGGGCAGGAGTCAGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQFSCLS*GRSQGW Trigger: CCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAA...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | ACCAGTCATGGGCTGGAAAGGCTACTTTCTCCTGTCTaGGCTTGGGCAGGAGTCAGGGATGGAACACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSHGLERLLSPV*AWAGVRDGTQG Trigger: GCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAAAGTAGCCTTTCCAGCCCATGACTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | AGGCACTCACACACCGAAGCACACACAGGAGAACCCTaGCTAGGTAACTTGAGGAGCCTGCCTGTACAATCT | + |
|
Preference number: 3 (lower is better) Translates to: RHSHTEAHTGEP*LGNLRSLPVQS Trigger: AGATTGTACAGGCAGGCTCCTCAAGTTACCTAGGCAGGGTTCTCCTGTGTGTGCTTCGGTGTGTGAGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | TCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTaGAGTGCCCAAGGGCAGCCTCCACTTTACCCGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLTLQGRYHHSS*SAQGQPPLYPY Trigger: GTACGGGTAAAGTGGAGGCTGCCCTTGGGCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | ATCATCCACAAAGCTAAAGCGATCCCACAGAGCACTTaGCTGGCCGCTCTGCTAGGTCAGACATTTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: IIHKAKAIPQST*LAALLGQTFGL Trigger: GAGGCCAAATGTCTGACCTAGCAGAGCGGCCAGCCAAGTGCTCTGTGGGATCGCTTTAGCTTTGTGGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR TCA 72 bp | ACCCTCAGGTCTCTGGACTTTAACCTCTCTGCAAGATaGCAGCTTTGGTACAGACCCTCCAAGCAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLRSLDFNLSAR*QLWYRPSKQQQ Trigger: CTGCTGCTGCTTGGAGGGTCTGTACCAAAGCTGTCATCTTGCAGAGAGGTTAAAGTCCAGAGACCTGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | GGACTCTGGAGCATTTCAGGGTACTCCACTCTAAAGTaGTCTACATCTCTCCCTGCAGACCCCACTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLWSISGYSTLK*STSLPADPTFC Trigger: GCAGAAAGTGGGGTCTGCAGGGAGAGATGTAGAGCACTTTAGAGTGGAGTACCCTGAAATGCTCCAGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGATCTCTAGGCATCAATaGTATCATCCAGGACTACGG | + |
|
Preference number: 3 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQISRHQ*YHPGLR Trigger: CCGTAGTCCTGGATGATACAATTGATGCCTAGAGAT...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | CAAACTACACTGAAGGTGGAGGGCACTCTGTCATTCTaGATTGCTTCTCTGTTTCACACTGGGGAAGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QTTLKVEGTLSF*IASLFHTGEGA Trigger: GGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | TACACTGAAGGTGGAGGGCACTCTGTCATTCTGAATTaGTTCTCTGTTTCACACTGGGGAAGGGGCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: YTEGGGHSVILN*FSVSHWGRGHP Trigger: AGGATGGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | CATAATAGGGTCCAAGTTTTCACATATAGCCTAGCCTaGGCCCCAGGACAGCAGGTTCCCTGTGCTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HNRVQVFTYSLA*APGQQVPCAFL Trigger: TAGGAAAGCACAGGGAACCTGCTGTCCTGGGGCGCAGGCTAGGCTATATGTGAAAACTTGGACCCTATTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | AGTGAGTGGCCTTGGCTAGCATTAGAACCTAAGGGCTaGCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SEWPWLALEPKG*HFPLASTEAKE Trigger: CTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCCTTAGGTTCTAATGCTAGCCAAGGCCACTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR CCA 72 bp | CACTCTGTCATTCTGAATTGCTTCTCTGTTTCACACTaGGGAAGGGGCCATCCTGCCATTCTGAACTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HSVILNCFSVSH*GRGHPAILNCC Trigger: GCAGCAGTTCAGAATGGCAGGATGGCCCCTTCCCCAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | TCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTaGACCTCACTAACCTTGCAGGGAAGGTACCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSHTLLAGGSCL*TSLTLQGRYHH Trigger: GTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | TCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTaGTATGGCCACACCGCTCCCAGCGTGATTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: SALIGNWSRLVT*YGHTAPSVIGS Trigger: AGATCCAATCACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR CCA 72 bp | GAGGCTCCTTTCCCAAAATGGAGACCCTCAGGTCTCTaGACTTTAACCTCTCTGCAAGATGACAGCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EAPFPKWRPSGL*TLTSLQDDSFG Trigger: ACCAAAGCTGTCATCTTGCAGAGAGGTTAAAGTCCAGAGACCTGAGGGTCTCCATTTTGGGAAAGGAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | TTCGACCTATCAGGGAAGGAGCAGGACAAACTACACTaGAGGTGGAGGGCACTCTGTCATTCTGAATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FDLSGKEQDKLH*RWRALCHSELL Trigger: AAGCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCTGCTCCTTCCCTGATAGGTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | ACAAAGAGGCCATGTCTTACCTACGCCCTTCTTCTATaGGGCACCAGAGGAAAGAGGCTCCTTTCCCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TKRPCLTYALLL*GTRGKRLLSQN Trigger: ATTTTGGGAAAGGAGCCTCTTTCCTCTGGTGCCTCATAGAAGAAGGGCGTAGGTAAGACATGGCCTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | TTCAGAAAGGACCATCTGTCAGTTTCCTGGAGACAATaGCAGGGTATTCACACAGCACCTGAAAAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FRKDHLSVSWRQ*QGIHTAPEKHP Trigger: TGGGTGCTTTTCAGGTGCTGTGTGAATACCCTGGCATTGTCTCCAGGAAACTGACAGATGGTCCTTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | TGGCCCTCTAAGACTCTTGCCCTAGAGAAACCTGTGTaGATTCTGGGCTTCCCCAATACACTATATCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WPSKTLALEKPV*ILGFPNTLYPL Trigger: AAGAGGATATAGTGTATTGGGGAAGCCCAGAATGCACACAGGTTTCTCTAGGGCAAGAGTCTTAGAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR GCA 72 bp | GTCAGACATTTGGCCTCCTCCCTGAGGTCTTTGTCTTaGAGCTTTGTTTCTAGTGCAAACTCCCCAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRHLASSLRSLS*SFVSSANSPSF Trigger: GAAACTTGGGGAGTTTGCACTAGAAACAAAGCTGCAAGACAAAGACCTCAGGGAGGAGGCCAAATGTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTATGTGTGTGTGTGAGTGATATCACTTaGAGGGCCAGACTTGCCACCATACTCACCAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVSDIT*RARLATILTSH Trigger: ATGACTGGTGAGTATGGTGGCAAGTCTGGCCCTCCAAGTGATATCACTCACACACACACATACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | GAGCAAGGCTCTTTCACTAGTATCCAACATGGGACTTaGAGTGGAGACACAAGGCTGAGCACAACATACAAC | + |
|
Preference number: 3 (lower is better) Translates to: EQGSFTSIQHGT*SGDTRLSTTYN Trigger: GTTGTATGTTGTGCTCAGCCTTGTGTCTCCACTCCAAGTCCCATGTTGGATACTAGTGAAAGAGCCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | CTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATaGCCACACCGCTCCCAGCGTGATTGGATCTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LDRKLEQVSNLL*PHRSQRDWISY Trigger: GTAAGAGATCCAATCACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR TCA 72 bp | TGTGTGTGTATGTGTGTGTGTATGTGTGTGTGTGAGTaGTATCACTTGGAGGGCCAGACTTGCCACCATACT | + |
|
Preference number: 3 (lower is better) Translates to: CVCMCVCMCVCE*YHLEGQTCHHT Trigger: AGTATGGTGGCAAGTCTGGCCCTCCAAGTGATATCACTCACACACACACATACACACACACATACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | GGTAGAGGCAGGAGAATTAAGAGTCAAAGGCCAGCCTaGTCACACAGGCTTAAAATAACACCTCCAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GRGRRIKSQRPA*SHRLKITPPKK Trigger: TTTCTTTGGAGGTGTTATTTTAAGCCTGTGTGACCAGGCTGGCCTTTGACTCTTAATTCTCCTGCCTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CCA 72 bp | CATGATAAATTCAGAAAGGACCATCTGTCAGTTTCCTaGAGACAATGCCAGGGTATTCACACAGCACCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HDKFRKDHLSVS*RQCQGIHTAPE Trigger: TTCAGGTGCTGTGTGAATACCCTGGCATTGTCTCCAGGAAACTGACAGATGGTCCTTTCTGAATTTATCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGATGCACAGTAGTCCTTCATTTCTGCTCTCATCATTCTTAGGTGGTGGATATTTTACTTCCTTTTaGGAAAGCTGTAAGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQMHSSPSFLLSSFLGGGYFTSF*ESCKGG Trigger: CCCACCCTTACAGCTTTCCAAAAAGGAAGTAAAATA...TCCACCACCTAAGAATGATGAGAGCAGAAATGAAGGACTACTGTGCATCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | TTGGAAAGCTGTAAGGGTGGGTGCTTCCATGCTGCCTaGAACTTGGTAGCACAAAACAAAAACAAACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LESCKGGCFHAA*NLVAQNKNKQT Trigger: TGTTTGTTTGTTTTTGTTTTGTGCTACCAAGTTTCAGGCAGCATGGAAGCACCCACCCTTACAGCTTTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | GGAGGAGAAGAAAGGAGGAGTTACTGCCTAAGATGCTaGATGTTCATGGACTTAACAGTGGGGATGATATTA | + |
|
Preference number: 3 (lower is better) Translates to: GGEERRSYCLRC*MFMDLTVGMIL Trigger: TAATATCATCCCCACTGTTAAGTCCATGAACATTCAGCATCTTAGGCAGTAACTCCTCCTTTCTTCTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | CAAAACAAGGGAAAGCACAAGCGCCTCTGGTTATTTTaGCTTTATCCCAGGAGAAGCTTGTTCGTTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QNKGKHKRLWLF*LYPRRSLFVHF Trigger: AAAATGAACGAACAAGCTTCTCCTGGGATAAAGTCAAAATAACCAGAGGCGCTTGTGCTTTCCCTTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATGGCCATCTTACCTAGGCTTTTaGTTTTCAGTCCCAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LKFCLDRKLEQVSNLLWPSYLGF*FSVPAP Trigger: TGGTGCTGGGACTGAAAACAAAAAGCCTAGGTAAGA...TGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| 3UTR TCA 72 bp | CAGGTATTGGAGGCCATTTATACACTGGGATATATATaGAGTGAGGATATACACACCAACACTCGGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: QVLEAIYTLGYI*SEDIHTNTRKH Trigger: ATGTTTCCGAGTGTTGGTGTGTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACCTCTGTCATTCTGAATaGCTTCTCTGTTTCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYLCHSE*LLCFTL Trigger: CAGTGTGAAACAGAGAAGCAATTCAGAATGACAGAG...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR TCA 72 bp | ATTGGAGGCCATTTATACACTGGGATATATATGAAGTaGGGATATACACACCAACACTCGGAAACATCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IGGHLYTGIYMK*GYTHQHSETSK Trigger: TTTAGATGTTTCCGAGTGTTGGTGTGTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR-3UTR CAA 90 bp | ACACTAGGGGGAAAGATAGCTTTATTCAAAGTCCACCAATTTAAATACCAATCTGAGATTCATTCAATTTaGTTAGATTCCCTGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLGGKIALFKVHQFKYQSEIHSI*LDSLKH Trigger: GTGCTTCAGGGAATCTAACAAAATTGAATGAATCTC...AGATTGGTATTTAAATTGGTGGACTTTGAATAAAGCTATCTTTCCCCCTAGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTGGGGCTGCTGCCCATaGAGGTCCCGCAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQWGCCP*RSRRCS Trigger: GGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCA...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | CTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAACCTCCTGAGGCTTCAAGAGGCTGCGAGACGCCCTTaGAGGCCTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQRPKRCSHSNLLRLQEAARRP*RPSRTP Trigger: AGGAGTGCGGGAAGGCCTTCAAGGGCGTCTCGCAGC...CTCTTGAAGCCTCAGGAGGTTGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAACCTCCTGAGGCTTCAAGAGGCTCGCCGCTGTGGATaGGCGTGTGCTCAAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLQRPKRCSHSNLLRLQEARRCG*ACAQAA Trigger: CGCTGCTTGAGCACACGCGCATCCACAGCGGCGAGC...CTCTTGAAGCCTCAGGAGGTTGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR GCA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGGATGGGCTGGGGTTCTaGGGAGCTACCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQDGLGF*GATFSS Trigger: GCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATC...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAGGCTTGTCGCCGCGGTaGATGAGCTGGTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLPFSPSFYRGQRDAPIAGLSPR*MSWWWM Trigger: CATCCACCACCAGCTCATCCACCGCGGCGACAAGCC...TGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCGCCTCTTGGGGCTGCTaGCCATGGAGGTCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLASWGC*PWRSRR Trigger: TCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGC...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | GCTACTTTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGGATGGAACACAGGGCCCCAGCGCTCACAAACTTaGGGCTTCTCATTGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ATFSCLSLGRSQGWNTGPQRSQT*GFSLVS Trigger: CGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTG...GGGCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAAAGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | AGCCTTTTGCACAGGCCTGATCTCGCAGTTGCAGTATaGAGCCCTGTGAGAAGCCTGCACCCTGGGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLLHRPDLAVAV*SPVRSLHPGQT Trigger: AGTCTGCCCAGGGTGCAGGCTTCTCACAGGGCTCAATACTGCAACTGCGAGATCAGGCCTGTGCAAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTGGAGTGCGCTGCGAGACGCCCTTaGAGGCCTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNLTNLAGKVPSLFLECAARRP*RPSRTP Trigger: AGGAGTGCGGGAAGGCCTTCAAGGGCGTCTCGCAGC...GCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGGATGGAACACAGGGCCCGAGGTCAGCACAGGATCTTGCTaGACTCTCCATTCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSCLSLGRSQGWNTGPEVSTGSC*TLHSII Trigger: GATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCT...GACCTCGGGCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | TCTTTGAACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTGGAGTGCGCTCGCCGCTGTGGATaGGCGTGTGCTCAAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLNLTNLAGKVPSLFLECARRCG*ACAQAA Trigger: CGCTGCTTGAGCACACGCGCATCCACAGCGGCGAGC...GCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTACTCCACTCTAAAGTGCTCTACATCTCTCCCTGCAGACCCCACTTTCTGGTGGTGGATGAGCTaGGAGACGCCCTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGYSTLKCSTSLPADPTFWWWMS*ETPLKA Trigger: GGCCTTCAAGGGCGTCTCGCAGCTCATCCACCACCA...GAAAGTGGGGTCTGCAGGGAGAGATGTAGAGCACTTTAGAGTGGAGTACCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAACCTCCTGAGGCTTCAAGAGCGGTGGATGAGCTGGTaGTGGATGAGCTGCGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LLQRPKRCSHSNLLRLQERWMSW*WMSCET Trigger: CGTCTCGCAGCTCATCCACCACCAGCTCATCCACCG...CTCTTGAAGCCTCAGGAGGTTGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCCCTCTGTGGACCCGCTaGTGTTGGCTGAGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLPLWTR*CWLSPE Trigger: CTCAGGGCTCAGCCAACACCAGCGGGTCCACAGAGG...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGGACAAACTACACTGAAGGTGGAGGGCACTCTGTCATTCTGAATTGCCCTTCTCCAGCCTCTTaGGGCTGCTGCCCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRTNYTEGGGHSVILNCPSPAS*GCCPWR Trigger: CCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGG...GCAATTCAGAATGACAGAGTGCCCTCCACCTTCAGTGTAGTTTGTCCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | CCAAAATGGAGACCCTCAGGTCTCTGGACTTTAACCTCTCTGCAAGATGACAGCAGCCGCACCCCACCATaGACCACCTGGTGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKWRPSGLWTLTSLQDDSSRTPP*TTWCLK Trigger: CTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCT...GCTGTCATCTTGCAGAGAGGTTAAAGTCCAGAGACCTGAGGGTCTCCATTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAACCTCCTGAGGCTTCAAGAGTCCCCTCGCTCCAGCTaGGATACCAGGTTAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQRPKRCSHSNLLRLQESPRSS*DTRLGL Trigger: CAAGCCTAACCTGGTATCCCAGCTGGAGCGAGGGGA...CTCTTGAAGCCTCAGGAGGTTGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAGATGCTCCCATAGCACTGCTGTGGATGACCTaGTGCTTGACGAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPFSPSFYRGQRDAPIALLWMT*CLTRLE Trigger: CTCCAACCTCGTCAAGCACCAGGTCATCCACAGCAG...TGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAGGCATCTCACTGCTGTaGATGACCTGGTGCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GLPFSPSFYRGQRDAPIAGISLL*MTWCLT Trigger: CGTCAAGCACCAGGTCATCCACAGCAGTGAGATGCC...TGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | CCAACCAGCATCCCAAGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTTCTCGAAGACCTaGCCGCAGCGCTCACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PTSIPSFQVFPYSLGRRQLFSKT*PQRSQT Trigger: AGTTTGTGAGCGCTGCGGCCAGGTCTTCGAGAACAA...CTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACTTGGGATGCTGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | CTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTaGGAGTGCCCAAGGGCAGCCTCCACTTTACCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTNLAGKVPSLF*ECPRAASTLPV Trigger: TACGGGTAAAGTGGAGGCTGCCCTTGGGCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | GGGCTGCCATTTTCCCCTAGCTTCTACAGAGGCCAAAGAGATGCTCCCATAGCAAGAGGGTCCTCTGTTTaGGGTCCAGAAGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLPFSPSFYRGQRDAPIARGSSV*GPEASI Trigger: AATGGAGGCTTCTGGACCTCAAACAGAGGACCCTCT...TGCTATGGGAGCATCTCTTTGGCCTCTGTAGAAGCTAGGGGAAAATGGCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR GCA 90 bp | GCTACTTTCTCCTGTCTGAGCTTGGGCAGGAGTCAGGGATGGAACACAGGGCCCACACTTTACCACACATaGGGCACACAAATGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ATFSCLSLGRSQGWNTGPTLYHT*GTQMAS Trigger: AGATGCCATTTGTGTGCCGCATGTGTGGTAAAGTGT...GGGCCCTGTGTTCCATCCCTGACTCCTGCCCAAGCTCAGACAGGAGAAAGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTACTCCACTCTAAAGTGCTCTACATCTCTCCCTGCAGACCCCACTTTCGGCATCTCACTGCTGTaGATGACCTGGTGCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGYSTLKCSTSLPADPTFGISLL*MTWCLT Trigger: CGTCAAGCACCAGGTCATCCACAGCAGTGAGATGCC...GAAAGTGGGGTCTGCAGGGAGAGATGTAGAGCACTTTAGAGTGGAGTACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTGGCTTGTCGCCGCGGTaGATGAGCTGGTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPGLSPR*MSWWWM Trigger: CATCCACCACCAGCTCATCCACCGCGGCGACAAGCC...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTACTACACCTAACTGCCTGCTGAAAACATCTAGGAACCGGAACTACCTGTGGATGCGCGTGTaGTCAAGCAGCGCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: REPTTPNCLLKTSRNRNYLWMRV*SSSAKL Trigger: CAGCTTCGCGCTGCTTGAGCACACGCGCATCCACAG...GTAGTTCCGGTTCCTAGATGTTTTCAGCAGGCAGTTAGGTGTAGTAGGTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCCTTTCCTCTGTGGGCTaGGCTTCCAGATGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLLSSVG*ASRCWL Trigger: CAGCCAACATCTGGAAGCCCAGCCCACAGAGGAAAG...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | TTAAAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATGGCCACCCGCTGGTGTTGGCTaGGCCCTGAGAGGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKFCLDRKLEQVSNLLWPPAGVG*ALRGLG Trigger: TCCGAGGCCTCTCAGGGCTCAGCCAACACCAGCGGG...TGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTTCCCCTCGCTCCAGCTaGGATACCAGGTTAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPSPRSS*DTRLGL Trigger: CAAGCCTAACCTGGTATCCCAGCTGGAGCGAGGGGA...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | CACCCCACATTAAACAAGGGAAAGGACATGGGTCATCTGTCTGTAAACTTCATGCGGTGGATGAGCTGGTaGTGGATGAGCTGCGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: HPTLNKGKDMGHLSVNFMRWMSW*WMSCET Trigger: CGTCTCGCAGCTCATCCACCACCAGCTCATCCACCG...CATGAAGTTTACAGACAGATGACCCATGTCCTTTCCCTTGTTTAATGTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | ACCGAAGCACACACAGGAGAACCCTGCCTAGGTAACTaGAGGAGCCTGCCTGTACAATCTCTAGGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TEAHTGEPCLGN*RSLPVQSLGIN Trigger: ATTGATGCCTAGAGATTGTACAGGCAGGCTCCTCAAGTTACCTAGGCAGGGTTCTCCTGTGTGTGCTTCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | TACACCCTCTGCCTGAGGAATTTTTATAAAGGATCAATTCCCCAACACTCTCATGTGTTGGCTGAGCCCTaGGAGGCCTCGGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTLCLRNFYKGSIPQHSHVLAEP*EASEGL Trigger: AAGGCCTTCCGAGGCCTCTCAGGGCTCAGCCAACAC...ATGAGAGTGTTGGGGAATTGATCCTTTATAAAAATTCCTCAGGCAGAGGGTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACCCCGCTGGTGTTGGCTaGGCCCTGAGAGGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYPAGVG*ALRGLG Trigger: TCCGAGGCCTCTCAGGGCTCAGCCAACACCAGCGGG...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | GTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTaGAACCTCACTAACCTTGCAGGGAAGGTACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFPYSLGRRQLS*NLTNLAGKVPS Trigger: TGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | TTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTaGCTATGGCCACACCGCTCCCAGCGTGATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FCLDRKLEQVSN*LWPHRSQRDWI Trigger: GATCCAATCACGCTGGGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR GCA 90 bp | TGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATGGCCACACCGCTCCAGCACAGGATCTTGCTaGACTCTCCATTCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLDRKLEQVSNLLWPHRSSTGSC*TLHSII Trigger: GATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCT...GGAGCGGTGTGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGTCTTCCCATACTCTCTTGGCAGGAGGCAGTTGTCTTTGAACCTCTGGGCTTCCAGATGTTaGCTGAGCAATGACTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFQVFPYSLGRRQLSLNLWASRC*LSNDLS Trigger: GGATAAGTCATTGCTCAGCCAACATCTGGAAGCCCA...GAGGTTCAAAGACAACTGCCTCCTGCCAAGAGAGTATGGGAAGACCTGGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | CATAGTGGTTCCTCTTCATGGAGTTTTCTGTTTAGGAGCCTTTTGCACAGGCCTTCATGGATGCGCAAGTaGCGACACAACAGCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSSSWSFLFRSLLHRPSWMRK*RHNSNL Trigger: CAAGTTGCTGTTGTGTCGCCACTTGCGCATCCATGA...AGGCCTGTGCAAAAGGCTCCTAAACAGAAAACTCCATGAAGAGGAACCACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CCA 90 bp | ACACTAGGGGGAAAGATAGCTTTATTCAAAGTCCACCAATTTAAATACCAATCTCCTCTGTGGACCCGCTaGTGTTGGCTGAGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGGKIALFKVHQFKYQSPLWTR*CWLSPE Trigger: CTCAGGGCTCAGCCAACACCAGCGGGTCCACAGAGG...AGATTGGTATTTAAATTGGTGGACTTTGAATAAAGCTATCTTTCCCCCTAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | GATAAATTCAGAAAGGACCATCTGTCAGTTTCCTGGAGACAATGCCAGGGTATTTGTCGCTTTCCTCTGTaGGCTGGGCTTCCAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKFRKDHLSVSWRQCQGICRFPL*AGLPDV Trigger: AACATCTGGAAGCCCAGCCCACAGAGGAAAGCGACA...AATACCCTGGCATTGTCTCCAGGAAACTGACAGATGGTCCTTTCTGAATTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | ACACTAGGGGGAAAGATAGCTTTATTCAAAGTCCACCAATTTAAATACCAATCTTGGTGGTGGATGAGCTaGGAGACGCCCTTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGGKIALFKVHQFKYQSWWWMS*ETPLKA Trigger: GGCCTTCAAGGGCGTCTCGCAGCTCATCCACCACCA...AGATTGGTATTTAAATTGGTGGACTTTGAATAAAGCTATCTTTCCCCCTAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAACCTCACTAACCTTGCAGGGAAGGTACCATCACTCTTCTTGGAGTGCGCGATTCTGGAGTGTTaGTACCTTACAATGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNLTNLAGKVPSLFLECAILEC*YLTMGF Trigger: AAATCCCATTGTAAGGTACCAACACTCCAGAATCGC...GCACTCCAAGAAGAGTGATGGTACCTTCCCTGCAAGGTTAGTGAGGTTCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACCCACCATGCACCACCTaGTGCTTGAAGAGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYPPCTT*CLKRLA Trigger: GGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGG...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | CACCCCACATTAAACAAGGGAAAGGACATGGGTCATCTGTCTGTAAACTTCATGGGTTTCTCTCTGCTGTaGATAATCCGGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HPTLNKGKDMGHLSVNFMGFSLL*IIRCLM Trigger: CATCAAACACCGGATTATCCACAGCAGAGAGAAACC...CATGAAGTTTACAGACAGATGACCCATGTCCTTTCCCTTGTTTAATGTGGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR TCA 90 bp | AACAGGTATTGGAGGCCATTTATACACTGGGATATATATGAAGTGAGGATATACAGAGGGTCCTCTGTTTaGGGTCCAGAAGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NRYWRPFIHWDIYEVRIYRGSSV*GPEASI Trigger: AATGGAGGCTTCTGGACCTCAAACAGAGGACCCTCT...GTATATCCTCACTTCATATATATCCCAGTGTATAAATGGCCTCCAATACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTTGAAAACTTCCACCTCATGATAAATTCAGAAAGGACCATCTGTCAGCTGCTGTGGATGACCTaGTGCTTGACGAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNVENFHLMINSERTICQLLWMT*CLTRLE Trigger: CTCCAACCTCGTCAAGCACCAGGTCATCCACAGCAG...CTGACAGATGGTCCTTTCTGAATTTATCATGAGGTGGAAGTTTTCAACATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| 3UTR CAA 72 bp | ACAAAACAAGGGAAAGCACAAGCGCCTCTGGTTATTTaGACTTTATCCCAGGAGAAGCTTGTTCGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQGKAQAPLVI*TLSQEKLVRSF Trigger: AAATGAACGAACAAGCTTCTCCTGGGATAAAGTCAAAATAACCAGAGGCGCTTGTGCTTTCCCTTGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATGGCCAACACTTTACCACACATaGGGCACACAAATGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKFCLDRKLEQVSNLLWPTLYHT*GTQMAS Trigger: AGATGCCATTTGTGTGCCGCATGTGTGGTAAAGTGT...TGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTGCCTTGATAGGAAATTGGAGCAGGTTAGTAACTTGCTATGGCCAGGTTTCTCTCTGCTGTaGATAATCCGGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKFCLDRKLEQVSNLLWPGFSLL*IIRCLM Trigger: CATCAAACACCGGATTATCCACAGCAGAGAGAAACC...TGGCCATAGCAAGTTACTAACCTGCTCCAATTTCCTATCAAGGCAGAATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR TCA 90 bp | ATTATTTTCACAGCCTCATCTAGACTGGTGTTTTACCAAAGTCTGAGTTCTATAGTAATAGTTCAAAGCTaGCTTTGGTGGCAAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFTASSRLVFYQSLSSIVIVQS*LWWQMP Trigger: AGGCATTTGCCACCAAAGTCAGCTTTGAACTATTAC...TATAGAACTCAGACTTTGGTAAAACACCAGTCTAGATGAGGCTGTGAAAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTTGAAAACTTCCACCTCATGATAAATTCAGAAAGGACCATCTGTCAGTTGAAGTCAAAGTCTTaGTCTTTATCCTATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNVENFHLMINSERTICQLKSKS*SLSYSQ Trigger: CTGGGAATAGGATAAAGACCAAGACTTTGACTTCAA...CTGACAGATGGTCCTTTCTGAATTTATCATGAGGTGGAAGTTTTCAACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS-3UTR CCA 90 bp | ATTATTTTCACAGCCTCATCTAGACTGGTGTTTTACCAAAGTCTGAGTTCTATATTGAAGTCAAAGTCTTaGTCTTTATCCTATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIFTASSRLVFYQSLSSILKSKS*SLSYSQ Trigger: CTGGGAATAGGATAAAGACCAAGACTTTGACTTCAA...TATAGAACTCAGACTTTGGTAAAACACCAGTCTAGATGAGGCTGTGAAAATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS GCA 90 bp | CTTGGGGCTGCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTaGGCTGGAATCCCTTCCCTCGAGTGCGGTGCTGGAGCCGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LGAAAHGGPADAPGA*AGIPSLECGAGAAP Trigger: GGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 90 bp | GGCTGCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTGCGCTaGAATCCCTTCCCTCGAGTGCGGTGCTGGAGCCGCACCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GCCPWRSRRCSRSLR*NPFPRVRCWSRTPP Trigger: TGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 90 bp | TGGAATCCCTTCCCTCGAGTGCGGTGCTGGAGCCGCACCCCACCATaGACCACCTGGTGCTTGAAGAGGTTGGCCCGGCGACCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WNPFPRVRCWSRTPP*TTWCLKRLARRPKA Trigger: GGCCTTTGGTCGCCGGGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 90 bp | CCTTCTCCAGCCTCTTGGGGCTGCTGCCCATGGAGGTCCCGCAGATaGTCCAGGAGCTTGCGCTGGAATCCCTTCCCTCGAGTGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPASWGCCPWRSRR*SRSLRWNPFPRVRC Trigger: GCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 90 bp | ATGGGCTGGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTTGGGGCTaGTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGWGSAELPSPASWG*CPWRSRRCSRSLRW Trigger: CCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 90 bp | GGCTGGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTTGGGGCTGCTaGCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTGCGCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GWGSAELPSPASWGC*PWRSRRCSRSLRWN Trigger: ATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 90 bp | GTGTCGATGGGCTGGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTTaGGGCTGCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSMGWGSAELPSPAS*GCCPWRSRRCSRSL Trigger: CAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATCGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 90 bp | CCGCAGCGCTCACAAACTTGGGGCTTCTCATTGGTGTCGATGGGCTaGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTTGGGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRSQTWGFSLVSMG*GSAELPSPASWGCC Trigger: GCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 90 bp | TGGATGCGCAAGTGGCGACACAACAGCAACTTGTTCTCGAAGACCTaGCCGCAGCGCTCACAAACTTGGGGCTTCTCATTGGTGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WMRKWRHNSNLFSKT*PQRSQTWGFSLVSM Trigger: CATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGGTCTTCGAGAACAAGTTGCTGTTGTGTCGCCACTTGCGCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CAA 90 bp | GATAAATTCAGAAAGGACCATCTGTCAGTTTCCTGGAGACAATGCCAGGGTATTTGGTGCTTGAAGAGGTaGGCCCGGCGACCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DKFRKDHLSVSWRQCQGIWCLKR*ARRPKA Trigger: GGCCTTTGGTCGCCGGGCCAACCTCTTCAAGCACCA...AATACCCTGGCATTGTCTCCAGGAAACTGACAGATGGTCCTTTCTGAATTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 90 bp | TACACGAAAACTACACTGCCTTCGCTGTCGCTTTCCTCTGTGGGCTaGGCTTCCAGATGTTGGCTGAGCAATGACTTATCCTCCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: YTKTTLPSLSLSSVG*ASRCWLSNDLSSKT Trigger: AGTTTTGGAGGATAAGTCATTGCTCAGCCAACATCTGGAAGCCCAGCCCACAGAGGAAAGCGACAGCGAAGGCAGTGTAGTTTTCGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 90 bp | AGTCAAAGTCTTGGTCTTTATCCTATTCCCAGCACAGGATCTTGCTaGACTCTCCATTCCATCATCTCTAATCCAGGGCTTCTCCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLGLYPIPSTGSC*TLHSIISNPGLLPS Trigger: CGAGGGGAGAAGCCCTGGATTAGAGATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGAATAGGATAAAGACCAAGACTTTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
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| CDS-3UTR CAA 90 bp | CACCCCACATTAAACAAGGGAAAGGACATGGGTCATCTGTCTGTAAACTTCATGTCCCAGCACAGGATCTaGCTGCACTCTCCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPTLNKGKDMGHLSVNFMSQHRI*LHSPFH Trigger: ATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGA...CATGAAGTTTACAGACAGATGACCCATGTCCTTTCCCTTGTTTAATGTGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CAA 90 bp | ACACTAGGGGGAAAGATAGCTTTATTCAAAGTCCACCAATTTAAATACCAATCTTCCCAGCACAGGATCTaGCTGCACTCTCCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLGGKIALFKVHQFKYQSSQHRI*LHSPFH Trigger: ATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGA...AGATTGGTATTTAAATTGGTGGACTTTGAATAAAGCTATCTTTCCCCCTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| CDS-3UTR CAA 90 bp | AGAGAACCTACTACACCTAACTGCCTGCTGAAAACATCTAGGAACCGGAACTACCGAAAAGTTTTGGTTTaGAAGTCAAAGTCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: REPTTPNCLLKTSRNRNYRKVLV*KSKSWS Trigger: AGACCAAGACTTTGACTTCAAAACCAAAACTTTTCG...GTAGTTCCGGTTCCTAGATGTTTTCAGCAGGCAGTTAGGTGTAGTAGGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CAA 90 bp | AAAAATGTTGAAAACTTCCACCTCATGATAAATTCAGAAAGGACCATCTGTCAGTGGATAATCCGGTGTTaGATGAGATTGAAGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KNVENFHLMINSERTICQWIIRC*MRLKLR Trigger: CCGCAGCTTCAATCTCATCAAACACCGGATTATCCA...CTGACAGATGGTCCTTTCTGAATTTATCATGAGGTGGAAGTTTTCAACATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS-3UTR CAA 90 bp | ATTATTTTCACAGCCTCATCTAGACTGGTGTTTTACCAAAGTCTGAGTTCTATATGGATAATCCGGTGTTaGATGAGATTGAAGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IIFTASSRLVFYQSLSSIWIIRC*MRLKLR Trigger: CCGCAGCTTCAATCTCATCAAACACCGGATTATCCA...TATAGAACTCAGACTTTGGTAAAACACCAGTCTAGATGAGGCTGTGAAAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| CDS-3UTR CAA 90 bp | ACACTAGGGGGAAAGATAGCTTTATTCAAAGTCCACCAATTTAAATACCAATCTCGAAAAGTTTTGGTTTaGAAGTCAAAGTCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLGGKIALFKVHQFKYQSRKVLV*KSKSWS Trigger: AGACCAAGACTTTGACTTCAAAACCAAAACTTTTCG...AGATTGGTATTTAAATTGGTGGACTTTGAATAAAGCTATCTTTCCCCCTAGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
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| CDS-3UTR CAA 90 bp | AAAAATGTTGAAAACTTCCACCTCATGATAAATTCAGAAAGGACCATCTGTCAGCTCTTCCGAAAAGTTTaGGTTTTGAAGTCAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNVENFHLMINSERTICQLFRKV*VLKSKS Trigger: AGACTTTGACTTCAAAACCAAAACTTTTCGGAAGAG...CTGACAGATGGTCCTTTCTGAATTTATCATGAGGTGGAAGTTTTCAACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS TCA 72 bp | GCTGGAGCCGCACCCCACCATGCACCACCTGGTGCTTaGAGAGGTTGGCCCGGCGACCAAAGGCCCGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGAAPHHAPPGA*RGWPGDQRPGR Trigger: GCGGCCGGGCCTTTGGTCGCCGGGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 72 bp | GTGCGGTGCTGGAGCCGCACCCCACCATGCACCACCTaGTGCTTGAAGAGGTTGGCCCGGCGACCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRCWSRTPPCTT*CLKRLARRPKA Trigger: GGCCTTTGGTCGCCGGGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 72 bp | CGCACCCCACCATGCACCACCTGGTGCTTGAAGAGGTaGGCCCGGCGACCAAAGGCCCGGCCGCATTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPPCTTWCLKR*ARRPKARPHSL Trigger: CAGCGAATGCGGCCGGGCCTTTGGTCGCCGGGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 90 bp | TCTTGGGGCTGCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTaGCGCTGGAATCCCTTCCCTCGAGTGCGGTGCTGGAGCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SWGCCPWRSRRCSRS*RWNPFPRVRCWSRT Trigger: GGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | TTCCCTCGAGTGCGGTGCTGGAGCCGCACCCCACCATaGACCACCTGGTGCTTGAAGAGGTTGGCCCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: FPRVRCWSRTPP*TTWCLKRLARR Trigger: TCGCCGGGCCAACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | AGGAGCTTGCGCTGGAATCCCTTCCCTCGAGTGCGGTaGTGGAGCCGCACCCCACCATGCACCACCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLRWNPFPRVR*WSRTPPCTTWC Trigger: GCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | GCTCCAGGAGCTTGCGCTGGAATCCCTTCCCTCGAGTaGGGTGCTGGAGCCGCACCCCACCATGCACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: APGACAGIPSLE*GAGAAPHHAPP Trigger: AGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | GCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTTaGGCTGGAATCCCTTCCCTCGAGTGCGGTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAHGGPADAPGA*AGIPSLECGAG Trigger: TCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | GCCTCTTGGGGCTGCTGCCCATGGAGGTCCCGCAGATaGTCCAGGAGCTTGCGCTGGAATCCCTTCCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ASWGCCPWRSRR*SRSLRWNPFPR Trigger: TCGAGGGAAGGGATTCCAGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | GGTTCTGCGGAGCTACCTTCTCCAGCCTCTTGGGGCTaGTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSAELPSPASWG*CPWRSRRCSRS Trigger: GCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 72 bp | AGCTTGCGCTGGAATCCCTTCCCTCGAGTGCGGTGCTaGAGCCGCACCCCACCATGCACCACCTGGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRWNPFPRVRC*SRTPPCTTWCL Trigger: CAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCCAGCGCAAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 90 bp | GGTGTCGATGGGCTGGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTaGGGGCTGCTGCCCATGGAGGTCCCGCAGATGCTCCAGGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GVDGLGFCGATFSSL*GLLPMEVPQMLQEL Trigger: AAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATCGACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 72 bp | CCTGGCCGCAGCGCTCACAAACTTGGGGCTTCTCATTaGTGTCGATGGGCTGGGGTTCTGCGGAGCTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSAHKLGASH*CRWAGVLRSYL Trigger: AAGGTAGCTCCGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 72 bp | ACCTGGCCGCAGCGCTCACAAACTTGGGGCTTCTCATaGGTGTCGATGGGCTGGGGTTCTGCGGAGCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: TWPQRSQTWGFS*VSMGWGSAELP Trigger: AGGTAGCTCCGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 90 bp | TTCTCGAAGACCTGGCCGCAGCGCTCACAAACTTGGGGCTTCTCATaGGTGTCGATGGGCTGGGGTTCTGCGGAGCTACCTTCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSKTWPQRSQTWGFS*VSMGWGSAELPSPA Trigger: GGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGGTCTTCGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 72 bp | CTTGTTCTCGAAGACCTGGCCGCAGCGCTCACAAACTaGGGGCTTCTCATTGGTGTCGATGGGCTGGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVLEDLAAALTN*GLLIGVDGLGF Trigger: GAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGGTCTTCGAGAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS GCA 72 bp | GACCGTGGGGCTTCTCAGCATACACGAAAACTACACTaGCTTCGCTGTCGCTTTCCTCTGTGGGCTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRGASQHTRKLH*LRCRFPLWAGL Trigger: AAGCCCAGCCCACAGAGGAAAGCGACAGCGAAGGCAGTGTAGTTTTCGTGTATGCTGAGAAGCCCCACGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 72 bp | TCACAAACTTGGGGCTTCTCATTGGTGTCGATGGGCTaGGGTTCTGCGGAGCTACCTTCTCCAGCCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQTWGFSLVSMG*GSAELPSPASW Trigger: CCAAGAGGCTGGAGAAGGTAGCTCCGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CAA 72 bp | TCGTCATGGATGCGCAAGTGGCGACACAACAGCAACTaGTTCTCGAAGACCTGGCCGCAGCGCTCACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: SSWMRKWRHNSN*FSKTWPQRSQT Trigger: AGTTTGTGAGCGCTGCGGCCAGGTCTTCGAGAACAAGTTGCTGTTGTGTCGCCACTTGCGCATCCATGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS TCA 72 bp | CGCTTTCCTCTGTGGGCTGGGCTTCCAGATGTTGGCTaGGCAATGACTTATCCTCCAAAACTGAGGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RFPLWAGLPDVG*AMTYPPKLRCS Trigger: CGAGCACCTCAGTTTTGGAGGATAAGTCATTGCTCAGCCAACATCTGGAAGCCCAGCCCACAGAGGAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
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| CDS CCA 72 bp | GCGCCTGAACACTTTACCACACATGCGGCACACAAATaGCATCTCACTGCTGTGGATGACCTGGTGCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: APEHFTTHAAHK*HLTAVDDLVLD Trigger: GTCAAGCACCAGGTCATCCACAGCAGTGAGATGCCATTTGTGTGCCGCATGTGTGGTAAAGTGTTCAGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
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| CDS CCA 72 bp | ACTACACTGCCTTCGCTGTCGCTTTCCTCTGTGGGCTaGGCTTCCAGATGTTGGCTGAGCAATGACTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: TTLPSLSLSSVG*ASRCWLSNDLS Trigger: GGATAAGTCATTGCTCAGCCAACATCTGGAAGCCCAGCCCACAGAGGAAAGCGACAGCGAAGGCAGTGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS CAA 72 bp | TTCTCCCCTCGCTCCAGCTGGGATACCAGGTTAGGCTaGGAGAAAGCAAATCCTACTGACACCAGATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSPRSSWDTRLG*EKANPTDTRWL Trigger: CAGCCATCTGGTGTCAGTAGGATTTGCTTTCTCCAAGCCTAACCTGGTATCCCAGCTGGAGCGAGGGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
||
| CDS TCA 72 bp | AGGAGGGGAGCGTGTTCTGCAGTAATAGTTCAAAGCTaGCTTTGGTGGCAAATGCCTAGTCCAGCACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRGACSAVIVQS*LWWQMPSPALQ Trigger: CTGGAGTGCTGGACTAGGCATTTGCCACCAAAGTCAGCTTTGAACTATTACTGCAGAACACGCTCCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086470.3 |
||
| CDS GCA 72 bp | CTTGGTCTTTATCCTATTCCCAGCACAGGATCTTGCTaGACTCTCCATTCCATCATCTCTAATCCAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLYPIPSTGSC*TLHSIISNPGL Trigger: AAGCCCTGGATTAGAGATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGAATAGGATAAAGACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
||
| CDS GCA 72 bp | AGTCTTGGTCTTTATCCTATTCCCAGCACAGGATCTTaGTGCACTCTCCATTCCATCATCTCTAATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGLYPIPSTGS*CTLHSIISNPG Trigger: CCCTGGATTAGAGATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGAATAGGATAAAGACCAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
||
| CDS CAA 72 bp | AAAACTGAGGTGCTCGAAATAACAGGCTTCTGTTTCTaGTCATCTTCGTCGTCATGGATGCGCAAGTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: KTEVLEITGFCF*SSSSSWMRKWR Trigger: TCGCCACTTGCGCATCCATGACGACGAAGATGACAAGAAACAGAAGCCTGTTATTTCGAGCACCTCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033740.12 |
||
| CDS TCA 72 bp | TGTTGGTACCTTACAATGGGATTTGGCCTGAAATCGTaGGGACGTCTCTGCAATGAGGATCGTGAGGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: CWYLTMGFGLKS*GRLCNEDREVF Trigger: AAATACCTCACGATCCTCATTGCAGAGACGTCCTCACGATTTCAGGCCAAATCCCATTGTAAGGTACCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033740.12 ENSMUST00000086470.3 |
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