Pregenerated sensors for ZFP91 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024695Ensembl transcript IDs: ENSMUST00000038627.9
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAAGCAAGTGAGCACCATTAAGAGCATTATGGAGGTTCAGGAGTaGGGGGAACTGAGGTGCTGGGATCCATTGAAAGGGAGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SKQVSTIKSIMEVQE*GELRCWDPLKGREV Trigger: CACCTCCCTCCCTTTCAATGGATCCCAGCACCTCAGTTCCCCCCACTCCTGAACCTCCATAATGCTCTTAATGGTGCTCACTTGCTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR CCA 90 bp | CAGAGCCCTATCTTTCAGCCAGAAACAGAGGTCAGTCCCCTCTCTTaGGAGCCTGCTTCCAAGCAAGTGAGCACCATTAAGAGCATTATG | + |
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Preference number: 1 (lower is better) Translates to: QSPIFQPETEVSPLS*EPASKQVSTIKSIM Trigger: CATAATGCTCTTAATGGTGCTCACTTGCTTGGAAGCAGGCTCCCAAGAGAGGGGACTGACCTCTGTTTCTGGCTGAAAGATAGGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 90 bp | TGTTCAAAGTGCAAATTTCTGCCATTAGCCTGGGACTTTTCTCACTaGCACAGAGCCCTATCTTTCAGCCAGAAACAGAGGTCAGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: CSKCKFLPLAWDFSH*HRALSFSQKQRSVP Trigger: GGGGACTGACCTCTGTTTCTGGCTGAAAGATAGGGCTCTGTGTCAGTGAGAAAAGTCCCAGGCTAATGGCAGAAATTTGCACTTTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 90 bp | TATAGGCTGAGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCTGCTaGTGGCTGGAACCTAGCATGTTGCTGCTTTTTCATCAACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: YRLRKRRFANEQEVC*WLEPSMLLLFHQPF Trigger: GAAAGGTTGATGAAAAAGCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTTTCTCAGCCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 90 bp | AGTTATAGGCTGAGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCTaGTGCTGGCTGGAACCTAGCATGTTGCTGCTTTTTCATCAACCT | + |
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Preference number: 1 (lower is better) Translates to: SYRLRKRRFANEQEV*CWLEPSMLLLFHQP Trigger: AGGTTGATGAAAAAGCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTTTCTCAGCCTATAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 90 bp | TATTATGAGTTCAAAGCTGATCCAGAGCACATCAGAGTTATAGGCTaGGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCTGCTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: YYEFKADPEHIRVIG*EKGDLPMSRKSAAG Trigger: GCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTTTCTCAGCCTATAACTCTGATGTGCTCTGGATCAGCTTTGAACTCATAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 90 bp | TTTGTTCTCAAACTCTTATTTTTCCCAATAGTCATCATGTGTTGCTaGCAACAACTGGCCCAGTCTTCAATGGCTGATTCTGAAGTACAC | + |
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Preference number: 1 (lower is better) Translates to: FVLKLLFFPIVIMCC*QQLAQSSMADSEVH Trigger: GTGTACTTCAGAATCAGCCATTGAAGACTGGGCCAGTTGTTGTCAGCAACACATGATGACTATTGGGAAAAATAAGAGTTTGAGAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCAATGAGCAGGAAGTCTaGTGCTGGCTGGAACCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSNEQEV*CWLEPS Trigger: GCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATT...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCTGTTGTGATCCACAATaGAAAGAGCAGGCCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSCCDPQ*KEQALQ Trigger: CTGAAGGGCCTGCTCTTTGCATTGTGGATCACAACA...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTCAAGGAGCCCTAAAGTaGCAAGTCAAGCTGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAQGALK*QVKLPA Trigger: GGCTGGCAGCTTGACTTGGCACTTTAGGGCTCCTTG...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGTCAGTCCCCTCTCTTaGGAGCCTGCTTCCAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAVSPLS*EPASKQ Trigger: TTGCTTGGAAGCAGGCTCCCAAGAGAGGGGACTGAC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGATGGAGGTTCAGGAGTaGGGGGAACTGAGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMMEVQE*GELRCW Trigger: CCAGCACCTCAGTTCCCCCCACTCCTGAACCTCCAT...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTAAGGAGATTTGCCAATaGGCAGGAAGTCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAKEICQ*AGSLLL Trigger: CAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTT...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTTCTGCACTGTCCCAGTaGCCAAAGTCTTCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNASALSQ*PKSSFA Trigger: TGCAAAGGAAGACTTTGGGCACTGGGACAGTGCAGA...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGGGGGAGTTCAGGGAATaGGGATGGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMGEFRE*GWCVCV Trigger: CACACACACACACCATCCCCATTCCCTGAACTCCCC...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGTTTTAACAGCATCCTaGCAAGGAGCCCTAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAVLTAS*QGALKC Trigger: GCACTTTAGGGCTCCTTGGCAGGATGCTGTTAAAAC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGGGGTGAGAGATGTGTaGTGTTTTAACAGCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAGVRDV*CFNSIL Trigger: CAGGATGCTGTTAAAACAGCACACATCTCTCACCCC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGAAGTCTGCTGCTGGCTaGAACCTAGCATGTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMKSAAG*NLACCC Trigger: GCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTT...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGCAGGAAGTCTGCTGCTaGCTGGAACCTAGCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMQEVCC*LEPSML Trigger: CAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTG...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGTAATGGAAGAGGGGTaGGAGATGTGTGCTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAVMEEG*EMCAVL Trigger: TAAAACAGCACACATCTCTCACCCCTCTTCCATTAC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGAGTGCCAAGTCAAGCTaGCAGCCTCCGGAAAATAGA | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMSAKSS*QPPENR Trigger: TCTATTTTCCGGAGGCTGGCAGCTTGACTTGGCACT...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGGTAAGTGTTGGTTGTTaGAGTGGGAAGAAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMVSVGC*SGKKPE Trigger: CTCTGGCTTCTTCCCACTGCAACAACCAACACTTAC...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTATCAGAGTTATAGGCTaGGAAAAAGGAGATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAIRVIG*EKGDLP Trigger: TGGCAAATCTCCTTTTTCTCAGCCTATAACTCTGAT...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTTTTAAATACAAAGTCTaGACTGTCCCAGTGCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAFKYKV*TVPVPK Trigger: TTTGGGCACTGGGACAGTGCAGACTTTGTATTTAAA...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTTGGAACCTAGCATGTTaGTGCTTTTTCATCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAWNLAC*CFFINL Trigger: AAGGTTGATGAAAAAGCAGCAACATGCTAGGTTCCA...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGTTTGAGGGTAAGTGTTaGTTGTTGCAGTGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: DFPLINKESQVPQHKTHMFEGKC*LLQWEE Trigger: TTCTTCCCACTGCAACAACCAACACTTACCCTCAAA...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTTACTTTAAAGGCCACTaGAGAACTATGATTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDLDQHSSSPQNSCISNAYFKGH*RTMILE Trigger: CTCTAAAATCATAGTTCTCCAGTGGCCTTTAAAGTA...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | CTGAACAGGTACAAGGGAGGTCCAAGTGCTCTATGCTaGTGTTTTCTCTGCTCATTCCCAGGACTCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LNRYKGGPSALC*CFLCSFPGLPA Trigger: GGCTGGGAGTCCTGGGAATGAGCAGAGAAAACATCAGCATAGAGCACTTGGACCTCCCTTGTACCTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | TCAGTCCCCTCTCTTGGGAGCCTGCTTCCAAGCAAGTaGGCACCATTAAGAGCATTATGGAGGTTCAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SVPSLGSLLPSK*APLRALWRFRS Trigger: ACTCCTGAACCTCCATAATGCTCTTAATGGTGCTCACTTGCTTGGAAGCAGGCTCCCAAGAGAGGGGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | GAGTTCAGGGAATGGGGATGGTGTGTGTGTGTGTTGTaGTCCACAATGCAAAGAGCAGGCCCTTCAGTTATT | + |
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Preference number: 3 (lower is better) Translates to: EFREWGWCVCVL*STMQRAGPSVI Trigger: AATAACTGAAGGGCCTGCTCTTTGCATTGTGGATCACAACACACACACACACCATCCCCATTCCCTGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | TGCAAATTTCTGCCATTAGCCTGGGACTTTTCTCACTaGCACAGAGCCCTATCTTTCAGCCAGAAACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: CKFLPLAWDFSH*HRALSFSQKQR Trigger: CCTCTGTTTCTGGCTGAAAGATAGGGCTCTGTGTCAGTGAGAAAAGTCCCAGGCTAATGGCAGAAATTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 72 bp | CTGAGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCTaGTGCTGGCTGGAACCTAGCATGTTGCTGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: LRKRRFANEQEV*CWLEPSMLLLF Trigger: AAAAAGCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTTTCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 72 bp | AGGCCACTGGAGAACTATGATTTTAGAGGCTGGCTGTaGTTCTTCAACTCTAAGCCTTGCCTTCAAAGTACC | + |
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Preference number: 3 (lower is better) Translates to: RPLENYDFRGWL*FFNSKPCLQST Trigger: GGTACTTTGAAGGCAAGGCTTAGAGTTGAAGAAGCACAGCCAGCCTCTAAAATCATAGTTCTCCAGTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 72 bp | AGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCTGCTaGTGGCTGGAACCTAGCATGTTGCTGCTTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: RKRRFANEQEVC*WLEPSMLLLFH Trigger: ATGAAAAAGCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR GCA 72 bp | CAAATCTATGCAATGTACCAAGGTCAACTGCAACTCTaGAGGGCAGAAAAGCCTGTCTTCATGCCTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: QIYAMYQGQLQL*RAEKPVFMPFL Trigger: GAGAAAAGGCATGAAGACAGGCTTTTCTGCCCTGCAGAGTTGCAGTTGACCTTGGTACATTGCATAGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR CCA 72 bp | AAAAGGAGATTTGCCAATGAGCAGGAAGTCTGCTGCTaGCTGGAACCTAGCATGTTGCTGCTTTTTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: KRRFANEQEVCC*LEPSMLLLFHQ Trigger: TTGATGAAAAAGCAGCAACATGCTAGGTTCCAGCCAGCAGCAGACTTCCTGCTCATTGGCAAATCTCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CAA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGGTAAGTGTTGGTTGTaGCAGTGGGAAGAAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LDLDQHSSSPQNSCISNAGKCWL*QWEEAR Trigger: TCTGGCTTCTTCCCACTGCAACAACCAACACTTACC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | TTCAAAGCTGATCCAGAGCACATCAGAGTTATAGGCTaGGAAAAAGGAGATTTGCCAATGAGCAGGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: FKADPEHIRVIG*EKGDLPMSRKS Trigger: AGACTTCCTGCTCATTGGCAAATCTCCTTTTTCTCAGCCTATAACTCTGATGTGCTCTGGATCAGCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR-3UTR CAA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGGAGGGTAAGTGTTGGTaGTTGCAGTGGGAAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: DFPLINKESQVPQHKTHMEGKCW*LQWEEA Trigger: GGCTTCTTCCCACTGCAACAACCAACACTTACCCTC...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR TCA 72 bp | GTAAGACCTCACTTAGGTTGTTGGTATATAGTTAGTTaGTTTTCTTCCTCTGAACAGGTACAAGGGAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: VRPHLGCWYIVS*FSSSEQVQGRS Trigger: GGACCTCCCTTGTACCTGTTCAGAGGAAGAAAATCAACTAACTATATACCAACAACCTAAGTGAGGTCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCCCCTCAGCACGCGGCTaGTCGCGGTCTCTGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSPSARG*SRSLQA Trigger: CGCCTGCAGAGACCGCGAGCAGCCGCGTGCTGAGGG...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR TCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGGACTCTTCTTGCCCTaGGCAGGAGACGGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSGLFLP*AGDGGF Trigger: GAAGCCCCCGTCTCCTGCTCAGGGCAAGAAGAGTCC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGTCGCGGACTCTTCTTaGCCTGAGCAGGAGACGGGG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSVADSS*PEQETG Trigger: CCCCGTCTCCTGCTCAGGGCAAGAAGAGTCCGCGAC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR TCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGTTGTTTCTGGAGCCTaGAGAGTCGCCCACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSVVSGA*RVAHRR Trigger: CCTCCTGTGGGCGACTCTTCAGGCTCCAGAAACAAC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR TCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGCACTCTCCAGCTGTTaGGTTTCCCAAGGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSALSSC*VSQGLR Trigger: CCTGAGCCCTTGGGAAACTCAACAGCTGGAGAGTGC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTCCCCCTTCCTGGTCCTaGTGCTCCGGGGATCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNAPPSWS*CSGDRG Trigger: GCCGCGATCCCCGGAGCAGCAGGACCAGGAAGGGGG...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGGCTGCCAGAGCTTCTaGAATCAGCACCTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSGCQSF*NQHLRV Trigger: CACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCCAGTGCCCCCACTGCTaGCACTTCCCACAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSQCPHC*HFPQRS Trigger: AGATCTTTGTGGGAAGTGGCAGCAGTGGGGGCACTG...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGCGGGAGGCCTGTTGCTaGGGCTGCTCCTCCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMREACC*GCSSAG Trigger: GCCGGCGGAGGAGCAGCCCCAGCAACAGGCCTCCCG...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGGCCTGTTGCTGGGGCTaGTCCTCCGCCGGCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMACCWG*SSAGGD Trigger: ATCCCCGCCGGCGGAGGAGCAGCCCCAGCAACAGGC...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGCGCGGGCTGATGCCCTaGGCCGTCGGGAGGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMRGLMP*AVGRPV Trigger: AACAGGCCTCCCGACGGCCCAGGGCATCAGCCCGCG...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCCGCAGAAGTTGTTTCTaGAGCCTGAAGAGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSRRSCF*SLKSRP Trigger: TGGGCGACTCTTCAGGCTCCAGAAACAACTTCTGCG...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGCCTTCCTGGTCCTGCTaGTCCGGGGATCGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMPSWSC*SGDRGS Trigger: GGAGCCGCGATCCCCGGAGCAGCAGGACCAGGAAGG...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTGGCGCCCGCATTGGCTaGCAGAGCTTCTGCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNAGARIG*QSFCNQ Trigger: CTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCC...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGCTTTTTGCTTTGTGTaGCACTACACTGTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSAFCFV*HYTVLL Trigger: AAGAAGGACAGTGTAGTGGCACACAAAGCAAAAAGC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGAAGCCCCTGACCATCTaGAGGCTGTGTCAGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMKPLTI*RLCQGL Trigger: GAGCCCCTGACACAGCCTGCAGATGGTCAGGGGCTT...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR TCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTTCCCTCTGGTCTGTATaGTGCTTTGCATGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNASLWSV*CFACRR Trigger: TCTGCGGCATGCAAAGCATCATACAGACCAGAGGGA...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTCTGTGTCAGGGGCTCTaGGTTAGTGCCCAAGATATC | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNALCQGL*VSAQDI Trigger: GATATCTTGGGCACTAACCCAGAGCCCCTGACACAG...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCTTTTTCAGCAAATGCTaGTATTTAATGTGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSFFSKC*YLMWCC Trigger: GCAGCACCACATTAAATACCAGCATTTGCTGAAAAA...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTCTCAGGGTGGCTTTTTaGTTTGTGTGCCACTACACT | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNALRVAF*FVCHYT Trigger: AGTGTAGTGGCACACAAAGCAAAAAGCCACCCTGAG...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCAGACTGATGTTCTTCTaGAACATCATAATCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSRLMFF*NIIIKL Trigger: CAACTTGATTATGATGTTCCAGAAGAACATCAGTCT...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGATCAGCACCTCAGGGTaGCTTTTTGCTTTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: DFPLINKESQVPQHKTHMISTSG*LFALCA Trigger: GGCACACAAAGCAAAAAGCCACCCTGAGGTGCTGAT...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTCTGGTAGAAGGAGTCTaGATCATGTTTCTTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNALVEGV*IMFLHV Trigger: CACATGAAGAAACATGATGCAGACTCCTTCTACCAG...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTAGTTTTTCTATACACTaGAGTCGCGGACTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNASFSIH*SRGLFL Trigger: CAAGAAGAGTCCGCGACTCCAGTGTATAGAAAAACT...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| 3UTR CAA 72 bp | GAGTTTACTCTTAACCAAATCTCTAGAACTTTTAGATaGTGTTCCTTCATGAATGACAGGGTCCGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EFTLNQISRTFR*CSFMNDRVRSS Trigger: GGAAGACCGGACCCTGTCATTCATGAAGGAACACAATCTAAAAGTTCTAGAGATTTGGTTAAGAGTAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CCA 90 bp | TTAGACCTTGACCAACATTCCTCATCCCCTCAAAATTCTTGTATCTCAAATGCTAAGTTGATCAGTAATTaGTTCTGTCTTGCAGACGAG | + |
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Preference number: 4 (lower is better) Translates to: LDLDQHSSSPQNSCISNAKLISN*FCLADE Trigger: CTCGTCTGCAAGACAGAACCAATTACTGATCAACTT...AGCATTTGAGATACAAGAATTTTGAGGGGATGAGGAATGTTGGTCAAGGTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 90 bp | CGCCGCGCCGGGCCGGAGCTCCTCCGAAGCCGCGTCGGCCGCCGCTaGTGGGCCCCCTTCCTGGTCCTGCTGCTCCGGGGATCGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RRAGPELLRSRVGRR*WAPFLVLLLRGSRL Trigger: GAGCCGCGATCCCCGGAGCAGCAGGACCAGGAAGGGGGCCCAGCAGCGGCGGCCGACGCGGCTTCGGAGGAGCTCCGGCCCGGCGCGGCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS CCA 90 bp | AAGAAGAGGAAGCCCCTGACCATCTGCAGGCTGTGTCAGGGGCTCTaGGTTAGTGCCCAAGATATCTGTGCTGGTGATGAGGGCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: KKRKPLTICRLCQGL*VSAQDICAGDEGAR Trigger: GCGGGCGCCCTCATCACCAGCACAGATATCTTGGGCACTAACCCAGAGCCCCTGACACAGCCTGCAGATGGTCAGGGGCTTCCTCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 90 bp | ATCTGTGCTGGTGATGAGGGCGCCCGCATTGGCTGCCAGAGCTTCTaGAATCAGCACCTCAGGGTGGCTTTTTGCTTTGTGTGCCACTAC | + |
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Preference number: 5 (lower is better) Translates to: ICAGDEGARIGCQSF*NQHLRVAFCFVCHY Trigger: GTAGTGGCACACAAAGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCCCTCATCACCAGCACAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 90 bp | AGTGCCCAAGATATCTGTGCTGGTGATGAGGGCGCCCGCATTGGCTaGCAGAGCTTCTGCAATCAGCACCTCAGGGTGGCTTTTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SAQDICAGDEGARIG*QSFCNQHLRVAFCF Trigger: AAAGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCCCTCATCACCAGCACAGATATCTTGGGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CAA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGGGTGGCTTTTTGCTTaGTGTGCCACTACACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSGWLFA*CATTLS Trigger: GGACAGTGTAGTGGCACACAAAGCAAAAAGCCACCC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CAA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCCCTCAGGGTGGCTTTTaGCTTTGTGTGCCACTACAC | + |
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Preference number: 5 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSPQGGF*LCVPLH Trigger: GTGTAGTGGCACACAAAGCAAAAAGCCACCCTGAGG...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CAA 90 bp | CCAAACCCAGTGAGTAATGGAAGAGGGGTGAGAGATGTGTGCTGTTTTAACAGCGGTAACCGCGGACTTTaGTCATCTTTTCGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PNPVSNGRGVRDVCCFNSGNRGL*SSFRLL Trigger: GAGAAGGCGAAAAGATGACAAAAGTCCGCGGTTACC...GCTGTTAAAACAGCACACATCTCTCACCCCTCTTCCATTACTCACTGGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CAA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGCACTGCAGTATGACTTaGACATCCCTTCAGCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: DFPLINKESQVPQHKTHMHCSMT*TSLQLL Trigger: TAGAAGCTGAAGGGATGTCAAAGTCATACTGCAGTG...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS-3UTR CAA 90 bp | GACTTTCCATTAATAAATAAGGAATCTCAGGTTCCACAACACAAAACACACATGTCTTCTTTCTCTTCCTaGGGATCTTTATCAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: DFPLINKESQVPQHKTHMSSFSS*GSLSVV Trigger: AACAACTGATAAAGATCCCAAGGAAGAGAAAGAAGA...CATGTGTGTTTTGTGTTGTGGAACCTGAGATTCCTTATTTATTAATGGAAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 72 bp | GGGCCGGAGCTCCTCCGAAGCCGCGTCGGCCGCCGCTaGTGGGCCCCCTTCCTGGTCCTGCTGCTCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GPELLRSRVGRR*WAPFLVLLLRG Trigger: TCCCCGGAGCAGCAGGACCAGGAAGGGGGCCCAGCAGCGGCGGCCGACGCGGCTTCGGAGGAGCTCCGGCCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 72 bp | GATATCTGTGCTGGTGATGAGGGCGCCCGCATTGGCTaGCAGAGCTTCTGCAATCAGCACCTCAGGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DICAGDEGARIG*QSFCNQHLRVA Trigger: AGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCCCTCATCACCAGCACAGATATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS GCA 72 bp | GGTGATGAGGGCGCCCGCATTGGCTGCCAGAGCTTCTaGAATCAGCACCTCAGGGTGGCTTTTTGCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GDEGARIGCQSF*NQHLRVAFCFV Trigger: CACAAAGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCCCTCATCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS CCA 72 bp | AAGCCCCTGACCATCTGCAGGCTGTGTCAGGGGCTCTaGGTTAGTGCCCAAGATATCTGTGCTGGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: KPLTICRLCQGL*VSAQDICAGDE Trigger: CTCATCACCAGCACAGATATCTTGGGCACTAACCCAGAGCCCCTGACACAGCCTGCAGATGGTCAGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS CCA 72 bp | TTGGCTGCCAGAGCTTCTGCAATCAGCACCTCAGGGTaGCTTTTTGCTTTGTGTGCCACTACACTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LAARASAISTSG*LFALCATTLSF Trigger: GAAGGACAGTGTAGTGGCACACAAAGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS CAA 72 bp | AAGTTGATCAGTAATTGGTTCTGTCTTGCAGACGAGTaGCAAGGAGCCAGTCTTGGACCTAGAGCTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: KLISNWFCLADE*QGASLGPRAPS Trigger: ACTCGGAGCTCTAGGTCCAAGACTGGCTCCTTGCAACTCGTCTGCAAGACAGAACCAATTACTGATCAACTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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| CDS CAA 90 bp | ATCATAATCAAGTTGATCAGTAATTGGTTCTGTCTTGCAGACGAGTaGCAAGGAGCCAGTCTTGGACCTAGAGCTCCGAGTATTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: IIIKLISNWFCLADE*QGASLGPRAPSILT Trigger: AGTGAGAATACTCGGAGCTCTAGGTCCAAGACTGGCTCCTTGCAACTCGTCTGCAAGACAGAACCAATTACTGATCAACTTGATTATGAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038627.9 |
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