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Pregenerated sensors for ZFP9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072623

Ensembl transcript IDs: ENSMUST00000161170.2

Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTaGGTCAACAAAGGTAGTAAGAGCCTAGAATCTCACTTTGAGCCA +
Preference number: 1 (lower is better)
Translates to: KVRHSEVTWYVHAGI*VNKGSKSLESHFEP
Trigger: TGGCTCAAAGTGAGATTCTAGGCTCTTACTACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 90 bp GATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTaGAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAGG +
Preference number: 1 (lower is better)
Translates to: DVTVISLTEEEGEAQ*SYMVCPCWDLGQQR
Trigger: CCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 90 bp GCAATTCTAGGATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTaGGGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGG +
Preference number: 1 (lower is better)
Translates to: AILGCYCHFSYRGRR*GTVKLHGMSMLGSG
Trigger: CCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACATCCTAGAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CCA 90 bp TCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACATaGTATGTCCATGCTGGGATCTGGGTCAACAAAGGTAGTAAGAGC +
Preference number: 1 (lower is better)
Translates to: SFLLQRKKVRHSEVT*YVHAGIWVNKGSKS
Trigger: GCTCTTACTACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR GCA 90 bp CCCACCGGAGTTCCTCACTGTGAACTCTGCATGTGTAATGCTAGATaGTATGAGAGAAACTTCTGGAAATCCACTTACTTACTGGATTTC +
Preference number: 1 (lower is better)
Translates to: PTGVPHCELCMCNAR*YERNFWKSTYLLDF
Trigger: GAAATCCAGTAAGTAAGTGGATTTCCAGAAGTTTCTCTCATAGCATCTAGCATTACACATGCAGAGTTCACAGTGAGGAACTCCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CCA 90 bp GGAGATACACAGCCAAATCAAATCAAGGCACTAACAGGAATAAGATaGGAGATAAATTCTGGGTTGCCAACCTTTTCACCATGTGATTCG +
Preference number: 1 (lower is better)
Translates to: GDTQPNQIKALTGIR*EINSGLPTFSPCDS
Trigger: CGAATCACATGGTGAAAAGGTTGGCAACCCAGAATTTATCTCCCATCTTATTCCTGTTAGTGCCTTGATTTGATTTGGCTGTGTATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR GCA 90 bp TGCTATGAGAGAAACTTCTGGAAATCCACTTACTTACTGGATTTCTaGCCTGTGTTATTTCTATATGGCACCAGTGTGACTTCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: CYERNFWKSTYLLDF*PVLFLYGTSVTSER
Trigger: TCTTTCAGAAGTCACACTGGTGCCATATAGAAATAACACAGGGCAGAAATCCAGTAAGTAAGTGGATTTCCAGAAGTTTCTCTCATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 90 bp AATAAGATGGGAGATAAATTCTGGGTTGCCAACCTTTTCACCATGTaGTTCGGGAAATACAAATTAATGGGAATACTATCTAATGTCGAG +
Preference number: 1 (lower is better)
Translates to: NKMGDKFWVANLFTM*FGKYKLMGILSNVE
Trigger: CTCGACATTAGATAGTATTCCCATTAATTTGTATTTCCCGAATCACATGGTGAAAAGGTTGGCAACCCAGAATTTATCTCCCATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CCA 90 bp AACCGATGCGGTAAAGTGCTGAGTCAGCAACATCTTAGGTCTGCCTCGCTAGCACGGTTCACCAACCCCTaGCCTTGCCTACTTAGGGTC +
Preference number: 2 (lower is better)
Translates to: NRCGKVLSQQHLRSASLARFTNP*PCLLRV
Trigger: GACCCTAAGTAGGCAAGGCCAGGGGTTGGTGAACCG...TGCTAGCGAGGCAGACCTAAGATGTTGCTGACTCAGCACTTTACCGCATCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp GTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAATTGGGACTAAGAGTGTaGCCGCTGCCTTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: VRHSEVTWYVHAGIWVNKLGLRV*PLPSGH
Trigger: ATGCCCTGAAGGCAGCGGTCACACTCTTAGTCCCAA...TTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CAA 90 bp GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTACTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACTGCT +
Preference number: 2 (lower is better)
Translates to: DPITDGCEPPCGYWE*NSGPLEEQSVLLTA
Trigger: AGCAGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGGTGGCTCACAACCATCTGTAATGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR GCA 90 bp GCTACTGAGCTCAGGAACAACCACAATGGGCTCCAAGAGCAAGACACACAGTTTAAGAAGACTTCTGAGTaGCTGATACCCACCGGAGTT +
Preference number: 2 (lower is better)
Translates to: ATELRNNHNGLQEQDTQFKKTSE*LIPTGV
Trigger: AACTCCGGTGGGTATCAGGCACTCAGAAGTCTTCTT...AAACTGTGTGTCTTGCTCTTGGAGCCCATTGTGGTTGTTCCTGAGCTCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CCA 90 bp CTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTCAGGAACAACCACAATaGGCTCCAAGAGCAAGACAC +
Preference number: 2 (lower is better)
Translates to: LLQRKKVRHSEVTWYVHAQEQPQ*APRARH
Trigger: GTGTCTTGCTCTTGGAGCCCATTGTGGTTGTTCCTG...AGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR GCA 90 bp GGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAGGTACCTCACTGTGAACTCTaGATGTGTAATGCTAGATGC +
Preference number: 2 (lower is better)
Translates to: GTVKLHGMSMLGSGSTKVPHCEL*MCNARC
Trigger: GCATCTAGCATTACACATGCAGAGTTCACAGTGAGG...TACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp AACCGATGCGGTAAAGTGCTGAGTCAGCAACATCTTAGGTCTGCCTCGCTAGCATATATGGCACCAGTGTaGCTTCTGAAAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: NRCGKVLSQQHLRSASLAYMAPV*LLKEKF
Trigger: AAACTTTTCTTTCAGAAGTCACACTGGTGCCATATA...TGCTAGCGAGGCAGACCTAAGATGTTGCTGACTCAGCACTTTACCGCATCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR GCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGCAAAGGGTGAATTCCTaGAGGGGTTCTGAACTTGCG +
Preference number: 2 (lower is better)
Translates to: FTDTVLSASKWQRISTSGQRVNS*RGSELA
Trigger: CGCAAGTTCAGAACCCCTGCAGGAATTCACCCTTTG...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CAA 90 bp AAAGGTAGTAAGAGCCTAGAATCTCACTTTGAGCCACTGGTCATGTaGCCTCTGCTACCCAGAATAGGAAGGGAAAGTCATGAGGTATTT +
Preference number: 2 (lower is better)
Translates to: KGSKSLESHFEPLVM*PLLPRIGRESHEVF
Trigger: AAATACCTCATGACTTTCCCTTCCTATTCTGGGTAGCAGAGGCAACATGACCAGTGGCTCAAAGTGAGATTCTAGGCTCTTACTACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp GCTACTGAGCTCAGGAACAACCACAATGGGCTCCAAGAGCAAGACACACAGTTTTCCATCTTTTTAAGATaGGTGCAACCTTGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: ATELRNNHNGLQEQDTQFSIFLR*VQPCKK
Trigger: CTTCTTACAAGGTTGCACTCATCTTAAAAAGATGGA...AAACTGTGTGTCTTGCTCTTGGAGCCCATTGTGGTTGTTCCTGAGCTCAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CCA 90 bp CAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCTGTGTTTTGCTCTTTATGAGAGAAACTTCTaGAAATCCACTTACTTACTG +
Preference number: 2 (lower is better)
Translates to: QSVLLTAEPSLQPLCFALYERNF*KSTYLL
Trigger: CAGTAAGTAAGTGGATTTCCAGAAGTTTCTCTCATA...AAGAGCAAAACACAGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp ATAAGGAAATACTGCTGCTTTAGAAACAGCTCTGACCGCTCAAATGCATGTCCATTCTTACACAGCTACTaGGCTCAGGAACAACCACAA +
Preference number: 2 (lower is better)
Translates to: IRKYCCFRNSSDRSNACPFLHSY*AQEQPQ
Trigger: TTGTGGTTGTTCCTGAGCTCAGTAGCTGTGTAAGAA...TGGACATGCATTTGAGCGGTCAGAGCTGTTTCTAAAGCAGCAGTATTTCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR GCA 90 bp GTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAATGTGTAATGCTAGATaGTATGAGAGAAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: VRHSEVTWYVHAGIWVNKMCNAR*YERNFW
Trigger: CCAGAAGTTTCTCTCATAGCATCTAGCATTACACAT...TTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGGTAAGTGCCCAGAGATaGACAAAAAGACACACTGTG +
Preference number: 2 (lower is better)
Translates to: FTDTVLSASKWQRISTSGVSAQR*TKRHTV
Trigger: CACAGTGTGTCTTTTTGTCCATCTCTGGGCACTTAC...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp TTATGTTTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCAATGCATGTCCAAGCTaGAGTTCAGCCCATCACAGT +
Preference number: 2 (lower is better)
Translates to: LCFTDTVLSASKWQRISTNACPS*SSAHHS
Trigger: ACTGTGATGGGCTGAACTTCAGCTTGGACATGCATT...GGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR TCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGTTTGCAATCTATGCATaGATGCCCTTCCATCTTTTT +
Preference number: 2 (lower is better)
Translates to: FTDTVLSASKWQRISTSGFAIYA*MPFHLF
Trigger: AAAAAGATGGAAGGGCATTCATGCATAGATTGCAAA...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGAATCCACTTACTTACTaGATTTCTGCCCTGTGTTAT +
Preference number: 2 (lower is better)
Translates to: FTDTVLSASKWQRISTSGNPLTY*ISALCY
Trigger: ATAACACAGGGCAGAAATCCAGTAAGTAAGTGGATT...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR GCA 90 bp AGCTGTCTTCAGACACATCAGAAAAGAGCATCAGATCCCATTACAGATGGTTGTCAATCTATGCATGAATaGCCTTCCATCTTTTTAAGA +
Preference number: 2 (lower is better)
Translates to: SCLQTHQKRASDPITDGCQSMHE*PSIFLR
Trigger: TCTTAAAAAGATGGAAGGGCATTCATGCATAGATTG...ACAACCATCTGTAATGGGATCTGATGCTCTTTTCTGATGTGTCTGAAGACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CCA 72 bp CTTACAGGCTACAAAACGGGCTGTGGATCTGGCCGATaGGCTGCGGTTCACCAACCCCTGGCCTTGCCTACT +
Preference number: 3 (lower is better)
Translates to: LTGYKTGCGSGR*AAVHQPLALPT
Trigger: AGTAGGCAAGGCCAGGGGTTGGTGAACCGCAGCCCATCGGCCAGATCCACAGCCCGTTTTGTAGCCTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CAA 90 bp AACCGATGCGGTAAAGTGCTGAGTCAGCAACATCTTAGGTCTGCCTCGCTAGCAGAGCCACTGGTCATGTaGCCTCTGCTACCCAGAATA +
Preference number: 3 (lower is better)
Translates to: NRCGKVLSQQHLRSASLAEPLVM*PLLPRI
Trigger: TATTCTGGGTAGCAGAGGCAACATGACCAGTGGCTC...TGCTAGCGAGGCAGACCTAAGATGTTGCTGACTCAGCACTTTACCGCATCGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp AGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCCCTGTGTTTTGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: RTSGRAVSALNC*AISPAPVFCSF
Trigger: AAAAGAGCAAAACACAGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp CAGATGGTTGTGAGCCACCATGTGGTTACTGGGAATTaGACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: QMVVSHHVVTGN*TQDLWKSSQCS
Trigger: AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGGTGGCTCACAACCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp AAAACAACCTTGGAACTGGCATTGGGACTAAGAGTGTaGCCGCTGCCTTCAGGGCATTTTGTTGAAGGCGGT +
Preference number: 3 (lower is better)
Translates to: KTTLELALGLRV*PLPSGHFVEGG
Trigger: ACCGCCTTCAACAAAATGCCCTGAAGGCAGCGGTCACACTCTTAGTCCCAATGCCAGTTCCAAGGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR-3UTR CAA 90 bp GGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAGGTAGGCTCTCCTATCTGTTaGCAATCTATGCATGAATGC +
Preference number: 3 (lower is better)
Translates to: GTVKLHGMSMLGSGSTKVGSPIC*QSMHEC
Trigger: GCATTCATGCATAGATTGCAAACAGATAGGAGAGCC...TACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp GTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTaGAGTTACATGGTATGTCCATGCTGGGATCTGGGT +
Preference number: 3 (lower is better)
Translates to: VISLTEEEGEAQ*SYMVCPCWDLG
Trigger: ACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CCA 72 bp CACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTaGGTCAACAAAGGTAGTAAGAGCCTAGAATCTCAC +
Preference number: 3 (lower is better)
Translates to: HSEVTWYVHAGI*VNKGSKSLESH
Trigger: GTGAGATTCTAGGCTCTTACTACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp GGATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTaGGGCACAGTGAAGTTACATGGTATGTCCATGCTG +
Preference number: 3 (lower is better)
Translates to: GCYCHFSYRGRR*GTVKLHGMSML
Trigger: CAGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp GTTGCCTCTGCTACCCAGAATAGGAAGGGAAAGTCATaGGGTATTTTTCATACACAATACAAACACAGATGC +
Preference number: 3 (lower is better)
Translates to: VASATQNRKGKS*GIFHTQYKHRC
Trigger: GCATCTGTGTTTGTATTGTGTATGAAAAATACCTCATGACTTTCCCTTCCTATTCTGGGTAGCAGAGGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR GCA 72 bp TGTCGAGTTCTTATGTTTTACAGACACTGTTCTGAGTaGTTCAAAATGGCAACGTATTTCAACCTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: CRVLMFYRHCSE*FKMATYFNLRA
Trigger: TGCCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAAACATAAGAACTCGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR GCA 72 bp AGAAACTTCTGGAAATCCACTTACTTACTGGATTTCTaGCCTGTGTTATTTCTATATGGCACCAGTGTGACT +
Preference number: 3 (lower is better)
Translates to: RNFWKSTYLLDF*PVLFLYGTSVT
Trigger: AGTCACACTGGTGCCATATAGAAATAACACAGGGCAGAAATCCAGTAAGTAAGTGGATTTCCAGAAGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR GCA 72 bp GTTCCTCACTGTGAACTCTGCATGTGTAATGCTAGATaGTATGAGAGAAACTTCTGGAAATCCACTTACTTA +
Preference number: 3 (lower is better)
Translates to: VPHCELCMCNAR*YERNFWKSTYL
Trigger: TAAGTAAGTGGATTTCCAGAAGTTTCTCTCATAGCATCTAGCATTACACATGCAGAGTTCACAGTGAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR TCA 72 bp GGAGATAAATTCTGGGTTGCCAACCTTTTCACCATGTaGTTCGGGAAATACAAATTAATGGGAATACTATCT +
Preference number: 3 (lower is better)
Translates to: GDKFWVANLFTM*FGKYKLMGILS
Trigger: AGATAGTATTCCCATTAATTTGTATTTCCCGAATCACATGGTGAAAAGGTTGGCAACCCAGAATTTATCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp CTACAAAACGGGCTGTGGATCTGGCCGATGGGCTGCGGTTCACCAACCCCTGGCGTGCACGGTGAGGGCTaGCTTCTGGTAGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LQNGLWIWPMGCGSPTPGVHGEG*LLVEAV
Trigger: AACTGCTTCTACCAGAAGTCAGCCCTCACCGTGCAC...GCCAGGGGTTGGTGAACCGCAGCCCATCGGCCAGATCCACAGCCCGTTTTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp CTACAAAACGGGCTGTGGATCTGGCCGATGGGCTGCGGTTCACCAACCCCTGGCCAGGAGCTTCCATTCTaGTTTGGAGAATTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LQNGLWIWPMGCGSPTPGQELPF*FGEFHS
Trigger: GCTGTGGAATTCTCCAAAGCAGAATGGAAGCTCCTG...GCCAGGGGTTGGTGAACCGCAGCCCATCGGCCAGATCCACAGCCCGTTTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp CTACAAAACGGGCTGTGGATCTGGCCGATGGGCTGCGGTTCACCAACCCCTGGCGTGCACCAGGAGGTATaGCTTCACATAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LQNGLWIWPMGCGSPTPGVHQEV*LHIEEL
Trigger: AAGTTCTTCTATGTGAAGGCATACCTCCTGGTGCAC...GCCAGGGGTTGGTGAACCGCAGCCCATCGGCCAGATCCACAGCCCGTTTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp CAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCTGTGTTTTGCTCTTTTCGCTGGTGCACGGTaGGGGCTGACTTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSVLLTAEPSLQPLCFALFAGAR*GLTSGR
Trigger: TCTACCAGAAGTCAGCCCTCACCGTGCACCAGCGAA...AAGAGCAAAACACAGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp AGCTGTCTTCAGACACATCAGAAAAGAGCATCAGATCCCATTACAGATGGTTGTCCAGCCTGTTGCTCCTaGTGTTTGGCTCTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SCLQTHQKRASDPITDGCPACCS*CLALGS
Trigger: CGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGG...ACAACCATCTGTAATGGGATCTGATGCTCTTTTCTGATGTGTCTGAAGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp GGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAGGTACGGGTGGGAGTTTTCTaGTGCTTTGTAAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GTVKLHGMSMLGSGSTKVRVGVF*CFVSSP
Trigger: AGGAGAACTTACAAAGCATCAGAAAACTCCCACCCG...TACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
3UTR CAA 72 bp AAGAGCCTAGAATCTCACTTTGAGCCACTGGTCATGTaGCCTCTGCTACCCAGAATAGGAAGGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KSLESHFEPLVM*PLLPRIGRESH
Trigger: ATGACTTTCCCTTCCTATTCTGGGTAGCAGAGGCAACATGACCAGTGGCTCAAAGTGAGATTCTAGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp CTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTTTGGAGTGTGTCTTCTaGTGTGATGTGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: LLQRKKVRHSEVTWYVHALECVF*CDVSCD
Trigger: GTCACAACTCACATCACATCAGAAGACACACTCCAA...AGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp TCCATATTTAGAAGGTTCTCCCTCTGTGTGTATTACAGCCAAAGGGTGAATTCCGTGTGTGTTTTCTGGTaGACCAGGAGGTATGCCTTC +
Preference number: 4 (lower is better)
Translates to: SIFRRFSLCVYYSQRVNSVCVFW*TRRYAF
Trigger: GAAGGCATACCTCCTGGTGCACCAGAAAACACACAC...GGAATTCACCCTTTGGCTGTAATACACACAGAGGGAGAACCTTCTAAATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp ATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACAGTGTGTGTTTTCTGGTaGTCTGTGAGGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MLLSFLLQRKKVRHSEVTVCVFW*SVRCGF
Trigger: GAAGCCACACCTCACAGAGCACCAGAAAACACACAC...TGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGAGCTTTCATGCCGGGTaGGAGTTTTCTGATGCTTTG +
Preference number: 4 (lower is better)
Translates to: FTDTVLSASKWQRISTSGSFHAG*EFSDAL
Trigger: CAAAGCATCAGAAAACTCCCACCCGGCATGAAAGCT...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp ATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACATTTTCTGGTGCTCTGTaGGGTGTGGCTTCTGATAGA +
Preference number: 4 (lower is better)
Translates to: MLLSFLLQRKKVRHSEVTFSGAL*GVASDR
Trigger: TCTATCAGAAGCCACACCTCACAGAGCACCAGAAAA...TGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CCA 90 bp ATAAGGAAATACTGCTGCTTTAGAAACAGCTCTGACCGCTCAAATGCATGTCCAGTGCTCTGTGAGGTGTaGCTTCTGATAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: IRKYCCFRNSSDRSNACPVLCEV*LLIEGF
Trigger: AAATCCTTCTATCAGAAGCCACACCTCACAGAGCAC...TGGACATGCATTTGAGCGGTCAGAGCTGTTTCTAAAGCAGCAGTATTTCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp GAGTACACTGTAGCTGTCTTCAGACACATCAGAAAAGAGCATCAGATCCCATTAGTTTTCTCTGATGGATaGCAAAATGGGACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: EYTVAVFRHIRKEHQIPLVFSDG*QNGTSE
Trigger: CTCAGAAGTCCCATTTTGTCATCCATCAGAGAAAAC...TAATGGGATCTGATGCTCTTTTCTGATGTGTCTGAAGACAGCTACAGTGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp ATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACAAAGTTCTCCTTTCCTTaGATTTCCAGCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: MLLSFLLQRKKVRHSEVTKFSFP*ISSLLL
Trigger: GAGCAACAGGCTGGAAATGCAAGGAAAGGAGAACTT...TGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp TTTACAGACACTGTTCTGAGTGCTTCAAAATGGCAACGTATTTCAACCTCAGGGTCACAGAGAAAGATTTaGCACACTCTGCACATTCGT +
Preference number: 4 (lower is better)
Translates to: FTDTVLSASKWQRISTSGSQRKI*HTLHIR
Trigger: ACGAATGTGCAGAGTGTGGCAAATCTTTCTCTGTGA...CCCTGAGGTTGAAATACGTTGCCATTTTGAAGCACTCAGAACAGTGTCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CCA 90 bp GAGTACACTGTAGCTGTCTTCAGACACATCAGAAAAGAGCATCAGATCCCATTACTTTGCAATCACACTTaGCTTAACCACACGATAACC +
Preference number: 4 (lower is better)
Translates to: EYTVAVFRHIRKEHQIPLLCNHT*LNHTIT
Trigger: GGTTATCGTGTGGTTAAGCCAAGTGTGATTGCAAAG...TAATGGGATCTGATGCTCTTTTCTGATGTGTCTGAAGACAGCTACAGTGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR TCA 90 bp TCCATATTTAGAAGGTTCTCCCTCTGTGTGTATTACAGCCAAAGGGTGAATTCCCTTTCTGATGGATTGTaGGGTCTTCGTTCTTATAGA +
Preference number: 4 (lower is better)
Translates to: SIFRRFSLCVYYSQRVNSLSDGL*GLRSYR
Trigger: TCTATAAGAACGAAGACCTCACAATCCATCAGAAAG...GGAATTCACCCTTTGGCTGTAATACACACAGAGGGAGAACCTTCTAAATATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CCA 90 bp ATGTTACTGTCATTTCTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACAGCTTCCATTCTGCTTTaGAGAATTCCACAGCAACAT +
Preference number: 4 (lower is better)
Translates to: MLLSFLLQRKKVRHSEVTASILL*RIPQQH
Trigger: ATGTTGCTGTGGAATTCTCCAAAGCAGAATGGAAGC...TGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAGAAATGACAGTAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR GCA 90 bp AGCTGTCTTCAGACACATCAGAAAAGAGCATCAGATCCCATTACAGATGGTTGTTCCTTTCTTCAACTTTaGAATCACACTTGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: SCLQTHQKRASDPITDGCSFLQL*NHTWLN
Trigger: GTTAAGCCAAGTGTGATTGCAAAGTTGAAGAAAGGA...ACAACCATCTGTAATGGGATCTGATGCTCTTTTCTGATGTGTCTGAAGACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS CCA 90 bp CTCCTTTCCTTGCATTTCCAGCCTGTTGCTCCTGATGTTTGGCTCTaGGGTCGTGAGCGGTCCGCCGCTTATCACCACGGCTCTTACGGA +
Preference number: 5 (lower is better)
Translates to: LLSLHFQPVAPDVWL*GRERSAAYHHGSYG
Trigger: TCCGTAAGAGCCGTGGTGATAAGCGGCGGACCGCTCACGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCAAGGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CAA 90 bp GGCACAGTGAAGTTACATGGTATGTCCATGCTGGGATCTGGGTCAACAAAGGTAAGCTTCCATTCTGCTTaGGAGAATTCCACAGCAACA +
Preference number: 5 (lower is better)
Translates to: GTVKLHGMSMLGSGSTKVSFHSA*ENSTAT
Trigger: TGTTGCTGTGGAATTCTCCAAAGCAGAATGGAAGCT...TACCTTTGTTGACCCAGATCCCAGCATGGACATACCATGTAACTTCACTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CAA 90 bp ATAAGGAAATACTGCTGCTTTAGAAACAGCTCTGACCGCTCAAATGCATGTCCATGCATTTCCAGCCTGTaGCTCCTGATGTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: IRKYCCFRNSSDRSNACPCISSL*LLMFGS
Trigger: AGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCA...TGGACATGCATTTGAGCGGTCAGAGCTGTTTCTAAAGCAGCAGTATTTCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS-3UTR CAA 90 bp CTCTTACAGAGGAAGAAGGTGAGGCACAGTGAAGTTACATGGTATGTCCATGCTTTCACAGAGAAAGATTaGCCACACTCTGCACATTCG +
Preference number: 5 (lower is better)
Translates to: LLQRKKVRHSEVTWYVHAFTEKD*PHSAHS
Trigger: CGAATGTGCAGAGTGTGGCAAATCTTTCTCTGTGAA...AGCATGGACATACCATGTAACTTCACTGTGCCTCACCTTCTTCCTCTGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS CCA 72 bp TTGCATTTCCAGCCTGTTGCTCCTGATGTTTGGCTCTaGGGTCGTGAGCGGTCCGCCGCTTATCACCACGGC +
Preference number: 6 (lower is better)
Translates to: LHFQPVAPDVWL*GRERSAAYHHG
Trigger: GCCGTGGTGATAAGCGGCGGACCGCTCACGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS CCA 72 bp CTTTCCTTGCATTTCCAGCCTGTTGCTCCTGATGTTTaGCTCTGGGGTCGTGAGCGGTCCGCCGCTTATCAC +
Preference number: 6 (lower is better)
Translates to: LSLHFQPVAPDV*LWGRERSAAYH
Trigger: GTGATAAGCGGCGGACCGCTCACGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCAAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS CAA 90 bp TTTCTGATGCTTTGTAAGTTCTCCTTTCCTTGCATTTCCAGCCTGTaGCTCCTGATGTTTGGCTCTGGGGTCGTGAGCGGTCCGCCGCTT +
Preference number: 6 (lower is better)
Translates to: FLMLCKFSFPCISSL*LLMFGSGVVSGPPL
Trigger: AAGCGGCGGACCGCTCACGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCAAGGAAAGGAGAACTTACAAAGCATCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS CAA 72 bp CTTTGTAAGTTCTCCTTTCCTTGCATTTCCAGCCTGTaGCTCCTGATGTTTGGCTCTGGGGTCGTGAGCGGT +
Preference number: 6 (lower is better)
Translates to: LCKFSFPCISSL*LLMFGSGVVSG
Trigger: ACCGCTCACGACCCCAGAGCCAAACATCAGGAGCAACAGGCTGGAAATGCAAGGAAAGGAGAACTTACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2
CDS TCA 72 bp ATGTTTTATCTCTGGTATGGACTTTCTGATGGATTGTaGGGTCTTCGTTCTTATAGAAAGCTTGTCCACATT +
Preference number: 6 (lower is better)
Translates to: MFYLWYGLSDGL*GLRSYRKLVHI
Trigger: AATGTGGACAAGCTTTCTATAAGAACGAAGACCTCACAATCCATCAGAAAGTCCATACCAGAGATAAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161170.2