Pregenerated sensors for ZFP882 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089857Ensembl transcript IDs: ENSMUST00000110002.8, ENSMUST00000126607.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACTGGACAACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTaGTATGGTGTGTTCTTTCATGTGTGTGGTGTGCATGATTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: YWTTEDLQVSSNGGS*YGVFFHVCGVHDCV Trigger: CACACAATCATGCACACCACACACATGAAAGAACACACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR TCA 90 bp | TACAAACTGAGACATCTCCTCATCTCCATAGTGGTTTCTGAGAAGTaGACTGAGACAAGTAGAGATAATCTCACATGCTTTGCATCGATA | + |
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Preference number: 1 (lower is better) Translates to: YKLRHLLISIVVSEK*TETSRDNLTCFASI Trigger: TATCGATGCAAAGCATGTGAGATTATCTCTACTTGTCTCAGTTCACTTCTCAGAAACCACTATGGAGATGAGGAGATGTCTCAGTTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR TCA 90 bp | TCCACTTTAGTTTTTGAGAACTCTCTTATTGGACCTGAACTGACTTaGTGCCCAAAGTTGTCCAGTGATTTGAAGAATGTTGATGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: STLVFENSLIGPELT*CPKLSSDLKNVDAG Trigger: TCCTGCATCAACATTCTTCAAATCACTGGACAACTTTGGGCATCAAGTCAGTTCAGGTCCAATAAGAGAGTTCTCAAAAACTAAAGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR TCA 90 bp | CTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCTCTAGTTGTCCAGTGATTTaGAGAATGTTGATGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTHSVDQGGLELRNPPASSCPVI*RMLMQE Trigger: CTCCTGCATCAACATTCTTCAAATCACTGGACAACT...AGAGGCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGCATGATTGTGTGGATGAGTGTTCATATGTGTGGGTACACACTGTACTTAGGGTCTCTTGTCTCTaGCTCCCTAGCACTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: GVHDCVDECSYVWVHTVLRVSCL*LPSTGH Trigger: GTGTCCAGTGCTAGGGAGGCAGAGACAAGAGACCCT...AAGTACAGTGTGTACCCACACATATGAACACTCATCCACACAATCATGCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCGGACAACTGAAGACTTaGAGGTTTCTTCTAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTNSLCRPGWPRTQKSSCGQLKT*RFLLME Trigger: CTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCC...GCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR TCA 90 bp | CTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCTCTCTCCACTTTAGTTTTTaGGAACTCTCTTATTGGACC | + |
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Preference number: 2 (lower is better) Translates to: LTHSVDQGGLELRNPPASLHFSF*ELSYWT Trigger: GGTCCAATAAGAGAGTTCTCAAAAACTAAAGTGGAG...AGAGGCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCTCTTTTGCTAGAGAGATCTaGAGCGTTCCTTTAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LTHSVDQGGLELRNPPASFAREI*SVPLVY Trigger: ATAAACTAAAGGAACGCTCCAGATCTCTCTAGCAAA...AGAGGCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCAGACTTTTGTGTGTTaGGTGTCTTCCTTAATCATT | + |
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Preference number: 2 (lower is better) Translates to: GTNSLCRPGWPRTQKSSCQTFVC*VSSLII Trigger: AATGATTAAGGAAGACACCCAACACACAAAAGTCTG...GCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGACAACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGGGACCTGAACTGACTTaGTGCCCAAAGTTGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TGQLKTCRFLLMEVLDMVGPELT*CPKLSS Trigger: ACTGGACAACTTTGGGCATCAAGTCAGTTCAGGTCC...CACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGACAACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGTCCATACATGTGCATTaGCATCATGGACCAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TGQLKTCRFLLMEVLDMVSIHVH*HHGPAN Trigger: GTTAGCTGGTCCATGATGGCAATGCACATGTATGGA...CACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCTTCACATTAGTTGTGTTAACAGAATCGTATTGCATCAGACTTTGACAAAGCTAAGAGCCATGTaGCTAATCAGTGGGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QALHISCVNRIVLHQTLTKLRAM*LISGQF Trigger: AAACTGCCCACTGATTAGTCACATGGCTCTTAGCTT...TGTCAAAGTCTGATGCAATACGATTCTGTTAACACAACTAATGTGAAGAGCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCTTCACATTAGTTGTGTTAACAGAATCGTATTGCATCAGACTTTGACAGTGTGCATGATTGTGTaGATGAGTGTTCATATGTGT | + |
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Preference number: 2 (lower is better) Translates to: QALHISCVNRIVLHQTLTVCMIV*MSVHMC Trigger: ACACATATGAACACTCATCCACACAATCATGCACAC...TGTCAAAGTCTGATGCAATACGATTCTGTTAACACAACTAATGTGAAGAGCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR CAA 90 bp | CTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGGAAAATCCAGACTTTaGTGTGTTGGGTGTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LTHSVDQGGLELRNPPASGKSRL*CVGCLP Trigger: AGGAAGACACCCAACACACAAAAGTCTGGATTTTCC...AGAGGCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR CCA 72 bp | GGTGTGCATGATTGTGTGGATGAGTGTTCATATGTGTaGGTACACACTGTACTTGCACATAGAGGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVHDCVDECSYV*VHTVLAHRGQR Trigger: TCTCTGGCCTCTATGTGCAAGTACAGTGTGTACCCACACATATGAACACTCATCCACACAATCATGCACACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR-3UTR CAA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCATTATACCATCATGTTaGCTAGAGAGATCTGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: LFRSTYKCATDKPSSKLCIIPSC*LERSGA Trigger: CGCTCCAGATCTCTCTAGCAAACATGATGGTATAAT...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR TCA 72 bp | ACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTaGTATGGTGTGTTCTTTCATGTGTGTGGTGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TEDLQVSSNGGS*YGVFFHVCGVH Trigger: ATGCACACCACACACATGAAAGAACACACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| 3UTR CCA 72 bp | CAAGAGCCTAGTAGGAAAATCCAGACTTTTGTGTGTTaGGTGTCTTCCTTAATCATTCTCCACTTTAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: QEPSRKIQTFVC*VSSLIILHFSF Trigger: AAAACTAAAGTGGAGAATGATTAAGGAAGACACCCAACACACAAAAGTCTGGATTTTCCTACTAGGCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | GGAACTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCGGGAACAGTGATCACTaGAGGCTATCCCACACTGAT | + |
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Preference number: 4 (lower is better) Translates to: GTNSLCRPGWPRTQKSSCGNSDH*RLSHTD Trigger: ATCAGTGTGGGATAGCCTTCAGTGATCACTGTTCCC...GCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR GCA 90 bp | GTCTCTTGTCTCTGCCTCCCTAGCACTGGACACAGGGGTATGCCATCATGTCTGCGCACTTCTTACATGTaGCTGGTTTCTCTGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: VSCLCLPSTGHRGMPSCLRTSYM*LVSLCI Trigger: AATGCACAGAGAAACCAGGCACATGTAAGAAGTGCG...CAGACATGATGGCATACCCCTGTGTCCAGTGCTAGGGAGGCAGAGACAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR GCA 90 bp | GTCTCTTGTCTCTGCCTCCCTAGCACTGGACACAGGGGTATGCCATCATGTCTGCTTTCCCACACACCCTaGATAGACAAGGTTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: VSCLCLPSTGHRGMPSCLLSHTP*IDKVSI Trigger: GATTGAAACCTTGTCTATGCAGGGTGTGTGGGAAAG...CAGACATGATGGCATACCCCTGTGTCCAGTGCTAGGGAGGCAGAGACAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | CAGGATCTCATGCTTCTATGGCAAGGACTATACAAACTGAGACATCTCCTCATCGAGAGCCCTGACGACTaGACGCTTTCCCACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QDLMLLWQGLYKLRHLLIESPDD*TLSHTA Trigger: AGCTGTGTGGGAAAGCGTTCAGTCGTCAGGGCTCTC...GATGAGGAGATGTCTCAGTTTGTATAGTCCTTGCCATAGAAGCATGAGATCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | GGAACTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCATTCTTTCATGCCCCTaGACAAAACTGTGTCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: GTNSLCRPGWPRTQKSSCILSCP*TKLCLL Trigger: TAGCAGACACAGTTTTGTTCAGGGGCATGAAAGAAT...GCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | CTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGTTTTCTCTTCATTGTaGGTCTTCATATGTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTHSVDQGGLELRNPPASVFSSL*VFICSR Trigger: TCTGGAACATATGAAGACTCACAATGAAGAGAAAAC...AGAGGCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGTGTTCTTTCGGGAACTGTGAAACGTaGAGGCTTTCCCACACACCC | + |
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Preference number: 4 (lower is better) Translates to: LKTCRFLLMEVLDMVCSFGNCET*RLSHTP Trigger: GGGTGTGTGGGAAAGCCTTCACGTTTCACAGTTCCC...GAAAGAACACACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CCA 90 bp | CATGATTGTGTGGATGAGTGTTCATATGTGTGGGTACACACTGTACTTGCACATCTATGGGTCCTTTCATaGCGACGAAGGCCACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: HDCVDECSYVWVHTVLAHLWVLS*RRRPLE Trigger: TTCCAGTGGCCTTCGTCGCCATGAAAGGACCCATAG...ATGTGCAAGTACAGTGTGTACCCACACATATGAACACTCATCCACACAATCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCGCCTTCTCTCCCCTGTaGATCTGTTCATGGTATCGA | + |
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Preference number: 4 (lower is better) Translates to: LFRSTYKCATDKPSSKLCAFSPL*ICSWYR Trigger: TCGATACCATGAACAGATTCACAGGGGAGAGAAGGC...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | ACTGGACAACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGGGGAACTGTGATCAGTaGAGGCTTTTGCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: TGQLKTCRFLLMEVLDMVGNCDQ*RLLHRI Trigger: AATTCTGTGCAAAAGCCTTCACTGATCACAGTTCCC...CACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CCA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCCTGTGTAGCCTCTTTTaGGAAGAATTCAGCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LFRSTYKCATDKPSSKLCLCSLF*EEFSKA Trigger: GGCTTTGCTGAATTCTTCCCAAAAGAGGCTACACAG...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CCA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCCTTCTTACATGTGCCTaGTTTCTCTGTGCATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFRSTYKCATDKPSSKLCLLTCA*FLCAFL Trigger: CAAGAATGCACAGAGAAACCAGGCACATGTAAGAAG...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | ACTGGACAACTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGGTTATTATGTGCTGTTaGATACCAGCAAGAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: TGQLKTCRFLLMEVLDMVVIMCC*IPARVK Trigger: TTTGACTCTTGCTGGTATTCAACAGCACATAATAAC...CACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAGTTGTCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTCTTCACATTAGTTGTGTTAACAGAATCGTATTGCATCAGACTTTGACAAGCTGTTCTCTGGTGTaGGTTCTTTTATGTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: QALHISCVNRIVLHQTLTSCSLV*VLLCVK Trigger: CTTGACACATAAAAGAACTCACACCAGAGAACAGCT...TGTCAAAGTCTGATGCAATACGATTCTGTTAACACAACTAATGTGAAGAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGACTTGCAGGTTTCTTCTAATGGAGGTTCTTGATATGGTGTGTTCTTTCATAGTCAGTCTGAACTaGAATGGGAGGAATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LKTCRFLLMEVLDMVCSFIVSLN*NGRNFS Trigger: AGAAAAATTCCTCCCATTTCAGTTCAGACTGACTAT...GAAAGAACACACCATATCAAGAACCTCCATTAGAAGAAACCTGCAAGTCTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CCA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCTGTTCCAGAAAACTTTaGGGAGAACTAAAGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LFRSTYKCATDKPSSKLCCSRKL*GELKNF Trigger: GAAATTCTTTAGTTCTCCCCAAAGTTTTCTGGAACA...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CAA 90 bp | GGAACTAACTCACTCTGTAGACCAGGGTGGCCTCGAACTCAGAAATCCTCCTGCGATTCTTTCATGGCGTaGAAGAGAACTGTGATAAGT | + |
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Preference number: 5 (lower is better) Translates to: GTNSLCRPGWPRTQKSSCDSFMA*KRTVIS Trigger: ACTTATCACAGTTCTCTTCAACGCCATGAAAGAATC...GCAGGAGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAGAGTGAGTTAGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS-3UTR CAA 90 bp | TTATTCAGATCTACCTACAAATGTGCCACTGACAAACCCTCCTCTAAACTGTGCAGTCTTCTTGCTTTTTaGCTATGGCAGCCAAATTCC | + |
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Preference number: 5 (lower is better) Translates to: LFRSTYKCATDKPSSKLCSLLAF*LWQPNS Trigger: GGAATTTGGCTGCCATAGCAAAAAAGCAAGAAGACT...GCACAGTTTAGAGGAGGGTTTGTCAGTGGCACATTTGTAGGTAGATCTGAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS CAA 72 bp | TCCCTCCAAGCAAAGCCCTTCTCTTCTAGCCACCGCTaGACACGTTTCACACTTTTTATCTCGGGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLQAKPFSSSHR*TRFTLFISGLL Trigger: GAGAAGGCCCGAGATAAAAAGTGTGAAACGTGTCAAGCGGTGGCTAGAAGAGAAGGGCTTTGCTTGGAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126607.2 |
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| CDS GCA 72 bp | ATTTCCCGCACTTCTTACATGTGCCTGGTTTCTCTGTaGATTCTTGACTCTCACATAGTTTATAGTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: ISRTSYMCLVSL*ILDSHIVYSQS Trigger: AGACTGACTATAAACTATGTGAGAGTCAAGAATGCACAGAGAAACCAGGCACATGTAAGAAGTGCGGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS TCA 72 bp | TATGGCTCATCTCCATTATGTGTTATTATGTGCTGTTaGATACCAGCAAGAGTCAAAGAGTCTTTCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: YGSSPLCVIMCC*IPARVKESFPL Trigger: AAGTGGGAAAGACTCTTTGACTCTTGCTGGTATTCAACAGCACATAATAACACATAATGGAGATGAGCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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| CDS CAA 72 bp | ATATGGCTCATCTCCATTATGTGTTATTATGTGCTGTaGAATACCAGCAAGAGTCAAAGAGTCTTTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: IWLISIMCYYVL*NTSKSQRVFPT Trigger: AGTGGGAAAGACTCTTTGACTCTTGCTGGTATTCAACAGCACATAATAACACATAATGGAGATGAGCCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110002.8 |
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